RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 C16orf54Q6UWD8 224 aa12.86□□□□□ -0.35
SEC13-218ENST00000490283 PBDC1Q9BVG4 233 aa12.86□□□□□ -0.35
SEC13-218ENST00000490283 U3KQE9 123 aa12.86□□□□□ -0.35
SEC13-218ENST00000490283 CXorf65A6NEN9 183 aa12.85□□□□□ -0.35
SEC13-218ENST00000490283 WRBO00258 174 aa12.85□□□□□ -0.35
SEC13-218ENST00000490283 CA1P00915 261 aaPredicted RBP12.85□□□□□ -0.35
SEC13-218ENST00000490283 ZNF688P0C7X2 276 aa12.85□□□□□ -0.35
SEC13-218ENST00000490283 GAMTQ14353 236 aa12.85□□□□□ -0.35
SEC13-218ENST00000490283 CNPY1Q3B7I2 92 aa12.85□□□□□ -0.35
SEC13-218ENST00000490283 C4orf46Q504U0 113 aa12.85□□□□□ -0.35
SEC13-218ENST00000490283 FAM24BQ8N5W8 94 aa12.85□□□□□ -0.35
SEC13-218ENST00000490283 GLMPQ8WWB7 406 aa12.85□□□□□ -0.35
SEC13-218ENST00000490283 RNF125Q96EQ8 232 aa12.85□□□□□ -0.35
SEC13-218ENST00000490283 MAGT1Q9H0U3 335 aa12.85□□□□□ -0.35
SEC13-218ENST00000490283 OR4E1P0C645 316 aa12.84□□□□□ -0.35
SEC13-218ENST00000490283 IL7P13232 177 aa12.84□□□□□ -0.35
SEC13-218ENST00000490283 SNRPD3P62318 126 aaKnown RBP12.84□□□□□ -0.35
SEC13-218ENST00000490283 OR8G2PQ6IF36 304 aa12.84□□□□□ -0.35
SEC13-218ENST00000490283 SIGLEC15Q6ZMC9 328 aa12.84□□□□□ -0.35
SEC13-218ENST00000490283 RARRES2Q99969 163 aa12.84□□□□□ -0.35
SEC13-218ENST00000490283 SNRPGP15A8MWD9 76 aa12.83□□□□□ -0.36
SEC13-218ENST00000490283 LYZP61626 148 aa12.83□□□□□ -0.36
SEC13-218ENST00000490283 PMS2P11Q13670 270 aa12.83□□□□□ -0.36
SEC13-218ENST00000490283 SPANXN5Q5MJ07 72 aa12.83□□□□□ -0.36
SEC13-218ENST00000490283 DCANP1Q8TF63 244 aa12.83□□□□□ -0.36
SEC13-218ENST00000490283 PPP1R14BQ96C90 147 aa12.83□□□□□ -0.36
SEC13-218ENST00000490283 FLVCR2Q9UPI3 526 aa12.83□□□□□ -0.36
SEC13-218ENST00000490283 STRAPQ9Y3F4 350 aaKnown RBP12.83□□□□□ -0.36
SEC13-218ENST00000490283 BUB3O43684 328 aa12.82□□□□□ -0.36
SEC13-218ENST00000490283 ADAP1O75689 374 aa12.82□□□□□ -0.36
SEC13-218ENST00000490283 ATF4P18848 351 aaPredicted RBP12.82□□□□□ -0.36
SEC13-218ENST00000490283 TMEM41BQ5BJD5 291 aa12.82□□□□□ -0.36
SEC13-218ENST00000490283 PSMG4Q5JS54 123 aa12.82□□□□□ -0.36
SEC13-218ENST00000490283 TRGV9Q99603 122 aa12.82□□□□□ -0.36
SEC13-218ENST00000490283 SDHCQ99643 169 aaPredicted RBP12.82□□□□□ -0.36
SEC13-218ENST00000490283 NRN1Q9NPD7 142 aa12.82□□□□□ -0.36
SEC13-218ENST00000490283 FBXL17Q9UF56 701 aa12.82□□□□□ -0.36
SEC13-218ENST00000490283 NUPR2A6NF83 97 aa12.81□□□□□ -0.36
SEC13-218ENST00000490283 CFDP00746 253 aaPredicted RBP12.81□□□□□ -0.36
SEC13-218ENST00000490283 SPP1P10451 314 aa12.81□□□□□ -0.36
SEC13-218ENST00000490283 ANXA7P20073 488 aaKnown RBP12.81□□□□□ -0.36
SEC13-218ENST00000490283 NKX2-1P43699 371 aaPredicted RBP12.81□□□□□ -0.36
SEC13-218ENST00000490283 ZNF90Q03938 601 aa12.81□□□□□ -0.36
SEC13-218ENST00000490283 MORN3Q6PF18 240 aaPredicted RBP12.81□□□□□ -0.36
SEC13-218ENST00000490283 OR11H2Q8NH07 326 aa12.81□□□□□ -0.36
SEC13-218ENST00000490283 IGKV1D-37A0A075B6S9 117 aa12.8□□□□□ -0.36
SEC13-218ENST00000490283 H3BP45 60 aa12.8□□□□□ -0.36
SEC13-218ENST00000490283 S100A7P31151 101 aa12.8□□□□□ -0.36
SEC13-218ENST00000490283 AKR1C1Q04828 323 aa12.8□□□□□ -0.36
SEC13-218ENST00000490283 OR2F1Q13607 317 aa12.8□□□□□ -0.36
SEC13-218ENST00000490283 ACTL10Q5JWF8 245 aa12.8□□□□□ -0.36
SEC13-218ENST00000490283 TRPT1Q86TN4 253 aaKnown RBP12.8□□□□□ -0.36
SEC13-218ENST00000490283 SEPSECSQ9HD40 501 aaKnown RBP12.8□□□□□ -0.36
SEC13-218ENST00000490283 KNCNA6PVL3 124 aa12.79□□□□□ -0.36
SEC13-218ENST00000490283 BTCP35070 178 aa12.79□□□□□ -0.36
SEC13-218ENST00000490283 POLR2GP62487 172 aaKnown RBP eCLIP12.79□□□□□ -0.36
SEC13-218ENST00000490283 ID3Q02535 119 aa12.79□□□□□ -0.36
SEC13-218ENST00000490283 C1orf194Q5T5A4 169 aa12.79□□□□□ -0.36
SEC13-218ENST00000490283 THAP8Q8NA92 274 aa12.79□□□□□ -0.36
SEC13-218ENST00000490283 C20orf85Q9H1P6 137 aa12.79□□□□□ -0.36
SEC13-218ENST00000490283 PSENENQ9NZ42 101 aa12.79□□□□□ -0.36
SEC13-218ENST00000490283 SMCO3A2RU48 225 aa12.78□□□□□ -0.36
SEC13-218ENST00000490283 LYRM1O43325 122 aa12.78□□□□□ -0.36
SEC13-218ENST00000490283 SSSCA1O60232 199 aa12.78□□□□□ -0.36
SEC13-218ENST00000490283 SCGB1D2O95969 90 aa12.78□□□□□ -0.36
SEC13-218ENST00000490283 ID1P41134 155 aa12.78□□□□□ -0.36
SEC13-218ENST00000490283 NUTF2P61970 127 aaKnown RBP12.78□□□□□ -0.36
SEC13-218ENST00000490283 IAH1Q2TAA2 248 aaPredicted RBP12.78□□□□□ -0.36
SEC13-218ENST00000490283 BPIFCQ8NFQ6 507 aa12.78□□□□□ -0.36
SEC13-218ENST00000490283 OR4D5Q8NGN0 318 aa12.78□□□□□ -0.36
SEC13-218ENST00000490283 RAB40CQ96S21 281 aa12.78□□□□□ -0.36
SEC13-218ENST00000490283 KLK5Q9Y337 293 aaPredicted RBP12.78□□□□□ -0.36
SEC13-218ENST00000490283 TENM2Q9NT68 2774 aa12.77□□□□□ -0.36
SEC13-218ENST00000490283 SAMD13Q5VXD3 122 aa12.77□□□□□ -0.37
SEC13-218ENST00000490283 ACOT7LQ6ZUV0 252 aa12.77□□□□□ -0.37
SEC13-218ENST00000490283 OR8I2Q8N0Y5 310 aa12.77□□□□□ -0.37
SEC13-218ENST00000490283 MITD1Q8WV92 249 aa12.77□□□□□ -0.37
SEC13-218ENST00000490283 CCDC32Q9BV29 185 aa12.77□□□□□ -0.37
SEC13-218ENST00000490283 MFFQ9GZY8 342 aa12.77□□□□□ -0.37
SEC13-218ENST00000490283 C11orf68Q9H3H3 251 aaKnown RBP12.77□□□□□ -0.37
SEC13-218ENST00000490283 RYR3Q15413 4870 aa12.77□□□□□ -0.37
SEC13-218ENST00000490283 DYNC2H1Q8NCM8 4307 aaKnown RBP12.77□□□□□ -0.37
SEC13-218ENST00000490283 PRSS46E5RG02 174 aa12.76□□□□□ -0.37
SEC13-218ENST00000490283 EWSR1Q01844 656 aaKnown RBP eCLIP12.76□□□□□ -0.37
SEC13-218ENST00000490283 ZNF846Q147U1 533 aa12.76□□□□□ -0.37
SEC13-218ENST00000490283 CEMP1Q6PRD7 247 aaPredicted RBP12.76□□□□□ -0.37
SEC13-218ENST00000490283 SMIM8Q96KF7 97 aa12.76□□□□□ -0.37
SEC13-218ENST00000490283 GSKIPQ9P0R6 139 aa12.76□□□□□ -0.37
SEC13-218ENST00000490283 SLC45A2Q9UMX9 530 aa12.76□□□□□ -0.37
SEC13-218ENST00000490283 IGKV1OR2-108A0A075B7D4 117 aa12.75□□□□□ -0.37
SEC13-218ENST00000490283 PLA2G10O15496 165 aa12.75□□□□□ -0.37
SEC13-218ENST00000490283 CSMD3Q7Z407 3707 aa12.75□□□□□ -0.37
SEC13-218ENST00000490283 C11orf45Q8TAV5 145 aa12.75□□□□□ -0.37
SEC13-218ENST00000490283 TMEM147Q9BVK8 224 aa12.75□□□□□ -0.37
SEC13-218ENST00000490283 C1QTNF4Q9BXJ3 329 aa12.75□□□□□ -0.37
SEC13-218ENST00000490283 STARD9Q9P2P6 4700 aa12.74□□□□□ -0.37
SEC13-218ENST00000490283 TCRBP04435 133 aa12.74□□□□□ -0.37
SEC13-218ENST00000490283 ORM2P19652 201 aa12.74□□□□□ -0.37
SEC13-218ENST00000490283 GALR1P47211 349 aa12.74□□□□□ -0.37
SEC13-218ENST00000490283 MEOX2P50222 304 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms