RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 H2AFB2P0C5Z0 115 aa11.92□□□□□ -0.5
PDLIM5-212ENST00000509333 FAM24BQ8N5W8 94 aa11.92□□□□□ -0.5
PDLIM5-212ENST00000509333 THAP8Q8NA92 274 aa11.92□□□□□ -0.5
PDLIM5-212ENST00000509333 OR51G1Q8NGK1 321 aa11.92□□□□□ -0.5
PDLIM5-212ENST00000509333 MAP6D1Q9H9H5 199 aa11.92□□□□□ -0.5
PDLIM5-212ENST00000509333 PAIP2BQ9ULR5 123 aaKnown RBP11.92□□□□□ -0.5
PDLIM5-212ENST00000509333 STRAPQ9Y3F4 350 aaKnown RBP11.92□□□□□ -0.5
PDLIM5-212ENST00000509333 KIR2DL5BA0A0G2JN68 375 aa11.91□□□□□ -0.5
PDLIM5-212ENST00000509333 KIR2DL5BA0A0G2JPC4 375 aa11.91□□□□□ -0.5
PDLIM5-212ENST00000509333 FAM240BA0A1B0GVZ2 78 aa11.91□□□□□ -0.5
PDLIM5-212ENST00000509333 ZFP92A6NM28 416 aa11.91□□□□□ -0.5
PDLIM5-212ENST00000509333 PMS2P5A8MQ11 134 aa11.91□□□□□ -0.5
PDLIM5-212ENST00000509333 SNRPGP15A8MWD9 76 aa11.91□□□□□ -0.5
PDLIM5-212ENST00000509333 K7EQG2 157 aa11.91□□□□□ -0.5
PDLIM5-212ENST00000509333 UBE2CO00762 179 aa11.91□□□□□ -0.5
PDLIM5-212ENST00000509333 IFITM3Q01628 133 aa11.91□□□□□ -0.5
PDLIM5-212ENST00000509333 ASAH1Q13510 395 aa11.91□□□□□ -0.5
PDLIM5-212ENST00000509333 ZNF846Q147U1 533 aa11.91□□□□□ -0.5
PDLIM5-212ENST00000509333 IAH1Q2TAA2 248 aaPredicted RBP11.91□□□□□ -0.5
PDLIM5-212ENST00000509333 KIR2DL5AQ8N109 375 aa11.91□□□□□ -0.5
PDLIM5-212ENST00000509333 KIR2DL5BQ8NHK3 375 aa11.91□□□□□ -0.5
PDLIM5-212ENST00000509333 ZNF431Q8TF32 576 aaPredicted RBP11.91□□□□□ -0.5
PDLIM5-212ENST00000509333 GLMPQ8WWB7 406 aa11.91□□□□□ -0.5
PDLIM5-212ENST00000509333 GRAMD2BQ96HH9 432 aa11.91□□□□□ -0.5
PDLIM5-212ENST00000509333 NARS2Q96I59 477 aaKnown RBP11.91□□□□□ -0.5
PDLIM5-212ENST00000509333 TRGV9Q99603 122 aa11.91□□□□□ -0.5
PDLIM5-212ENST00000509333 NUDT15Q9NV35 164 aa11.91□□□□□ -0.5
PDLIM5-212ENST00000509333 PSENENQ9NZ42 101 aa11.91□□□□□ -0.5
PDLIM5-212ENST00000509333 PTTG2Q9NZH5 202 aa11.91□□□□□ -0.5
PDLIM5-212ENST00000509333 GSKIPQ9P0R6 139 aa11.91□□□□□ -0.5
PDLIM5-212ENST00000509333 RPL35AP18077 110 aaKnown RBP11.9□□□□□ -0.5
PDLIM5-212ENST00000509333 AP2S1P53680 142 aaPredicted RBP11.9□□□□□ -0.5
PDLIM5-212ENST00000509333 CASC10Q5T4H9 136 aa11.9□□□□□ -0.5
PDLIM5-212ENST00000509333 MZT2BQ6NZ67 158 aa11.9□□□□□ -0.5
PDLIM5-212ENST00000509333 Q6ZWC4 215 aa11.9□□□□□ -0.5
PDLIM5-212ENST00000509333 STPG3Q8N7X2 389 aa11.9□□□□□ -0.5
PDLIM5-212ENST00000509333 ZBTB8BQ8NAP8 495 aaPredicted RBP11.9□□□□□ -0.5
PDLIM5-212ENST00000509333 DCANP1Q8TF63 244 aa11.9□□□□□ -0.5
PDLIM5-212ENST00000509333 RNF125Q96EQ8 232 aa11.9□□□□□ -0.5
PDLIM5-212ENST00000509333 SEC22CQ9BRL7 303 aa11.9□□□□□ -0.5
PDLIM5-212ENST00000509333 RABAC1Q9UI14 185 aa11.9□□□□□ -0.5
PDLIM5-212ENST00000509333 HELTA6NFD8 242 aa11.89□□□□□ -0.51
PDLIM5-212ENST00000509333 H3BP45 60 aa11.89□□□□□ -0.51
PDLIM5-212ENST00000509333 UPK1BO75841 260 aa11.89□□□□□ -0.51
PDLIM5-212ENST00000509333 APOC4P55056 127 aa11.89□□□□□ -0.51
PDLIM5-212ENST00000509333 DEFB131AP59861 70 aa11.89□□□□□ -0.51
PDLIM5-212ENST00000509333 OR2F1Q13607 317 aa11.89□□□□□ -0.51
PDLIM5-212ENST00000509333 TMEM182Q6ZP80 229 aaPredicted RBP11.89□□□□□ -0.51
PDLIM5-212ENST00000509333 C12orf45Q8N5I9 185 aaPredicted RBP11.89□□□□□ -0.51
PDLIM5-212ENST00000509333 RAB40CQ96S21 281 aa11.89□□□□□ -0.51
PDLIM5-212ENST00000509333 CSTL1Q9H114 145 aa11.89□□□□□ -0.51
PDLIM5-212ENST00000509333 BATF3Q9NR55 127 aa11.89□□□□□ -0.51
PDLIM5-212ENST00000509333 SPRY2O43597 315 aa11.88□□□□□ -0.51
PDLIM5-212ENST00000509333 MBPP02686 304 aaPredicted RBP11.88□□□□□ -0.51
PDLIM5-212ENST00000509333 IL5P05113 134 aa11.88□□□□□ -0.51
PDLIM5-212ENST00000509333 LYL1P12980 280 aa11.88□□□□□ -0.51
PDLIM5-212ENST00000509333 EIF2B2P49770 351 aaKnown RBP11.88□□□□□ -0.51
PDLIM5-212ENST00000509333 TAS2R30P59541 319 aa11.88□□□□□ -0.51
PDLIM5-212ENST00000509333 TMEM14EPQ6UXP3 125 aa11.88□□□□□ -0.51
PDLIM5-212ENST00000509333 STXBP6Q8NFX7 210 aa11.88□□□□□ -0.51
PDLIM5-212ENST00000509333 WDR12Q9GZL7 423 aaKnown RBP11.88□□□□□ -0.51
PDLIM5-212ENST00000509333 TP53TG1Q9Y2A0 90 aa11.88□□□□□ -0.51
PDLIM5-212ENST00000509333 AGRNO00468 2067 aa11.87□□□□□ -0.51
PDLIM5-212ENST00000509333 SSSCA1O60232 199 aa11.87□□□□□ -0.51
PDLIM5-212ENST00000509333 FABP1P07148 127 aa11.87□□□□□ -0.51
PDLIM5-212ENST00000509333 IL15RAQ13261 267 aa11.87□□□□□ -0.51
PDLIM5-212ENST00000509333 LEMD1Q68G75 181 aa11.87□□□□□ -0.51
PDLIM5-212ENST00000509333 OR8G2PQ6IF36 304 aa11.87□□□□□ -0.51
PDLIM5-212ENST00000509333 TMEM144Q7Z5S9 345 aa11.87□□□□□ -0.51
PDLIM5-212ENST00000509333 RNF183Q96D59 192 aa11.87□□□□□ -0.51
PDLIM5-212ENST00000509333 C7orf66A4D0T2 115 aa11.86□□□□□ -0.51
PDLIM5-212ENST00000509333 CCSO14618 274 aa11.86□□□□□ -0.51
PDLIM5-212ENST00000509333 CCNKO75909 580 aa11.86□□□□□ -0.51
PDLIM5-212ENST00000509333 C2orf50Q96LR7 162 aa11.86□□□□□ -0.51
PDLIM5-212ENST00000509333 PBDC1Q9BVG4 233 aa11.86□□□□□ -0.51
PDLIM5-212ENST00000509333 RCL1Q9Y2P8 373 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-212ENST00000509333 TSC22D2O75157 780 aa11.85□□□□□ -0.51
PDLIM5-212ENST00000509333 SCGB1D2O95969 90 aa11.85□□□□□ -0.51
PDLIM5-212ENST00000509333 CFDP00746 253 aaPredicted RBP11.85□□□□□ -0.51
PDLIM5-212ENST00000509333 METTL15P1P0C7V9 234 aa11.85□□□□□ -0.51
PDLIM5-212ENST00000509333 GATA2P23769 480 aaPredicted RBP11.85□□□□□ -0.51
PDLIM5-212ENST00000509333 ARL16Q0P5N6 197 aa11.85□□□□□ -0.51
PDLIM5-212ENST00000509333 C1orf194Q5T5A4 169 aa11.85□□□□□ -0.51
PDLIM5-212ENST00000509333 ACOT7LQ6ZUV0 252 aa11.85□□□□□ -0.51
PDLIM5-212ENST00000509333 C11orf1Q9H5F2 150 aa11.85□□□□□ -0.51
PDLIM5-212ENST00000509333 SEPSECSQ9HD40 501 aaKnown RBP11.85□□□□□ -0.51
PDLIM5-212ENST00000509333 PFDN2Q9UHV9 154 aa11.85□□□□□ -0.51
PDLIM5-212ENST00000509333 CSMD3Q7Z407 3707 aa11.85□□□□□ -0.51
PDLIM5-212ENST00000509333 STARD9Q9P2P6 4700 aa11.84□□□□□ -0.51
PDLIM5-212ENST00000509333 C5orf51A6NDU8 294 aa11.84□□□□□ -0.51
PDLIM5-212ENST00000509333 FAM25EA8MYX2 175 aa11.84□□□□□ -0.51
PDLIM5-212ENST00000509333 ZNF688P0C7X2 276 aa11.84□□□□□ -0.51
PDLIM5-212ENST00000509333 LYZP61626 148 aa11.84□□□□□ -0.51
PDLIM5-212ENST00000509333 DEFB135Q30KP9 77 aa11.84□□□□□ -0.51
PDLIM5-212ENST00000509333 ZFAND6Q6FIF0 208 aa11.84□□□□□ -0.51
PDLIM5-212ENST00000509333 SIGLEC15Q6ZMC9 328 aa11.84□□□□□ -0.51
PDLIM5-212ENST00000509333 NPVFQ9HCQ7 196 aa11.84□□□□□ -0.51
PDLIM5-212ENST00000509333 NRN1Q9NPD7 142 aa11.84□□□□□ -0.51
PDLIM5-212ENST00000509333 RYR3Q15413 4870 aa11.83□□□□□ -0.51
PDLIM5-212ENST00000509333 FNDC10F2Z333 226 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms