RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 OSTCQ9NRP0 149 aa2.08□□□□□ -2.08
HFM1-208ENST00000488023 RNF11Q9Y3C5 154 aa2.08□□□□□ -2.08
HFM1-208ENST00000488023 DISP2A7MBM2 1401 aa2.08□□□□□ -2.08
HFM1-208ENST00000488023 NRKQ7Z2Y5 1582 aa2.08□□□□□ -2.08
HFM1-208ENST00000488023 AGLP35573 1532 aa2.07□□□□□ -2.08
HFM1-208ENST00000488023 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.07□□□□□ -2.085e-23■■■■■ 209.5
HFM1-208ENST00000488023 TRAV40A0A0B4J280 105 aa2.07□□□□□ -2.08
HFM1-208ENST00000488023 A0A0J9YW62 118 aa2.07□□□□□ -2.08
HFM1-208ENST00000488023 H3BPC8 53 aa2.07□□□□□ -2.08
HFM1-208ENST00000488023 BCL9O00512 1426 aa2.07□□□□□ -2.08
HFM1-208ENST00000488023 RTL8CO15255 209 aa2.07□□□□□ -2.08
HFM1-208ENST00000488023 GADD45GO95257 159 aa2.07□□□□□ -2.08
HFM1-208ENST00000488023 FAM107AO95990 144 aa2.07□□□□□ -2.08
HFM1-208ENST00000488023 CXCL1P09341 107 aa2.07□□□□□ -2.08
HFM1-208ENST00000488023 BCL2P10415 239 aa2.07□□□□□ -2.08
HFM1-208ENST00000488023 SRP14P37108 136 aaKnown RBP2.07□□□□□ -2.08
HFM1-208ENST00000488023 SRP9P49458 86 aaKnown RBP2.07□□□□□ -2.08
HFM1-208ENST00000488023 RPS28P62857 69 aaKnown RBP2.07□□□□□ -2.08
HFM1-208ENST00000488023 EIF5AP63241 154 aaKnown RBP2.07□□□□□ -2.08
HFM1-208ENST00000488023 RHOGP84095 191 aa2.07□□□□□ -2.08
HFM1-208ENST00000488023 BIKQ13323 160 aa2.07□□□□□ -2.08
HFM1-208ENST00000488023 EBI3Q14213 229 aa2.07□□□□□ -2.08
HFM1-208ENST00000488023 MIR17HGQ75NE6 70 aa2.07□□□□□ -2.08
HFM1-208ENST00000488023 LHFPL1Q86WI0 220 aa2.07□□□□□ -2.08
HFM1-208ENST00000488023 HIST3H2BBQ8N257 126 aa2.07□□□□□ -2.08
HFM1-208ENST00000488023 TMEM229BQ8NBD8 167 aa2.07□□□□□ -2.08
HFM1-208ENST00000488023 CYYR1Q96J86 154 aa2.07□□□□□ -2.08
HFM1-208ENST00000488023 SLC25A21Q9BQT8 299 aaPredicted RBP2.07□□□□□ -2.08
HFM1-208ENST00000488023 HSPB8Q9UJY1 196 aa2.07□□□□□ -2.08
HFM1-208ENST00000488023 IQGAP1P46940 1657 aa2.07□□□□□ -2.08
HFM1-208ENST00000488023 MYO10Q9HD67 2058 aa2.07□□□□□ -2.08
HFM1-208ENST00000488023 A0A087X0T9 212 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 A0A1B0GX51 115 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 TMEM189A5PLL7 270 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 TLCD2A6NGC4 264 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 TP53I11O14683 189 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 PGLYRP1O75594 196 aaPredicted RBP2.06□□□□□ -2.08
HFM1-208ENST00000488023 COL8A2P25067 703 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 SDC4P31431 198 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 RNASE4P34096 147 aaKnown RBP2.06□□□□□ -2.08
HFM1-208ENST00000488023 BCL2L15Q5TBC7 163 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 AGTRAPQ6RW13 159 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 TRAPPC6BQ86SZ2 158 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 PRR15Q8IV56 129 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 OR4C16Q8NGL9 310 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 SCGB3A1Q96QR1 104 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 MRPL32Q9BYC8 188 aaKnown RBP2.06□□□□□ -2.08
HFM1-208ENST00000488023 YIPF3Q9GZM5 350 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 TMEM126AQ9H061 195 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 POPDC3Q9HBV1 291 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 LAMTOR3Q9UHA4 124 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 LAMTOR2Q9Y2Q5 125 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 MROH2AA6NES4 1674 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 LCTP09848 1927 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 DEPDC5O75140 1603 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 ABCA5Q8WWZ7 1642 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 ABCC5O15440 1437 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 ABCA10Q8WWZ4 1543 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 A0A1B0GW64 132 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 EFCAB10A6NFE3 127 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 TMEM212A6NML5 194 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 OVOL1O14753 267 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 CREBL2O60519 120 aaPredicted RBP2.06□□□□□ -2.08
HFM1-208ENST00000488023 CPSF4O95639 269 aaKnown RBP2.06□□□□□ -2.08
HFM1-208ENST00000488023 CD24P25063 80 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 CMPK1P30085 196 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 TMBIM6P55061 237 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 YPEL3P61236 119 aaPredicted RBP2.06□□□□□ -2.08
HFM1-208ENST00000488023 UBE2BP63146 152 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 EIF4EBP1Q13541 118 aaPredicted RBP2.06□□□□□ -2.08
HFM1-208ENST00000488023 C1orf140Q5VVS0 124 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 HMGN2P46Q86SG4 172 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 SIGLECL1Q8N7X8 197 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 Q8NDZ9 215 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 PPTC7Q8NI37 304 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 ISOC1Q96CN7 298 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 GINS4Q9BRT9 223 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 OR2H1Q9GZK4 316 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 TXNL4BQ9NX01 149 aaKnown RBP2.06□□□□□ -2.08
HFM1-208ENST00000488023 NAT8BQ9UHF3 227 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 HSPE1-MOB4S4R3N1 261 aa2.06□□□□□ -2.08
HFM1-208ENST00000488023 RICTORQ6R327 1708 aa2.05□□□□□ -2.08
HFM1-208ENST00000488023 SRCAPQ6ZRS2 3230 aa2.05□□□□□ -2.08
HFM1-208ENST00000488023 SLIT3O75094 1523 aa2.05□□□□□ -2.08
HFM1-208ENST00000488023 ERICH3Q5RHP9 1530 aa2.05□□□□□ -2.08
HFM1-208ENST00000488023 TMEM235A6NFC5 223 aa2.05□□□□□ -2.08
HFM1-208ENST00000488023 C9JAW5 83 aa2.05□□□□□ -2.08
HFM1-208ENST00000488023 GNRH2O43555 120 aa2.05□□□□□ -2.08
HFM1-208ENST00000488023 TNFSF15O95150 251 aa2.05□□□□□ -2.08
HFM1-208ENST00000488023 NAPSAO96009 420 aa2.05□□□□□ -2.08
HFM1-208ENST00000488023 UBBP0CG47 229 aa2.05□□□□□ -2.08
HFM1-208ENST00000488023 COX4I1P13073 169 aa2.05□□□□□ -2.08
HFM1-208ENST00000488023 AMMECR1LQ6DCA0 310 aa2.05□□□□□ -2.08
HFM1-208ENST00000488023 OR2T10Q8NGZ9 312 aa2.05□□□□□ -2.08
HFM1-208ENST00000488023 PFN4Q8NHR9 129 aa2.05□□□□□ -2.08
HFM1-208ENST00000488023 HIST1H2BLQ99880 126 aa2.05□□□□□ -2.08
HFM1-208ENST00000488023 COPZ2Q9P299 210 aa2.05□□□□□ -2.08
HFM1-208ENST00000488023 HIGD1AQ9Y241 93 aa2.05□□□□□ -2.08
HFM1-208ENST00000488023 ATP7AQ04656 1500 aa2.04□□□□□ -2.08
HFM1-208ENST00000488023 ABCA9Q8IUA7 1624 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms