RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 TMEM11P17152 192 aa13.94□□□□□ -0.18
SFXN1-208ENST00000507823 CDX1P47902 265 aaPredicted RBP13.94□□□□□ -0.18
SFXN1-208ENST00000507823 Q8N9W7 124 aa13.94□□□□□ -0.18
SFXN1-208ENST00000507823 GSX1Q9H4S2 264 aaPredicted RBP13.94□□□□□ -0.18
SFXN1-208ENST00000507823 TMEM14CQ9P0S9 112 aa13.94□□□□□ -0.18
SFXN1-208ENST00000507823 ACACBO00763 2458 aa13.93□□□□□ -0.18
SFXN1-208ENST00000507823 HLA-DRB1P01911 266 aa13.93□□□□□ -0.18
SFXN1-208ENST00000507823 FABP1P07148 127 aa13.93□□□□□ -0.18
SFXN1-208ENST00000507823 FAM106CPP0CH98 169 aa13.93□□□□□ -0.18
SFXN1-208ENST00000507823 MEOX2P50222 304 aa13.93□□□□□ -0.18
SFXN1-208ENST00000507823 RASL11BQ9BPW5 248 aa13.93□□□□□ -0.18
SFXN1-208ENST00000507823 C1RLQ9NZP8 487 aa13.93□□□□□ -0.18
SFXN1-208ENST00000507823 WNK2Q9Y3S1 2297 aa13.93□□□□□ -0.18
SFXN1-208ENST00000507823 EGR2P11161 476 aaPredicted RBP13.93□□□□□ -0.18
SFXN1-208ENST00000507823 TIGITQ495A1 244 aa13.93□□□□□ -0.18
SFXN1-208ENST00000507823 ACTL10Q5JWF8 245 aa13.93□□□□□ -0.18
SFXN1-208ENST00000507823 C10orf105Q8TEF2 133 aa13.93□□□□□ -0.18
SFXN1-208ENST00000507823 CCL19Q99731 98 aa13.93□□□□□ -0.18
SFXN1-208ENST00000507823 FAM103A1Q9BTL3 118 aaKnown RBP13.93□□□□□ -0.18
SFXN1-208ENST00000507823 HIGD1AQ9Y241 93 aa13.93□□□□□ -0.18
SFXN1-208ENST00000507823 SAA4P35542 130 aa13.92□□□□□ -0.18
SFXN1-208ENST00000507823 SGMS2Q8NHU3 365 aa13.92□□□□□ -0.18
SFXN1-208ENST00000507823 TMEM190Q8WZ59 177 aa13.92□□□□□ -0.18
SFXN1-208ENST00000507823 IL36BQ9NZH7 164 aa13.92□□□□□ -0.18
SFXN1-208ENST00000507823 IGHV7-81A0A0B4J1V7 117 aa13.92□□□□□ -0.18
SFXN1-208ENST00000507823 TOMM40O96008 361 aa13.92□□□□□ -0.18
SFXN1-208ENST00000507823 NDUFA6P56556 154 aa13.92□□□□□ -0.18
SFXN1-208ENST00000507823 RBM14Q96PK6 669 aaKnown RBP13.92□□□□□ -0.18
SFXN1-208ENST00000507823 PIMREGQ9BSJ6 248 aa13.92□□□□□ -0.18
SFXN1-208ENST00000507823 OSTCQ9NRP0 149 aa13.92□□□□□ -0.18
SFXN1-208ENST00000507823 V9GYV3 84 aa13.92□□□□□ -0.18
SFXN1-208ENST00000507823 SMIM6P0DI80 62 aa13.91□□□□□ -0.18
SFXN1-208ENST00000507823 BRS3P32247 399 aa13.91□□□□□ -0.18
SFXN1-208ENST00000507823 RPL15P61313 204 aaKnown RBP13.91□□□□□ -0.18
SFXN1-208ENST00000507823 ABCA1O95477 2261 aa13.91□□□□□ -0.18
SFXN1-208ENST00000507823 TRAV30A0A087WSZ9 112 aa13.91□□□□□ -0.18
SFXN1-208ENST00000507823 IFITM10A6NMD0 228 aa13.91□□□□□ -0.18
SFXN1-208ENST00000507823 NCBP2LA6PVI3 153 aaKnown RBP13.91□□□□□ -0.18
SFXN1-208ENST00000507823 PEX7O00628 323 aa13.91□□□□□ -0.18
SFXN1-208ENST00000507823 ISLRO14498 428 aa13.91□□□□□ -0.18
SFXN1-208ENST00000507823 NPFFO15130 113 aa13.91□□□□□ -0.18
SFXN1-208ENST00000507823 RNF224P0DH78 156 aa13.91□□□□□ -0.18
SFXN1-208ENST00000507823 YPEL3P61236 119 aaPredicted RBP13.91□□□□□ -0.18
SFXN1-208ENST00000507823 NBEAP1P0C6P0 100 aa13.9□□□□□ -0.18
SFXN1-208ENST00000507823 RD3LP0DJH9 198 aa13.9□□□□□ -0.18
SFXN1-208ENST00000507823 COA6Q5JTJ3 125 aaKnown RBP13.9□□□□□ -0.18
SFXN1-208ENST00000507823 FAM168AQ92567 244 aa13.9□□□□□ -0.18
SFXN1-208ENST00000507823 C12orf57Q99622 126 aa13.9□□□□□ -0.18
SFXN1-208ENST00000507823 SLC25A39Q9BZJ4 359 aaPredicted RBP13.9□□□□□ -0.18
SFXN1-208ENST00000507823 KLF12Q9Y4X4 402 aa13.9□□□□□ -0.18
SFXN1-208ENST00000507823 MED13LQ71F56 2210 aa13.9□□□□□ -0.18
SFXN1-208ENST00000507823 CENPVL3A0A0U1RRI6 287 aa13.9□□□□□ -0.18
SFXN1-208ENST00000507823 HNF1AP20823 631 aa13.9□□□□□ -0.18
SFXN1-208ENST00000507823 FAM120AOSQ5T036 256 aa13.9□□□□□ -0.18
SFXN1-208ENST00000507823 PIP4P2Q8N4L2 257 aa13.9□□□□□ -0.18
SFXN1-208ENST00000507823 ABCA2Q9BZC7 2435 aa13.89□□□□□ -0.19
SFXN1-208ENST00000507823 WI2-2373I1.2A0A1W2PRP0 233 aa13.89□□□□□ -0.19
SFXN1-208ENST00000507823 F8W735 103 aaPredicted RBP13.89□□□□□ -0.19
SFXN1-208ENST00000507823 FCGR2BP31994 310 aaPredicted RBP13.89□□□□□ -0.19
SFXN1-208ENST00000507823 CNN1P51911 297 aaKnown RBP13.89□□□□□ -0.19
SFXN1-208ENST00000507823 IGHV4-61A0A0C4DH41 118 aa13.89□□□□□ -0.19
SFXN1-208ENST00000507823 LYZP61626 148 aa13.89□□□□□ -0.19
SFXN1-208ENST00000507823 CLEC12BQ2HXU8 276 aa13.89□□□□□ -0.19
SFXN1-208ENST00000507823 SHANK2-AS3Q9BTD1 123 aa13.89□□□□□ -0.19
SFXN1-208ENST00000507823 EPDR1Q9UM22 224 aa13.89□□□□□ -0.19
SFXN1-208ENST00000507823 AKAP6Q13023 2319 aa13.89□□□□□ -0.19
SFXN1-208ENST00000507823 MFAP4P55083 255 aa13.88□□□□□ -0.19
SFXN1-208ENST00000507823 TMEM183BQ1AE95 376 aa13.88□□□□□ -0.19
SFXN1-208ENST00000507823 ZNF491Q8N8L2 437 aa13.88□□□□□ -0.19
SFXN1-208ENST00000507823 SMIM12Q96EX1 92 aa13.88□□□□□ -0.19
SFXN1-208ENST00000507823 PITPNC1Q9UKF7 332 aa13.88□□□□□ -0.19
SFXN1-208ENST00000507823 H3BRN7 92 aa13.88□□□□□ -0.19
SFXN1-208ENST00000507823 PAX1P15863 534 aa13.88□□□□□ -0.19
SFXN1-208ENST00000507823 OR5I1Q13606 314 aa13.88□□□□□ -0.19
SFXN1-208ENST00000507823 KLF17Q5JT82 389 aaPredicted RBP13.88□□□□□ -0.19
SFXN1-208ENST00000507823 HIST3H2BBQ8N257 126 aa13.88□□□□□ -0.19
SFXN1-208ENST00000507823 ZNF600Q6ZNG1 722 aa13.87□□□□□ -0.19
SFXN1-208ENST00000507823 A0A0U1RQK1 487 aa13.87□□□□□ -0.19
SFXN1-208ENST00000507823 ZNF320A2RRD8 509 aa13.87□□□□□ -0.19
SFXN1-208ENST00000507823 HIST1H1EP10412 219 aaKnown RBP13.87□□□□□ -0.19
SFXN1-208ENST00000507823 ERVFC1-1P60608 527 aa13.87□□□□□ -0.19
SFXN1-208ENST00000507823 FAM231DQ6ZW35 169 aa13.87□□□□□ -0.19
SFXN1-208ENST00000507823 TMEM68Q96MH6 324 aa13.87□□□□□ -0.19
SFXN1-208ENST00000507823 THYN1Q9P016 225 aa13.87□□□□□ -0.19
SFXN1-208ENST00000507823 S100A9P06702 114 aaKnown RBP13.86□□□□□ -0.19
SFXN1-208ENST00000507823 RANP62826 216 aaKnown RBP13.86□□□□□ -0.19
SFXN1-208ENST00000507823 C5orf17Q8NAS9 161 aa13.86□□□□□ -0.19
SFXN1-208ENST00000507823 FAM110DQ8TAY7 271 aaPredicted RBP13.86□□□□□ -0.19
SFXN1-208ENST00000507823 TXN2Q99757 166 aa13.86□□□□□ -0.19
SFXN1-208ENST00000507823 USP24Q9UPU5 2620 aa13.86□□□□□ -0.19
SFXN1-208ENST00000507823 SLC17A3O00476 420 aa13.86□□□□□ -0.19
SFXN1-208ENST00000507823 RNF125Q96EQ8 232 aa13.86□□□□□ -0.19
SFXN1-208ENST00000507823 HIST1H1BP16401 226 aaKnown RBP13.85□□□□□ -0.19
SFXN1-208ENST00000507823 CLEC2AQ6UVW9 174 aa13.85□□□□□ -0.19
SFXN1-208ENST00000507823 LINC00479Q96M42 142 aa13.85□□□□□ -0.19
SFXN1-208ENST00000507823 HSPB9Q9BQS6 159 aa13.85□□□□□ -0.19
SFXN1-208ENST00000507823 C7orf69Q9H7B7 122 aa13.85□□□□□ -0.19
SFXN1-208ENST00000507823 C21orf62Q9NYP8 219 aa13.85□□□□□ -0.19
SFXN1-208ENST00000507823 USP9XQ93008 2570 aaPredicted RBP13.85□□□□□ -0.19
SFXN1-208ENST00000507823 IGHV1-69DA0A0B4J2H0 117 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms