RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 STPG4Q8N801 248 aa14.2□□□□□ -0.14
HMGXB3-201ENST00000502717 MBNL3Q9NUK0 354 aaKnown RBP14.2□□□□□ -0.14
HMGXB3-201ENST00000502717 DOCK9Q9BZ29 2069 aa14.19□□□□□ -0.14
HMGXB3-201ENST00000502717 FOXG1P55316 489 aaPredicted RBP14.19□□□□□ -0.14
HMGXB3-201ENST00000502717 GUSBP1Q15486 140 aa14.19□□□□□ -0.14
HMGXB3-201ENST00000502717 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.19□□□□□ -0.14
HMGXB3-201ENST00000502717 HS3ST6Q96QI5 342 aa14.19□□□□□ -0.14
HMGXB3-201ENST00000502717 NDUFS8O00217 210 aa14.19□□□□□ -0.14
HMGXB3-201ENST00000502717 MLNRO43193 412 aa14.19□□□□□ -0.14
HMGXB3-201ENST00000502717 WFDC3Q8IUB2 231 aa14.19□□□□□ -0.14
HMGXB3-201ENST00000502717 IGHV2OR16-5A0A0B4J2B6 119 aa14.19□□□□□ -0.14
HMGXB3-201ENST00000502717 KLK15Q9H2R5 256 aa14.19□□□□□ -0.14
HMGXB3-201ENST00000502717 LINC00312Q9Y6C7 94 aa14.19□□□□□ -0.14
HMGXB3-201ENST00000502717 PPBPP02775 128 aa14.19□□□□□ -0.14
HMGXB3-201ENST00000502717 H7C2G1 150 aa14.18□□□□□ -0.14
HMGXB3-201ENST00000502717 SNCGO76070 127 aa14.18□□□□□ -0.14
HMGXB3-201ENST00000502717 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.18□□□□□ -0.14
HMGXB3-201ENST00000502717 TFF1P04155 84 aa14.18□□□□□ -0.14
HMGXB3-201ENST00000502717 LEPP41159 167 aa14.18□□□□□ -0.14
HMGXB3-201ENST00000502717 COLCA1Q6ZS62 124 aa14.18□□□□□ -0.14
HMGXB3-201ENST00000502717 JMJD8Q96S16 334 aa14.18□□□□□ -0.14
HMGXB3-201ENST00000502717 TRAV3A0A0B4J244 114 aa14.18□□□□□ -0.14
HMGXB3-201ENST00000502717 FAM216BQ8N7L0 139 aa14.18□□□□□ -0.14
HMGXB3-201ENST00000502717 PAX2Q02962 417 aa14.17□□□□□ -0.14
HMGXB3-201ENST00000502717 RSPO1Q2MKA7 263 aaPredicted RBP14.17□□□□□ -0.14
HMGXB3-201ENST00000502717 ZNF114Q8NC26 417 aa14.17□□□□□ -0.14
HMGXB3-201ENST00000502717 DPM2O94777 84 aa14.17□□□□□ -0.14
HMGXB3-201ENST00000502717 LGALS3P17931 250 aaKnown RBP14.17□□□□□ -0.14
HMGXB3-201ENST00000502717 ZNF479Q96JC4 524 aa14.17□□□□□ -0.14
HMGXB3-201ENST00000502717 SCRT1Q9BWW7 348 aa14.17□□□□□ -0.14
HMGXB3-201ENST00000502717 NXT2Q9NPJ8 142 aaKnown RBP14.17□□□□□ -0.14
HMGXB3-201ENST00000502717 V9GYV3 84 aa14.17□□□□□ -0.14
HMGXB3-201ENST00000502717 IGHV2-26A0A0B4J1V2 119 aa14.17□□□□□ -0.14
HMGXB3-201ENST00000502717 NTN3O00634 580 aaPredicted RBP14.17□□□□□ -0.14
HMGXB3-201ENST00000502717 CENPVQ7Z7K6 275 aaPredicted RBP14.17□□□□□ -0.14
HMGXB3-201ENST00000502717 LINC01559Q495D7 138 aa14.17□□□□□ -0.14
HMGXB3-201ENST00000502717 FAM201AQ5SY85 155 aa14.17□□□□□ -0.14
HMGXB3-201ENST00000502717 RPRMLQ8N4K4 120 aa14.17□□□□□ -0.14
HMGXB3-201ENST00000502717 COQ2Q96H96 371 aa14.17□□□□□ -0.14
HMGXB3-201ENST00000502717 PSG8Q9UQ74 426 aa14.17□□□□□ -0.14
HMGXB3-201ENST00000502717 ALPK3Q96L96 1907 aa14.17□□□□□ -0.14
HMGXB3-201ENST00000502717 DGAT2L7PQ6IED9 249 aa14.16□□□□□ -0.14
HMGXB3-201ENST00000502717 NCOR1P1Q9H4R4 102 aa14.16□□□□□ -0.14
HMGXB3-201ENST00000502717 NUP37Q8NFH4 326 aa14.16□□□□□ -0.14
HMGXB3-201ENST00000502717 PHLDA3Q9Y5J5 127 aa14.16□□□□□ -0.14
HMGXB3-201ENST00000502717 SSC4DQ8WTU2 575 aa14.16□□□□□ -0.14
HMGXB3-201ENST00000502717 CYYR1Q96J86 154 aa14.16□□□□□ -0.14
HMGXB3-201ENST00000502717 KIAA2026Q5HYC2 2103 aa14.16□□□□□ -0.14
HMGXB3-201ENST00000502717 LY6DQ14210 128 aa14.16□□□□□ -0.14
HMGXB3-201ENST00000502717 TMEM249Q2WGJ8 235 aa14.16□□□□□ -0.14
HMGXB3-201ENST00000502717 OR10J6PQ8NGY7 276 aa14.16□□□□□ -0.14
HMGXB3-201ENST00000502717 NAA38Q9BRA0 125 aaKnown RBP14.16□□□□□ -0.14
HMGXB3-201ENST00000502717 B9A039 149 aa14.15□□□□□ -0.14
HMGXB3-201ENST00000502717 C16orf92Q96LL3 132 aa14.15□□□□□ -0.14
HMGXB3-201ENST00000502717 METTL26Q96S19 204 aa14.15□□□□□ -0.14
HMGXB3-201ENST00000502717 SMPXQ9UHP9 88 aa14.15□□□□□ -0.14
HMGXB3-201ENST00000502717 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.15□□□□□ -0.14
HMGXB3-201ENST00000502717 KIR3DS1Q14943 382 aa14.15□□□□□ -0.14
HMGXB3-201ENST00000502717 ECSCRQ19T08 205 aa14.15□□□□□ -0.14
HMGXB3-201ENST00000502717 CDKN1BP46527 198 aa14.15□□□□□ -0.14
HMGXB3-201ENST00000502717 IGLL1P15814 213 aa14.15□□□□□ -0.14
HMGXB3-201ENST00000502717 GAGE13Q4V321 117 aa14.15□□□□□ -0.14
HMGXB3-201ENST00000502717 C8orf46Q8TAG6 207 aa14.15□□□□□ -0.14
HMGXB3-201ENST00000502717 OR10W1Q8NGF6 305 aa14.14□□□□□ -0.15
HMGXB3-201ENST00000502717 DLX6P56179 175 aa14.14□□□□□ -0.15
HMGXB3-201ENST00000502717 C11orf52Q96A22 123 aa14.14□□□□□ -0.15
HMGXB3-201ENST00000502717 IGKCP01834 107 aa14.14□□□□□ -0.15
HMGXB3-201ENST00000502717 TCRAP04437 139 aa14.14□□□□□ -0.15
HMGXB3-201ENST00000502717 BCL6BQ8N143 479 aaPredicted RBP14.14□□□□□ -0.15
HMGXB3-201ENST00000502717 FAM57AQ8TBR7 257 aa14.14□□□□□ -0.15
HMGXB3-201ENST00000502717 SCGB3A1Q96QR1 104 aa14.14□□□□□ -0.15
HMGXB3-201ENST00000502717 SLC25A2Q9BXI2 301 aa14.14□□□□□ -0.15
HMGXB3-201ENST00000502717 MUC6Q6W4X9 2439 aa14.14□□□□□ -0.15
HMGXB3-201ENST00000502717 PINLYPA6NC86 204 aa14.14□□□□□ -0.15
HMGXB3-201ENST00000502717 CGB1A6NKQ9 187 aa14.14□□□□□ -0.15
HMGXB3-201ENST00000502717 B3GALT5-AS1P59052 145 aa14.14□□□□□ -0.15
HMGXB3-201ENST00000502717 BDP1A6H8Y1 2624 aa14.14□□□□□ -0.15
HMGXB3-201ENST00000502717 SRRM5B3KS81 715 aa14.13□□□□□ -0.15
HMGXB3-201ENST00000502717 YAE1D1Q9NRH1 226 aa14.13□□□□□ -0.15
HMGXB3-201ENST00000502717 C9orf172C9J069 976 aa14.13□□□□□ -0.15
HMGXB3-201ENST00000502717 CD59P13987 128 aa14.13□□□□□ -0.15
HMGXB3-201ENST00000502717 NOTCH4Q99466 2003 aa14.13□□□□□ -0.15
HMGXB3-201ENST00000502717 SS18L1O75177 396 aaPredicted RBP14.12□□□□□ -0.15
HMGXB3-201ENST00000502717 PPP1R17O96001 155 aa14.12□□□□□ -0.15
HMGXB3-201ENST00000502717 LINC01560Q8TB33 94 aa14.12□□□□□ -0.15
HMGXB3-201ENST00000502717 GFRA4Q9GZZ7 299 aa14.12□□□□□ -0.15
HMGXB3-201ENST00000502717 SNRNP200O75643 2136 aaKnown RBP14.12□□□□□ -0.15
HMGXB3-201ENST00000502717 APOMO95445 188 aa14.12□□□□□ -0.15
HMGXB3-201ENST00000502717 LINC00205P59089 165 aa14.12□□□□□ -0.15
HMGXB3-201ENST00000502717 FBXL15Q9H469 300 aa14.12□□□□□ -0.15
HMGXB3-201ENST00000502717 MSRB2Q9Y3D2 182 aa14.12□□□□□ -0.15
HMGXB3-201ENST00000502717 THADAQ6YHU6 1953 aa14.12□□□□□ -0.15
HMGXB3-201ENST00000502717 SMIM27A0A1W2PRY6 76 aa14.11□□□□□ -0.15
HMGXB3-201ENST00000502717 FABP5P3A8MUU1 101 aa14.11□□□□□ -0.15
HMGXB3-201ENST00000502717 NDUFA3O95167 84 aa14.11□□□□□ -0.15
HMGXB3-201ENST00000502717 FAM106CPP0CH98 169 aa14.11□□□□□ -0.15
HMGXB3-201ENST00000502717 PVRIGQ6DKI7 326 aa14.11□□□□□ -0.15
HMGXB3-201ENST00000502717 PPIAL4CA0A0B4J2A2 164 aa14.11□□□□□ -0.15
HMGXB3-201ENST00000502717 PPIAL4GP0DN37 164 aa14.11□□□□□ -0.15
HMGXB3-201ENST00000502717 FAM53AQ6NSI3 398 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms