RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 RABAC1Q9UI14 185 aa11.91□□□□□ -0.5
LIME1-209ENST00000494776 RCL1Q9Y2P8 373 aaKnown RBP11.91□□□□□ -0.5
LIME1-209ENST00000494776 LSM5Q9Y4Y9 91 aaKnown RBP11.91□□□□□ -0.5
LIME1-209ENST00000494776 PRAF2O60831 178 aa11.9□□□□□ -0.5
LIME1-209ENST00000494776 P2RY1P47900 373 aa11.9□□□□□ -0.5
LIME1-209ENST00000494776 EIF2B2P49770 351 aaKnown RBP11.9□□□□□ -0.5
LIME1-209ENST00000494776 CMC4P56277 68 aaPredicted RBP11.9□□□□□ -0.5
LIME1-209ENST00000494776 TAS2R30P59541 319 aa11.9□□□□□ -0.5
LIME1-209ENST00000494776 ZNF90Q03938 601 aa11.9□□□□□ -0.5
LIME1-209ENST00000494776 HAGHQ16775 308 aa11.9□□□□□ -0.5
LIME1-209ENST00000494776 FAM90A2PQ658T7 463 aa11.9□□□□□ -0.5
LIME1-209ENST00000494776 LILRB2Q8N423 598 aa11.9□□□□□ -0.5
LIME1-209ENST00000494776 PFDN2Q9UHV9 154 aa11.9□□□□□ -0.5
LIME1-209ENST00000494776 RBMY1BA6NDE4 496 aaKnown RBP11.89□□□□□ -0.51
LIME1-209ENST00000494776 RBMY1EA6NEQ0 496 aaKnown RBP11.89□□□□□ -0.51
LIME1-209ENST00000494776 SNRPGP15A8MWD9 76 aa11.89□□□□□ -0.51
LIME1-209ENST00000494776 PRSS46E5RG02 174 aa11.89□□□□□ -0.51
LIME1-209ENST00000494776 TSC22D2O75157 780 aa11.89□□□□□ -0.51
LIME1-209ENST00000494776 RBMY1DP0C7P1 496 aaKnown RBP11.89□□□□□ -0.51
LIME1-209ENST00000494776 METTL15P1P0C7V9 234 aa11.89□□□□□ -0.51
LIME1-209ENST00000494776 BCAP31P51572 246 aa11.89□□□□□ -0.51
LIME1-209ENST00000494776 PAX9P55771 341 aa11.89□□□□□ -0.51
LIME1-209ENST00000494776 OR2F1Q13607 317 aa11.89□□□□□ -0.51
LIME1-209ENST00000494776 USF2Q15853 346 aaPredicted RBP11.89□□□□□ -0.51
LIME1-209ENST00000494776 ACOT7LQ6ZUV0 252 aa11.89□□□□□ -0.51
LIME1-209ENST00000494776 OR10P1Q8NGE3 313 aa11.89□□□□□ -0.51
LIME1-209ENST00000494776 RNF125Q96EQ8 232 aa11.89□□□□□ -0.51
LIME1-209ENST00000494776 RCHY1Q96PM5 261 aa11.89□□□□□ -0.51
LIME1-209ENST00000494776 TRGV9Q99603 122 aa11.89□□□□□ -0.51
LIME1-209ENST00000494776 MS4A6AQ9H2W1 248 aa11.89□□□□□ -0.51
LIME1-209ENST00000494776 IGKV1D-37A0A075B6S9 117 aa11.88□□□□□ -0.51
LIME1-209ENST00000494776 K7EPK0 472 aa11.88□□□□□ -0.51
LIME1-209ENST00000494776 PVALBP20472 110 aaPredicted RBP11.88□□□□□ -0.51
LIME1-209ENST00000494776 S100A10P60903 97 aa11.88□□□□□ -0.51
LIME1-209ENST00000494776 LYZP61626 148 aa11.88□□□□□ -0.51
LIME1-209ENST00000494776 RRAS2P62070 204 aaPredicted RBP11.88□□□□□ -0.51
LIME1-209ENST00000494776 THAP8Q8NA92 274 aa11.88□□□□□ -0.51
LIME1-209ENST00000494776 STXBP6Q8NFX7 210 aa11.88□□□□□ -0.51
LIME1-209ENST00000494776 SPATA25Q9BR10 227 aa11.88□□□□□ -0.51
LIME1-209ENST00000494776 TM2D3Q9BRN9 247 aa11.88□□□□□ -0.51
LIME1-209ENST00000494776 LOC102724200A0A096LPH7 203 aaPredicted RBP11.87□□□□□ -0.51
LIME1-209ENST00000494776 C7orf66A4D0T2 115 aa11.87□□□□□ -0.51
LIME1-209ENST00000494776 HELTA6NFD8 242 aa11.87□□□□□ -0.51
LIME1-209ENST00000494776 GOSR2O14653 212 aa11.87□□□□□ -0.51
LIME1-209ENST00000494776 NUP62P37198 522 aaPredicted RBP11.87□□□□□ -0.51
LIME1-209ENST00000494776 TMEM14EPQ6UXP3 125 aa11.87□□□□□ -0.51
LIME1-209ENST00000494776 PPP1R14BQ96C90 147 aa11.87□□□□□ -0.51
LIME1-209ENST00000494776 MARVELD1Q9BSK0 173 aa11.87□□□□□ -0.51
LIME1-209ENST00000494776 GGTLC1Q9BX51 225 aa11.87□□□□□ -0.51
LIME1-209ENST00000494776 MGAT4CQ9UBM8 478 aa11.87□□□□□ -0.51
LIME1-209ENST00000494776 U3KQE9 123 aa11.87□□□□□ -0.51
LIME1-209ENST00000494776 IGKV1OR2-108A0A075B7D4 117 aa11.86□□□□□ -0.51
LIME1-209ENST00000494776 CCNKO75909 580 aa11.86□□□□□ -0.51
LIME1-209ENST00000494776 CFDP00746 253 aaPredicted RBP11.86□□□□□ -0.51
LIME1-209ENST00000494776 CAV2P51636 162 aa11.86□□□□□ -0.51
LIME1-209ENST00000494776 AP2S1P53680 142 aaPredicted RBP11.86□□□□□ -0.51
LIME1-209ENST00000494776 ODF3L2Q3SX64 289 aa11.86□□□□□ -0.51
LIME1-209ENST00000494776 C16orf54Q6UWD8 224 aa11.86□□□□□ -0.51
LIME1-209ENST00000494776 LINC00322Q6ZN03 302 aaPredicted RBP11.86□□□□□ -0.51
LIME1-209ENST00000494776 TMEM144Q7Z5S9 345 aa11.86□□□□□ -0.51
LIME1-209ENST00000494776 APRG1Q8IVJ8 170 aa11.86□□□□□ -0.51
LIME1-209ENST00000494776 BPIFCQ8NFQ6 507 aa11.86□□□□□ -0.51
LIME1-209ENST00000494776 WWC2-AS2Q96NR7 200 aa11.86□□□□□ -0.51
LIME1-209ENST00000494776 CITED4Q96RK1 184 aa11.86□□□□□ -0.51
LIME1-209ENST00000494776 FAM110AQ9BQ89 295 aa11.86□□□□□ -0.51
LIME1-209ENST00000494776 TRAV2A0A0B4J234 112 aa11.85□□□□□ -0.51
LIME1-209ENST00000494776 PMS2P5A8MQ11 134 aa11.85□□□□□ -0.51
LIME1-209ENST00000494776 SSNA1O43805 119 aa11.85□□□□□ -0.51
LIME1-209ENST00000494776 DLK1P80370 383 aa11.85□□□□□ -0.51
LIME1-209ENST00000494776 NPVFQ9HCQ7 196 aa11.85□□□□□ -0.51
LIME1-209ENST00000494776 BUB3O43684 328 aa11.84□□□□□ -0.51
LIME1-209ENST00000494776 SIX6O95475 246 aa11.84□□□□□ -0.51
LIME1-209ENST00000494776 RAB32Q13637 225 aa11.84□□□□□ -0.51
LIME1-209ENST00000494776 SIGLEC15Q6ZMC9 328 aa11.84□□□□□ -0.51
LIME1-209ENST00000494776 GLMPQ8WWB7 406 aa11.84□□□□□ -0.51
LIME1-209ENST00000494776 MAP6D1Q9H9H5 199 aa11.84□□□□□ -0.51
LIME1-209ENST00000494776 COL7A1Q02388 2944 aa11.84□□□□□ -0.51
LIME1-209ENST00000494776 DNAH9Q9NYC9 4486 aa11.84□□□□□ -0.51
LIME1-209ENST00000494776 FAM24AA6NFZ4 105 aa11.83□□□□□ -0.52
LIME1-209ENST00000494776 FNDC10F2Z333 226 aa11.83□□□□□ -0.52
LIME1-209ENST00000494776 RLN2P04090 185 aa11.83□□□□□ -0.52
LIME1-209ENST00000494776 RPL35AP18077 110 aaKnown RBP11.83□□□□□ -0.52
LIME1-209ENST00000494776 ORM2P19652 201 aa11.83□□□□□ -0.52
LIME1-209ENST00000494776 GATA2P23769 480 aaPredicted RBP11.83□□□□□ -0.52
LIME1-209ENST00000494776 S100A7P31151 101 aa11.83□□□□□ -0.52
LIME1-209ENST00000494776 APOC4P55056 127 aa11.83□□□□□ -0.52
LIME1-209ENST00000494776 DEFB131AP59861 70 aa11.83□□□□□ -0.52
LIME1-209ENST00000494776 CYP2G1PQ6ZSU1 146 aa11.83□□□□□ -0.52
LIME1-209ENST00000494776 K7EQG2 157 aa11.82□□□□□ -0.52
LIME1-209ENST00000494776 CST7O76096 145 aa11.82□□□□□ -0.52
LIME1-209ENST00000494776 CYCSP99999 105 aaKnown RBP11.82□□□□□ -0.52
LIME1-209ENST00000494776 ARL16Q0P5N6 197 aa11.82□□□□□ -0.52
LIME1-209ENST00000494776 ZNF124Q15973 351 aa11.82□□□□□ -0.52
LIME1-209ENST00000494776 TEPPQ6URK8 271 aa11.82□□□□□ -0.52
LIME1-209ENST00000494776 OR1B1Q8NGR6 318 aa11.82□□□□□ -0.52
LIME1-209ENST00000494776 TMEM147Q9BVK8 224 aa11.82□□□□□ -0.52
LIME1-209ENST00000494776 GGACTQ9BVM4 153 aa11.82□□□□□ -0.52
LIME1-209ENST00000494776 RETNQ9HD89 108 aa11.82□□□□□ -0.52
LIME1-209ENST00000494776 FBXL17Q9UF56 701 aa11.82□□□□□ -0.52
LIME1-209ENST00000494776 DEDDO75618 318 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms