RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 ZNF331Q9NQX6 463 aaPredicted RBP11.36□□□□□ -0.59
ABCB1-207ENST00000488737 SLC25A5P05141 298 aaKnown RBP11.35□□□□□ -0.59
ABCB1-207ENST00000488737 NBEAP1P0C6P0 100 aa11.35□□□□□ -0.59
ABCB1-207ENST00000488737 FAM87AP0C7U9 286 aa11.35□□□□□ -0.59
ABCB1-207ENST00000488737 HIST1H1EP10412 219 aaKnown RBP11.35□□□□□ -0.59
ABCB1-207ENST00000488737 GP9P14770 177 aa11.35□□□□□ -0.59
ABCB1-207ENST00000488737 UCNP55089 124 aa11.35□□□□□ -0.59
ABCB1-207ENST00000488737 UBE2G1P62253 170 aa11.35□□□□□ -0.59
ABCB1-207ENST00000488737 USF2Q15853 346 aaPredicted RBP11.35□□□□□ -0.59
ABCB1-207ENST00000488737 RUSC1-AS1Q66K80 236 aa11.35□□□□□ -0.59
ABCB1-207ENST00000488737 NHLRC2Q8NBF2 726 aa11.35□□□□□ -0.59
ABCB1-207ENST00000488737 LY6G5BQ8NDX9 201 aa11.35□□□□□ -0.59
ABCB1-207ENST00000488737 HSPB9Q9BQS6 159 aa11.35□□□□□ -0.59
ABCB1-207ENST00000488737 SAMD10Q9BYL1 202 aa11.35□□□□□ -0.59
ABCB1-207ENST00000488737 C7orf69Q9H7B7 122 aa11.35□□□□□ -0.59
ABCB1-207ENST00000488737 LYNX1G3V0Z9 82 aa11.34□□□□□ -0.59
ABCB1-207ENST00000488737 SPINK4O60575 86 aa11.34□□□□□ -0.59
ABCB1-207ENST00000488737 LYNX1P0DP58 116 aa11.34□□□□□ -0.59
ABCB1-207ENST00000488737 MRPL54Q6P161 138 aaKnown RBP11.34□□□□□ -0.59
ABCB1-207ENST00000488737 TEX43Q6ZNM6 134 aa11.34□□□□□ -0.59
ABCB1-207ENST00000488737 C5orf17Q8NAS9 161 aa11.34□□□□□ -0.59
ABCB1-207ENST00000488737 NUDT10Q8NFP7 164 aa11.34□□□□□ -0.59
ABCB1-207ENST00000488737 SRSF12Q8WXF0 261 aaKnown RBP11.34□□□□□ -0.59
ABCB1-207ENST00000488737 NUDT11Q96G61 164 aa11.34□□□□□ -0.59
ABCB1-207ENST00000488737 ATG101Q9BSB4 218 aa11.34□□□□□ -0.59
ABCB1-207ENST00000488737 ACACBO00763 2458 aa11.34□□□□□ -0.59
ABCB1-207ENST00000488737 TRAV34A0A0B4J273 112 aa11.34□□□□□ -0.59
ABCB1-207ENST00000488737 ZNF705FA8MVS1 300 aaPredicted RBP11.34□□□□□ -0.59
ABCB1-207ENST00000488737 BMPR1BO00238 502 aa11.34□□□□□ -0.59
ABCB1-207ENST00000488737 SIAH2O43255 324 aa11.34□□□□□ -0.59
ABCB1-207ENST00000488737 APCSP02743 223 aa11.34□□□□□ -0.59
ABCB1-207ENST00000488737 LIPFP07098 398 aa11.34□□□□□ -0.59
ABCB1-207ENST00000488737 ZNF705DP0CH99 300 aaPredicted RBP11.34□□□□□ -0.59
ABCB1-207ENST00000488737 ZNF705BP0CI00 300 aaPredicted RBP11.34□□□□□ -0.59
ABCB1-207ENST00000488737 TPTE2P1Q5T6R2 138 aa11.34□□□□□ -0.59
ABCB1-207ENST00000488737 SIGLECL1Q8N7X8 197 aa11.34□□□□□ -0.59
ABCB1-207ENST00000488737 TSKUQ8WUA8 353 aa11.34□□□□□ -0.59
ABCB1-207ENST00000488737 FAM168AQ92567 244 aa11.34□□□□□ -0.59
ABCB1-207ENST00000488737 FMC1Q96HJ9 113 aa11.34□□□□□ -0.59
ABCB1-207ENST00000488737 KCNS1Q96KK3 526 aa11.34□□□□□ -0.59
ABCB1-207ENST00000488737 GPR82Q96P67 336 aa11.34□□□□□ -0.59
ABCB1-207ENST00000488737 TBX15Q96SF7 602 aa11.34□□□□□ -0.59
ABCB1-207ENST00000488737 HIGD1AQ9Y241 93 aa11.34□□□□□ -0.59
ABCB1-207ENST00000488737 PGPA6NDG6 321 aa11.33□□□□□ -0.6
ABCB1-207ENST00000488737 FAM90A27PA6NNH2 459 aa11.33□□□□□ -0.6
ABCB1-207ENST00000488737 F2Z2F3 143 aa11.33□□□□□ -0.6
ABCB1-207ENST00000488737 GPX1P07203 203 aa11.33□□□□□ -0.6
ABCB1-207ENST00000488737 COX7A1P24310 79 aa11.33□□□□□ -0.6
ABCB1-207ENST00000488737 GNG5P63218 68 aa11.33□□□□□ -0.6
ABCB1-207ENST00000488737 SLC35B1P78383 322 aa11.33□□□□□ -0.6
ABCB1-207ENST00000488737 ATP5L2Q7Z4Y8 100 aa11.33□□□□□ -0.6
ABCB1-207ENST00000488737 RBM14Q96PK6 669 aaKnown RBP11.33□□□□□ -0.6
ABCB1-207ENST00000488737 FBXL15Q9H469 300 aa11.33□□□□□ -0.6
ABCB1-207ENST00000488737 TMEM14CQ9P0S9 112 aa11.33□□□□□ -0.6
ABCB1-207ENST00000488737 I3L2K1 104 aa11.32□□□□□ -0.6
ABCB1-207ENST00000488737 TOMM40O96008 361 aa11.32□□□□□ -0.6
ABCB1-207ENST00000488737 IGLC1P0CG04 106 aa11.32□□□□□ -0.6
ABCB1-207ENST00000488737 SRIP30626 198 aa11.32□□□□□ -0.6
ABCB1-207ENST00000488737 DLX1P56177 255 aa11.32□□□□□ -0.6
ABCB1-207ENST00000488737 C19orf35Q6ZS72 473 aa11.32□□□□□ -0.6
ABCB1-207ENST00000488737 NUP35Q8NFH5 326 aa11.32□□□□□ -0.6
ABCB1-207ENST00000488737 BLNKQ8WV28 456 aa11.32□□□□□ -0.6
ABCB1-207ENST00000488737 MLST8Q9BVC4 326 aa11.32□□□□□ -0.6
ABCB1-207ENST00000488737 SSBP3Q9BWW4 388 aaPredicted RBP11.32□□□□□ -0.6
ABCB1-207ENST00000488737 ZNF586Q9NXT0 402 aa11.32□□□□□ -0.6
ABCB1-207ENST00000488737 ZNF253O75346 499 aa11.32□□□□□ -0.6
ABCB1-207ENST00000488737 CA1P00915 261 aaPredicted RBP11.32□□□□□ -0.6
ABCB1-207ENST00000488737 CT83Q5H943 113 aa11.32□□□□□ -0.6
ABCB1-207ENST00000488737 TOMM20LQ6UXN7 152 aa11.32□□□□□ -0.6
ABCB1-207ENST00000488737 C20orf144Q9BQM9 153 aa11.32□□□□□ -0.6
ABCB1-207ENST00000488737 RAB1BQ9H0U4 201 aa11.32□□□□□ -0.6
ABCB1-207ENST00000488737 MRPL27Q9P0M9 148 aaKnown RBP11.32□□□□□ -0.6
ABCB1-207ENST00000488737 ZNF492Q9P255 531 aa11.32□□□□□ -0.6
ABCB1-207ENST00000488737 SMG1Q96Q15 3661 aaKnown RBP11.31□□□□□ -0.6
ABCB1-207ENST00000488737 TLN1Q9Y490 2541 aaKnown RBP11.31□□□□□ -0.6
ABCB1-207ENST00000488737 LTAP01374 205 aa11.31□□□□□ -0.6
ABCB1-207ENST00000488737 APELAP0DMC3 54 aa11.31□□□□□ -0.6
ABCB1-207ENST00000488737 KIAA1644Q3SXP7 199 aa11.31□□□□□ -0.6
ABCB1-207ENST00000488737 OR11H6Q8NGC7 330 aa11.31□□□□□ -0.6
ABCB1-207ENST00000488737 TMEM68Q96MH6 324 aa11.31□□□□□ -0.6
ABCB1-207ENST00000488737 Q9H3A6 140 aa11.31□□□□□ -0.6
ABCB1-207ENST00000488737 ONECUT1Q9UBC0 465 aa11.31□□□□□ -0.6
ABCB1-207ENST00000488737 ITPR1Q14643 2758 aa11.31□□□□□ -0.6
ABCB1-207ENST00000488737 TCRAP04437 139 aa11.3□□□□□ -0.6
ABCB1-207ENST00000488737 PSG1P11464 419 aa11.3□□□□□ -0.6
ABCB1-207ENST00000488737 PLGLAQ15195 96 aa11.3□□□□□ -0.6
ABCB1-207ENST00000488737 ZNF600Q6ZNG1 722 aa11.3□□□□□ -0.6
ABCB1-207ENST00000488737 MRPL52Q86TS9 123 aaKnown RBP11.3□□□□□ -0.6
ABCB1-207ENST00000488737 TIMD4Q96H15 378 aa11.3□□□□□ -0.6
ABCB1-207ENST00000488737 OTORQ9NRC9 128 aa11.3□□□□□ -0.6
ABCB1-207ENST00000488737 PKD1L2Q7Z442 2459 aa11.3□□□□□ -0.6
ABCB1-207ENST00000488737 ANKHD1Q8IWZ3 2542 aaKnown RBP11.3□□□□□ -0.6
ABCB1-207ENST00000488737 IGHV3-21A0A0B4J1V1 117 aa11.29□□□□□ -0.6
ABCB1-207ENST00000488737 A0A1B0GV90 55 aa11.29□□□□□ -0.6
ABCB1-207ENST00000488737 A0A1W2PS18 150 aa11.29□□□□□ -0.6
ABCB1-207ENST00000488737 M0R1W7 72 aa11.29□□□□□ -0.6
ABCB1-207ENST00000488737 CCL21O00585 134 aa11.29□□□□□ -0.6
ABCB1-207ENST00000488737 ZNF324O75467 553 aaPredicted RBP11.29□□□□□ -0.6
ABCB1-207ENST00000488737 OR2J3O76001 311 aa11.29□□□□□ -0.6
ABCB1-207ENST00000488737 SNRPCP09234 159 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms