RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 IFNA4P05014 189 aa6.54□□□□□ -1.36
PDLIM5-213ENST00000509357 OR10J1P30954 320 aa6.54□□□□□ -1.36
PDLIM5-213ENST00000509357 TAS2R30P59541 319 aa6.54□□□□□ -1.36
PDLIM5-213ENST00000509357 S100A10P60903 97 aa6.54□□□□□ -1.36
PDLIM5-213ENST00000509357 RRAS2P62070 204 aaPredicted RBP6.54□□□□□ -1.36
PDLIM5-213ENST00000509357 NHLH2Q02577 135 aa6.54□□□□□ -1.36
PDLIM5-213ENST00000509357 OR8G2PQ6IF36 304 aa6.54□□□□□ -1.36
PDLIM5-213ENST00000509357 TMEM252Q8N6L7 170 aa6.54□□□□□ -1.36
PDLIM5-213ENST00000509357 THAP8Q8NA92 274 aa6.54□□□□□ -1.36
PDLIM5-213ENST00000509357 RAB40CQ96S21 281 aa6.54□□□□□ -1.36
PDLIM5-213ENST00000509357 SPAG8Q99932 426 aaPredicted RBP6.54□□□□□ -1.36
PDLIM5-213ENST00000509357 GINS3Q9BRX5 216 aa6.54□□□□□ -1.36
PDLIM5-213ENST00000509357 LYRM2Q9NU23 88 aaPredicted RBP6.54□□□□□ -1.36
PDLIM5-213ENST00000509357 PAIP2BQ9ULR5 123 aaKnown RBP6.54□□□□□ -1.36
PDLIM5-213ENST00000509357 STRAPQ9Y3F4 350 aaKnown RBP6.54□□□□□ -1.36
PDLIM5-213ENST00000509357 PUS1Q9Y606 427 aaKnown RBP eCLIP6.54□□□□□ -1.36
PDLIM5-213ENST00000509357 IGKV3-7A0A075B6H7 116 aa6.53□□□□□ -1.36
PDLIM5-213ENST00000509357 PIGBOS1A0A0B4J2F0 54 aa6.53□□□□□ -1.36
PDLIM5-213ENST00000509357 IGHV3-66A0A0C4DH42 116 aa6.53□□□□□ -1.36
PDLIM5-213ENST00000509357 RBMY1BA6NDE4 496 aaKnown RBP6.53□□□□□ -1.36
PDLIM5-213ENST00000509357 RBMY1EA6NEQ0 496 aaKnown RBP6.53□□□□□ -1.36
PDLIM5-213ENST00000509357 OR4C46A6NHA9 309 aa6.53□□□□□ -1.36
PDLIM5-213ENST00000509357 K7EMT4 169 aa6.53□□□□□ -1.36
PDLIM5-213ENST00000509357 RBMY1DP0C7P1 496 aaKnown RBP6.53□□□□□ -1.36
PDLIM5-213ENST00000509357 PSG1P11464 419 aa6.53□□□□□ -1.36
PDLIM5-213ENST00000509357 BMI1P35226 326 aa6.53□□□□□ -1.36
PDLIM5-213ENST00000509357 GPX4P36969 197 aaPredicted RBP6.53□□□□□ -1.36
PDLIM5-213ENST00000509357 Q6ZNX1 250 aa6.53□□□□□ -1.36
PDLIM5-213ENST00000509357 C17orf77Q96MU5 243 aa6.53□□□□□ -1.36
PDLIM5-213ENST00000509357 CIB3Q96Q77 187 aaPredicted RBP6.53□□□□□ -1.36
PDLIM5-213ENST00000509357 CITED4Q96RK1 184 aa6.53□□□□□ -1.36
PDLIM5-213ENST00000509357 FAM110AQ9BQ89 295 aa6.53□□□□□ -1.36
PDLIM5-213ENST00000509357 RHPN1-AS1Q9BWJ2 59 aa6.53□□□□□ -1.36
PDLIM5-213ENST00000509357 WFDC1Q9HC57 220 aa6.53□□□□□ -1.36
PDLIM5-213ENST00000509357 RETNQ9HD89 108 aa6.53□□□□□ -1.36
PDLIM5-213ENST00000509357 MBD2Q9UBB5 411 aa6.53□□□□□ -1.36
PDLIM5-213ENST00000509357 UBQLN2Q9UHD9 624 aa6.53□□□□□ -1.36
PDLIM5-213ENST00000509357 RFNGQ9Y644 331 aa6.53□□□□□ -1.36
PDLIM5-213ENST00000509357 U3KQE9 123 aa6.53□□□□□ -1.36
PDLIM5-213ENST00000509357 LOC102724200A0A096LPH7 203 aaPredicted RBP6.52□□□□□ -1.37
PDLIM5-213ENST00000509357 IGHV7-4-1A0A0J9YVY3 117 aa6.52□□□□□ -1.37
PDLIM5-213ENST00000509357 RPS10-NUDT3A0A1W2PQS6 291 aa6.52□□□□□ -1.37
PDLIM5-213ENST00000509357 TSPAN4O14817 238 aa6.52□□□□□ -1.37
PDLIM5-213ENST00000509357 SLC25A4P12235 298 aa6.52□□□□□ -1.37
PDLIM5-213ENST00000509357 TFPI2P48307 235 aa6.52□□□□□ -1.37
PDLIM5-213ENST00000509357 RPL11P62913 178 aaKnown RBP6.52□□□□□ -1.37
PDLIM5-213ENST00000509357 EWSR1Q01844 656 aaKnown RBP eCLIP6.52□□□□□ -1.37
PDLIM5-213ENST00000509357 CD300CQ08708 224 aa6.52□□□□□ -1.37
PDLIM5-213ENST00000509357 VWC2Q2TAL6 325 aa6.52□□□□□ -1.37
PDLIM5-213ENST00000509357 FAM90A2PQ658T7 463 aa6.52□□□□□ -1.37
PDLIM5-213ENST00000509357 ZFAND6Q6FIF0 208 aa6.52□□□□□ -1.37
PDLIM5-213ENST00000509357 ZNF600Q6ZNG1 722 aa6.52□□□□□ -1.37
PDLIM5-213ENST00000509357 OR1S2Q8NGQ3 325 aa6.52□□□□□ -1.37
PDLIM5-213ENST00000509357 ST8SIA2Q92186 375 aa6.52□□□□□ -1.37
PDLIM5-213ENST00000509357 MGST2Q99735 147 aa6.52□□□□□ -1.37
PDLIM5-213ENST00000509357 GGTLC1Q9BX51 225 aa6.52□□□□□ -1.37
PDLIM5-213ENST00000509357 MED28Q9H204 178 aa6.52□□□□□ -1.37
PDLIM5-213ENST00000509357 CACFD1Q9UGQ2 172 aa6.52□□□□□ -1.37
PDLIM5-213ENST00000509357 SMPXQ9UHP9 88 aa6.52□□□□□ -1.37
PDLIM5-213ENST00000509357 NBEAL2Q6ZNJ1 2754 aa6.52□□□□□ -1.37
PDLIM5-213ENST00000509357 DNASE2O00115 360 aaPredicted RBP6.51□□□□□ -1.37
PDLIM5-213ENST00000509357 CHEK1O14757 476 aa6.51□□□□□ -1.37
PDLIM5-213ENST00000509357 TOMM40O96008 361 aa6.51□□□□□ -1.37
PDLIM5-213ENST00000509357 CAV2P51636 162 aa6.51□□□□□ -1.37
PDLIM5-213ENST00000509357 ATP5IP56385 69 aaPredicted RBP6.51□□□□□ -1.37
PDLIM5-213ENST00000509357 YPEL3P61236 119 aaPredicted RBP6.51□□□□□ -1.37
PDLIM5-213ENST00000509357 RAB11AP62491 216 aa6.51□□□□□ -1.37
PDLIM5-213ENST00000509357 PAFAH1B2P68402 229 aa6.51□□□□□ -1.37
PDLIM5-213ENST00000509357 DLK1P80370 383 aa6.51□□□□□ -1.37
PDLIM5-213ENST00000509357 SLC38A11Q08AI6 406 aa6.51□□□□□ -1.37
PDLIM5-213ENST00000509357 OR2F1Q13607 317 aa6.51□□□□□ -1.37
PDLIM5-213ENST00000509357 CASC10Q5T4H9 136 aa6.51□□□□□ -1.37
PDLIM5-213ENST00000509357 LINC00322Q6ZN03 302 aaPredicted RBP6.51□□□□□ -1.37
PDLIM5-213ENST00000509357 TMEM144Q7Z5S9 345 aa6.51□□□□□ -1.37
PDLIM5-213ENST00000509357 NOXA1Q86UR1 476 aa6.51□□□□□ -1.37
PDLIM5-213ENST00000509357 WFDC3Q8IUB2 231 aa6.51□□□□□ -1.37
PDLIM5-213ENST00000509357 FAM24BQ8N5W8 94 aa6.51□□□□□ -1.37
PDLIM5-213ENST00000509357 TMEM217Q8N7C4 229 aa6.51□□□□□ -1.37
PDLIM5-213ENST00000509357 OR11H4Q8NGC9 324 aa6.51□□□□□ -1.37
PDLIM5-213ENST00000509357 OR51G1Q8NGK1 321 aa6.51□□□□□ -1.37
PDLIM5-213ENST00000509357 NARS2Q96I59 477 aaKnown RBP6.51□□□□□ -1.37
PDLIM5-213ENST00000509357 RNF2Q99496 336 aa6.51□□□□□ -1.37
PDLIM5-213ENST00000509357 TRGV9Q99603 122 aa6.51□□□□□ -1.37
PDLIM5-213ENST00000509357 VSIRQ9H7M9 311 aa6.51□□□□□ -1.37
PDLIM5-213ENST00000509357 DNAH7Q8WXX0 4024 aa6.51□□□□□ -1.37
PDLIM5-213ENST00000509357 RYR3Q15413 4870 aa6.5□□□□□ -1.37
PDLIM5-213ENST00000509357 TRAV30A0A087WSZ9 112 aa6.5□□□□□ -1.37
PDLIM5-213ENST00000509357 RNF222A6NCQ9 220 aa6.5□□□□□ -1.37
PDLIM5-213ENST00000509357 IL4P05112 153 aa6.5□□□□□ -1.37
PDLIM5-213ENST00000509357 GIPP09681 153 aaPredicted RBP6.5□□□□□ -1.37
PDLIM5-213ENST00000509357 LINC00869P0C866 280 aa6.5□□□□□ -1.37
PDLIM5-213ENST00000509357 NPPCP23582 126 aa6.5□□□□□ -1.37
PDLIM5-213ENST00000509357 CRYBB3P26998 211 aa6.5□□□□□ -1.37
PDLIM5-213ENST00000509357 P2RY1P47900 373 aa6.5□□□□□ -1.37
PDLIM5-213ENST00000509357 SULT1A1P50225 295 aa6.5□□□□□ -1.37
PDLIM5-213ENST00000509357 BCAP31P51572 246 aa6.5□□□□□ -1.37
PDLIM5-213ENST00000509357 APOC4P55056 127 aa6.5□□□□□ -1.37
PDLIM5-213ENST00000509357 CMC4P56277 68 aaPredicted RBP6.5□□□□□ -1.37
PDLIM5-213ENST00000509357 MORN5Q5VZ52 161 aa6.5□□□□□ -1.37
PDLIM5-213ENST00000509357 PATE2Q6UY27 113 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms