RNA–Protein interactions for RNA: ENST00000492723.1

TOM1-216, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-216ENST00000492723 TEX38Q6PEX7 206 aa13.23□□□□□ -0.29
TOM1-216ENST00000492723 UTP20O75691 2785 aaKnown RBP13.23□□□□□ -0.29
TOM1-216ENST00000492723 NDUFA6P56556 154 aa13.23□□□□□ -0.29
TOM1-216ENST00000492723 FAM3BP58499 235 aaPredicted RBP13.23□□□□□ -0.29
TOM1-216ENST00000492723 ASPHD1Q5U4P2 390 aa13.23□□□□□ -0.29
TOM1-216ENST00000492723 STXBP6Q8NFX7 210 aa13.23□□□□□ -0.29
TOM1-216ENST00000492723 FRZBQ92765 325 aa13.23□□□□□ -0.29
TOM1-216ENST00000492723 SRD5A3Q9H8P0 318 aa13.23□□□□□ -0.29
TOM1-216ENST00000492723 IGHV4-61A0A0C4DH41 118 aa13.22□□□□□ -0.29
TOM1-216ENST00000492723 OR10G8Q8NGN5 311 aa13.22□□□□□ -0.29
TOM1-216ENST00000492723 LY96Q9Y6Y9 160 aa13.22□□□□□ -0.29
TOM1-216ENST00000492723 SPG11Q96JI7 2443 aa13.22□□□□□ -0.29
TOM1-216ENST00000492723 A0A0U1RQK1 487 aa13.22□□□□□ -0.29
TOM1-216ENST00000492723 NPFFO15130 113 aa13.22□□□□□ -0.29
TOM1-216ENST00000492723 GGCTO75223 188 aaKnown RBP13.22□□□□□ -0.29
TOM1-216ENST00000492723 IGKV1-17P01599 117 aa13.22□□□□□ -0.29
TOM1-216ENST00000492723 BRS3P32247 399 aa13.22□□□□□ -0.29
TOM1-216ENST00000492723 ATP5J2P56134 94 aa13.22□□□□□ -0.29
TOM1-216ENST00000492723 PLP1P60201 277 aa13.22□□□□□ -0.29
TOM1-216ENST00000492723 LEMD1Q68G75 181 aa13.22□□□□□ -0.29
TOM1-216ENST00000492723 BLNKQ8WV28 456 aa13.22□□□□□ -0.29
TOM1-216ENST00000492723 HIGD1AQ9Y241 93 aa13.22□□□□□ -0.29
TOM1-216ENST00000492723 S4R3C0 116 aa13.22□□□□□ -0.29
TOM1-216ENST00000492723 NPIPB5A8MRT5 1133 aa13.21□□□□□ -0.29
TOM1-216ENST00000492723 TRGC1P0CF51 173 aa13.21□□□□□ -0.29
TOM1-216ENST00000492723 RD3LP0DJH9 198 aa13.21□□□□□ -0.29
TOM1-216ENST00000492723 PIP4P2Q8N4L2 257 aa13.21□□□□□ -0.29
TOM1-216ENST00000492723 C10orf105Q8TEF2 133 aa13.21□□□□□ -0.29
TOM1-216ENST00000492723 RANP62826 216 aaKnown RBP13.21□□□□□ -0.3
TOM1-216ENST00000492723 OR5I1Q13606 314 aa13.21□□□□□ -0.3
TOM1-216ENST00000492723 CLEC2AQ6UVW9 174 aa13.21□□□□□ -0.3
TOM1-216ENST00000492723 ZNF329Q86UD4 541 aa13.21□□□□□ -0.3
TOM1-216ENST00000492723 Q8N9W7 124 aa13.21□□□□□ -0.3
TOM1-216ENST00000492723 SGMS2Q8NHU3 365 aa13.21□□□□□ -0.3
TOM1-216ENST00000492723 BBC3Q96PG8 261 aaPredicted RBP13.21□□□□□ -0.3
TOM1-216ENST00000492723 C1RLQ9NZP8 487 aa13.21□□□□□ -0.3
TOM1-216ENST00000492723 ZNF462Q96JM2 2506 aa13.2□□□□□ -0.3
TOM1-216ENST00000492723 CENPVL3A0A0U1RRI6 287 aa13.2□□□□□ -0.3
TOM1-216ENST00000492723 FANCD2OSQ96PS1 177 aa13.2□□□□□ -0.3
TOM1-216ENST00000492723 POLR3KQ9Y2Y1 108 aaPredicted RBP13.2□□□□□ -0.3
TOM1-216ENST00000492723 IGLV11-55A0A075B6I3 123 aa13.2□□□□□ -0.3
TOM1-216ENST00000492723 IGHV7-81A0A0B4J1V7 117 aa13.2□□□□□ -0.3
TOM1-216ENST00000492723 TTC9CQ8N5M4 171 aa13.2□□□□□ -0.3
TOM1-216ENST00000492723 IMMP2LQ96T52 175 aa13.2□□□□□ -0.3
TOM1-216ENST00000492723 SPOCK3Q9BQ16 436 aa13.2□□□□□ -0.3
TOM1-216ENST00000492723 ABCA2Q9BZC7 2435 aa13.19□□□□□ -0.3
TOM1-216ENST00000492723 PHOX2AO14813 284 aa13.19□□□□□ -0.3
TOM1-216ENST00000492723 FABP1P07148 127 aa13.19□□□□□ -0.3
TOM1-216ENST00000492723 S100A12P80511 92 aa13.19□□□□□ -0.3
TOM1-216ENST00000492723 LINC00479Q96M42 142 aa13.19□□□□□ -0.3
TOM1-216ENST00000492723 IGHV3OR16-10A0A075B7F0 116 aa13.19□□□□□ -0.3
TOM1-216ENST00000492723 NBEAP1P0C6P0 100 aa13.19□□□□□ -0.3
TOM1-216ENST00000492723 ERVFC1-1P60608 527 aa13.19□□□□□ -0.3
TOM1-216ENST00000492723 FOXL1Q12952 345 aa13.19□□□□□ -0.3
TOM1-216ENST00000492723 CRYBG3Q68DQ2 2970 aa13.18□□□□□ -0.3
TOM1-216ENST00000492723 NDUFS8O00217 210 aa13.18□□□□□ -0.3
TOM1-216ENST00000492723 SLC17A3O00476 420 aa13.18□□□□□ -0.3
TOM1-216ENST00000492723 S100A8P05109 93 aa13.18□□□□□ -0.3
TOM1-216ENST00000492723 GP9P14770 177 aa13.18□□□□□ -0.3
TOM1-216ENST00000492723 PAX8Q06710 450 aa13.18□□□□□ -0.3
TOM1-216ENST00000492723 SLC25A39Q9BZJ4 359 aaPredicted RBP13.18□□□□□ -0.3
TOM1-216ENST00000492723 MAP1AP78559 2803 aaPredicted RBP13.18□□□□□ -0.3
TOM1-216ENST00000492723 PEX7O00628 323 aa13.18□□□□□ -0.3
TOM1-216ENST00000492723 GNG7O60262 68 aa13.18□□□□□ -0.3
TOM1-216ENST00000492723 EGR2P11161 476 aaPredicted RBP13.18□□□□□ -0.3
TOM1-216ENST00000492723 IGF2BP2-AS1Q96M15 143 aa13.18□□□□□ -0.3
TOM1-216ENST00000492723 IGHV4-30-2A0A087WSY4 118 aa13.17□□□□□ -0.3
TOM1-216ENST00000492723 ZNF320A2RRD8 509 aa13.17□□□□□ -0.3
TOM1-216ENST00000492723 H3BTX0 84 aa13.17□□□□□ -0.3
TOM1-216ENST00000492723 HLA-DRB1P01911 266 aa13.17□□□□□ -0.3
TOM1-216ENST00000492723 HOXA5P20719 270 aa13.17□□□□□ -0.3
TOM1-216ENST00000492723 CNN1P51911 297 aaKnown RBP13.17□□□□□ -0.3
TOM1-216ENST00000492723 HSPB9Q9BQS6 159 aa13.17□□□□□ -0.3
TOM1-216ENST00000492723 VWC2LB2RUY7 222 aa13.17□□□□□ -0.3
TOM1-216ENST00000492723 TYMSP04818 313 aa13.17□□□□□ -0.3
TOM1-216ENST00000492723 MGST1P10620 155 aaKnown RBP13.17□□□□□ -0.3
TOM1-216ENST00000492723 MFAP4P55083 255 aa13.17□□□□□ -0.3
TOM1-216ENST00000492723 ZNF600Q6ZNG1 722 aa13.17□□□□□ -0.3
TOM1-216ENST00000492723 CDC42EP3Q9UKI2 254 aa13.17□□□□□ -0.3
TOM1-216ENST00000492723 OR2J3O76001 311 aa13.16□□□□□ -0.3
TOM1-216ENST00000492723 SLC25A5P05141 298 aaKnown RBP13.16□□□□□ -0.3
TOM1-216ENST00000492723 MYCNOSP40205 109 aa13.16□□□□□ -0.3
TOM1-216ENST00000492723 GNG5P63218 68 aa13.16□□□□□ -0.3
TOM1-216ENST00000492723 NHLRC2Q8NBF2 726 aa13.16□□□□□ -0.3
TOM1-216ENST00000492723 THYN1Q9P016 225 aa13.16□□□□□ -0.3
TOM1-216ENST00000492723 MRPL27Q9P0M9 148 aaKnown RBP13.16□□□□□ -0.3
TOM1-216ENST00000492723 TRAV34A0A0B4J273 112 aa13.16□□□□□ -0.3
TOM1-216ENST00000492723 PGPA6NDG6 321 aa13.16□□□□□ -0.3
TOM1-216ENST00000492723 TOMM40O96008 361 aa13.16□□□□□ -0.3
TOM1-216ENST00000492723 IGLV2-8P01709 118 aa13.16□□□□□ -0.3
TOM1-216ENST00000492723 Q56UQ5 140 aa13.16□□□□□ -0.3
TOM1-216ENST00000492723 NRGNQ92686 78 aa13.16□□□□□ -0.3
TOM1-216ENST00000492723 RNASE7Q9H1E1 156 aaKnown RBP13.16□□□□□ -0.3
TOM1-216ENST00000492723 IL36BQ9NZH7 164 aa13.16□□□□□ -0.3
TOM1-216ENST00000492723 NDUFB8O95169 186 aa13.15□□□□□ -0.3
TOM1-216ENST00000492723 IGHV3-23P01764 117 aa13.15□□□□□ -0.3
TOM1-216ENST00000492723 IL4P05112 153 aa13.15□□□□□ -0.3
TOM1-216ENST00000492723 S100A9P06702 114 aaKnown RBP13.15□□□□□ -0.3
TOM1-216ENST00000492723 SMIM6P0DI80 62 aa13.15□□□□□ -0.3
TOM1-216ENST00000492723 TAS2R60P59551 318 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms