RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 RPL26L1Q9UNX3 145 aaKnown RBP2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 COL12A1Q99715 3063 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 URB1O60287 2271 aaKnown RBP2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 SEC16AO15027 2179 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 IGLV3-16A0A075B6K0 115 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 A0A1B0GV90 55 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 IZUMO1RA6ND01 250 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 LGALS1P09382 135 aaKnown RBP2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 CSRP1P21291 193 aaKnown RBP2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 CRYBB3P26998 211 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 AKR1C3P42330 323 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 ZNF616Q08AN1 781 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 KLHL12Q53G59 568 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 SMARCD3Q6STE5 483 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 KRTAP11-1Q8IUC1 163 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 PCP2Q8IVA1 136 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 OR52R1Q8NGF1 315 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 OR4C6Q8NH72 309 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 GPR119Q8TDV5 335 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 MAGOHBQ96A72 148 aaKnown RBP2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 CCDC115Q96NT0 180 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 GPR82Q96P67 336 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 TBL1YQ9BQ87 522 aa2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 LYRM2Q9NU23 88 aaPredicted RBP2.06□□□□□ -2.08
DEPDC1-204ENST00000489862 PTPRQQ9UMZ3 2332 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 FLNCQ14315 2725 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 ZFC3H1O60293 1989 aaKnown RBP2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 NBPF19A0A087WUL8 3843 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 ZNF106Q9H2Y7 1883 aaKnown RBP2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 A8MWP4 228 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 G3V2T6 193 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 PLA2G10O15496 165 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 SLC25A14O95258 325 aaPredicted RBP2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 CRYZL1O95825 349 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 TRGV3P03979 118 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 MAS1P04201 325 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 RPS3P23396 243 aaKnown RBP eCLIP2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 ERP29P30040 261 aaKnown RBP2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 CA7P43166 264 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 FABP9Q0Z7S8 132 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 CCSMST1Q4G0I0 132 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 AKR1C8PQ5T2L2 129 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 HRCT1Q6UXD1 115 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 TIFABQ6ZNK6 161 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 FAM24BQ8N5W8 94 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 OR13C8Q8NGS7 320 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 FRZBQ92765 325 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 ROPN1LQ96C74 230 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 ZNF382Q96SR6 550 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 AIF1LQ9BQI0 150 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 SH3BGRL3Q9H299 93 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 PARVBQ9HBI1 364 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 PRTFDC1Q9NRG1 225 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 RASL12Q9NYN1 266 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 RPUSD1Q9UJJ7 312 aaKnown RBP2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 AMMECR1Q9Y4X0 333 aaPredicted RBP2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 HSPB11Q9Y547 144 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 PHLDA3Q9Y5J5 127 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 TENM4Q6N022 2769 aa2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 PRRC2AP48634 2157 aaKnown RBP2.05□□□□□ -2.08
DEPDC1-204ENST00000489862 COL5A1P20908 1838 aaPredicted RBP2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 TLN1Q9Y490 2541 aaKnown RBP2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 UTP20O75691 2785 aaKnown RBP2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 CACNA1BQ00975 2339 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 SNRNP200O75643 2136 aaKnown RBP2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 IGHV3-43A0A0B4J1X8 118 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 TRAV4A0A0B4J268 109 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 LOC102725191A0A1B0GVB3 256 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 C9JQL5 133 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 M0QZK8 103 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 OR2J2O76002 312 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 WISP3O95389 354 aaPredicted RBP2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 TNFP01375 233 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 IGKV1D-33P01593 117 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 IGKV1-33P01594 117 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 OR5AC1P0C628 307 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 OR10J4P0C629 311 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 C1GALT1C1LP0DN25 315 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 CCL4P13236 92 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 ZNF32P17041 273 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 SPI1P17947 270 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 PEBP1P30086 187 aaKnown RBP2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 CKS1BP61024 79 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 FGF12P61328 243 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 PSG7Q13046 419 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 SPCS2Q15005 226 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 MMDQ15546 238 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 WHAMMP3Q1A5X7 153 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 SMIM21Q3B7S5 101 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 CCDC58Q4VC31 144 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 ZFP1Q6P2D0 407 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 TCF24Q7RTU0 167 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 MMGT1Q8N4V1 131 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 ZNF561Q8N587 486 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 ZNF439Q8NDP4 499 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 GNPDA2Q8TDQ7 276 aa2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 RBPMSQ93062 196 aaKnown RBP2.04□□□□□ -2.08
DEPDC1-204ENST00000489862 PYURFQ96I23 114 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms