RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 SPRNQ5BIV9 151 aa14.29□□□□□ -0.12
NUP54-205ENST00000507257 ZNF788Q6ZQV5 615 aa14.29□□□□□ -0.12
NUP54-205ENST00000507257 ITLN1Q8WWA0 313 aa14.29□□□□□ -0.12
NUP54-205ENST00000507257 GAGE12BA1L429 117 aa14.28□□□□□ -0.12
NUP54-205ENST00000507257 CHEK1O14757 476 aa14.28□□□□□ -0.12
NUP54-205ENST00000507257 CRYGCP07315 174 aa14.28□□□□□ -0.12
NUP54-205ENST00000507257 IGLC1P0CG04 106 aa14.28□□□□□ -0.12
NUP54-205ENST00000507257 GLRXP35754 106 aa14.28□□□□□ -0.12
NUP54-205ENST00000507257 WT1-ASQ06250 92 aa14.28□□□□□ -0.12
NUP54-205ENST00000507257 C3orf36Q3SXR2 165 aa14.28□□□□□ -0.12
NUP54-205ENST00000507257 ETFRF1Q6IPR1 90 aa14.28□□□□□ -0.12
NUP54-205ENST00000507257 C9orf106Q8NAJ2 232 aa14.28□□□□□ -0.12
NUP54-205ENST00000507257 PGLYRP4Q96LB8 373 aa14.28□□□□□ -0.12
NUP54-205ENST00000507257 TRGV9Q99603 122 aa14.28□□□□□ -0.12
NUP54-205ENST00000507257 CSTL1Q9H114 145 aa14.28□□□□□ -0.12
NUP54-205ENST00000507257 TP73-AS1Q9UF72 201 aa14.28□□□□□ -0.12
NUP54-205ENST00000507257 IGLV3-9A0A075B6K5 115 aa14.27□□□□□ -0.12
NUP54-205ENST00000507257 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.27□□□□□ -0.12
NUP54-205ENST00000507257 CGB1A6NKQ9 187 aa14.27□□□□□ -0.12
NUP54-205ENST00000507257 TCRAP04437 139 aa14.27□□□□□ -0.12
NUP54-205ENST00000507257 C2orf91Q6ZV80 131 aa14.27□□□□□ -0.12
NUP54-205ENST00000507257 BHLHA15Q7RTS1 189 aaPredicted RBP14.27□□□□□ -0.12
NUP54-205ENST00000507257 OR10X1Q8NGY0 326 aa14.27□□□□□ -0.12
NUP54-205ENST00000507257 DAZAP1Q96EP5 407 aaKnown RBP14.27□□□□□ -0.12
NUP54-205ENST00000507257 LINC00312Q9Y6C7 94 aa14.27□□□□□ -0.12
NUP54-205ENST00000507257 hADV38S2A0JD32 116 aa14.27□□□□□ -0.13
NUP54-205ENST00000507257 PLP1P60201 277 aa14.27□□□□□ -0.13
NUP54-205ENST00000507257 NEU4Q8WWR8 484 aaPredicted RBP14.27□□□□□ -0.13
NUP54-205ENST00000507257 FLYWCH2Q96CP2 140 aaKnown RBP14.27□□□□□ -0.13
NUP54-205ENST00000507257 HEATR1Q9H583 2144 aaKnown RBP14.27□□□□□ -0.13
NUP54-205ENST00000507257 SSUH2Q9Y2M2 353 aa14.27□□□□□ -0.13
NUP54-205ENST00000507257 A0A1B0GW15 77 aa14.26□□□□□ -0.13
NUP54-205ENST00000507257 CBY3A6NI87 242 aa14.26□□□□□ -0.13
NUP54-205ENST00000507257 GP9P14770 177 aa14.26□□□□□ -0.13
NUP54-205ENST00000507257 PAX2Q02962 417 aa14.26□□□□□ -0.13
NUP54-205ENST00000507257 MRPL20Q9BYC9 149 aaKnown RBP14.26□□□□□ -0.13
NUP54-205ENST00000507257 TRAV8-6A0A0B4J262 113 aa14.25□□□□□ -0.13
NUP54-205ENST00000507257 C22orf46C9J442 243 aa14.25□□□□□ -0.13
NUP54-205ENST00000507257 E7EUB6 86 aa14.25□□□□□ -0.13
NUP54-205ENST00000507257 OR4C13Q8NGP0 309 aa14.25□□□□□ -0.13
NUP54-205ENST00000507257 PRR14LQ5THK1 2151 aa14.25□□□□□ -0.13
NUP54-205ENST00000507257 OVOL3O00110 214 aa14.25□□□□□ -0.13
NUP54-205ENST00000507257 LAMTOR5O43504 91 aa14.25□□□□□ -0.13
NUP54-205ENST00000507257 HOXB4P17483 251 aaPredicted RBP14.25□□□□□ -0.13
NUP54-205ENST00000507257 UFSP1Q6NVU6 142 aa14.25□□□□□ -0.13
NUP54-205ENST00000507257 DUX4L9Q6RFH8 374 aaPredicted RBP14.25□□□□□ -0.13
NUP54-205ENST00000507257 BPIFA4PQ86YQ2 179 aa14.25□□□□□ -0.13
NUP54-205ENST00000507257 ZNF747Q9BV97 191 aa14.25□□□□□ -0.13
NUP54-205ENST00000507257 RNF24Q9Y225 148 aa14.25□□□□□ -0.13
NUP54-205ENST00000507257 A0A087X0K7 114 aa14.24□□□□□ -0.13
NUP54-205ENST00000507257 MEF2CQ06413 473 aaPredicted RBP14.24□□□□□ -0.13
NUP54-205ENST00000507257 TEX36Q5VZQ5 186 aa14.24□□□□□ -0.13
NUP54-205ENST00000507257 C8orf31Q8N9H6 132 aa14.24□□□□□ -0.13
NUP54-205ENST00000507257 MRPL36Q9P0J6 103 aaKnown RBP14.24□□□□□ -0.13
NUP54-205ENST00000507257 PROCRQ9UNN8 238 aa14.24□□□□□ -0.13
NUP54-205ENST00000507257 RAI1Q7Z5J4 1906 aaPredicted RBP14.24□□□□□ -0.13
NUP54-205ENST00000507257 C7orf71A4D174 169 aa14.23□□□□□ -0.13
NUP54-205ENST00000507257 FAM87AP0C7U9 286 aa14.23□□□□□ -0.13
NUP54-205ENST00000507257 CSN1S1P47710 185 aa14.23□□□□□ -0.13
NUP54-205ENST00000507257 ARF6P62330 175 aa14.23□□□□□ -0.13
NUP54-205ENST00000507257 TMEM97Q5BJF2 176 aa14.23□□□□□ -0.13
NUP54-205ENST00000507257 FAM201AQ5SY85 155 aa14.23□□□□□ -0.13
NUP54-205ENST00000507257 ERASQ7Z444 233 aa14.23□□□□□ -0.13
NUP54-205ENST00000507257 Q86TA4 180 aa14.23□□□□□ -0.13
NUP54-205ENST00000507257 OR1N2Q8NGR9 330 aa14.23□□□□□ -0.13
NUP54-205ENST00000507257 BLNKQ8WV28 456 aa14.23□□□□□ -0.13
NUP54-205ENST00000507257 SARAFQ96BY9 339 aa14.23□□□□□ -0.13
NUP54-205ENST00000507257 TMUB1Q9BVT8 246 aa14.23□□□□□ -0.13
NUP54-205ENST00000507257 Q9H3A6 140 aa14.23□□□□□ -0.13
NUP54-205ENST00000507257 OTORQ9NRC9 128 aa14.23□□□□□ -0.13
NUP54-205ENST00000507257 AP5S1Q9NUS5 200 aa14.23□□□□□ -0.13
NUP54-205ENST00000507257 FREM2Q5SZK8 3169 aa14.23□□□□□ -0.13
NUP54-205ENST00000507257 SPRY3O43610 288 aa14.23□□□□□ -0.13
NUP54-205ENST00000507257 GTF2H5Q6ZYL4 71 aa14.23□□□□□ -0.13
NUP54-205ENST00000507257 TMEM116Q8NCL8 245 aa14.23□□□□□ -0.13
NUP54-205ENST00000507257 RND1Q92730 232 aa14.23□□□□□ -0.13
NUP54-205ENST00000507257 FRYLO94915 3013 aa14.23□□□□□ -0.13
NUP54-205ENST00000507257 H3BRM9 83 aa14.22□□□□□ -0.13
NUP54-205ENST00000507257 IGLV2-23P01705 113 aa14.22□□□□□ -0.13
NUP54-205ENST00000507257 CD24P25063 80 aa14.22□□□□□ -0.13
NUP54-205ENST00000507257 COL8A1P27658 744 aa14.22□□□□□ -0.13
NUP54-205ENST00000507257 CEACAM3P40198 252 aa14.22□□□□□ -0.13
NUP54-205ENST00000507257 RIGQ13278 110 aa14.22□□□□□ -0.13
NUP54-205ENST00000507257 OR10AG1Q8NH19 301 aa14.22□□□□□ -0.13
NUP54-205ENST00000507257 TMEM14CQ9P0S9 112 aa14.22□□□□□ -0.13
NUP54-205ENST00000507257 A0A1B0GUT8 65 aa14.21□□□□□ -0.13
NUP54-205ENST00000507257 PLAUP00749 431 aa14.21□□□□□ -0.13
NUP54-205ENST00000507257 FGF6P10767 208 aa14.21□□□□□ -0.13
NUP54-205ENST00000507257 ORM2P19652 201 aa14.21□□□□□ -0.13
NUP54-205ENST00000507257 HTR1DP28221 377 aa14.21□□□□□ -0.13
NUP54-205ENST00000507257 ZNF137PP52743 207 aa14.21□□□□□ -0.13
NUP54-205ENST00000507257 LINC00311Q8N616 119 aa14.21□□□□□ -0.13
NUP54-205ENST00000507257 OR1B1Q8NGR6 318 aa14.21□□□□□ -0.13
NUP54-205ENST00000507257 C8orf46Q8TAG6 207 aa14.21□□□□□ -0.13
NUP54-205ENST00000507257 CCL13Q99616 98 aa14.21□□□□□ -0.13
NUP54-205ENST00000507257 C9orf118A6NHY6 69 aa14.21□□□□□ -0.14
NUP54-205ENST00000507257 SIVA1O15304 175 aa14.21□□□□□ -0.14
NUP54-205ENST00000507257 TIMM23BQ5SRD1 257 aa14.21□□□□□ -0.14
NUP54-205ENST00000507257 SGK494Q96LW2 274 aa14.21□□□□□ -0.14
NUP54-205ENST00000507257 GAGE10A6NGK3 116 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms