RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 MAP1LC3CQ9BXW4 147 aa10.33□□□□□ -0.76
VPS52-218ENST00000482399 TLN1Q9Y490 2541 aaKnown RBP10.33□□□□□ -0.76
VPS52-218ENST00000482399 ADGRG4Q8IZF6 3080 aa10.33□□□□□ -0.76
VPS52-218ENST00000482399 TM4SF20Q53R12 229 aa10.33□□□□□ -0.76
VPS52-218ENST00000482399 CIARTQ8N365 385 aaPredicted RBP10.33□□□□□ -0.76
VPS52-218ENST00000482399 GRAMD2BQ96HH9 432 aa10.33□□□□□ -0.76
VPS52-218ENST00000482399 TNRC6AQ8NDV7 1962 aaKnown RBP10.33□□□□□ -0.76
VPS52-218ENST00000482399 ATMQ13315 3056 aa10.33□□□□□ -0.76
VPS52-218ENST00000482399 NDUFB8O95169 186 aa10.33□□□□□ -0.76
VPS52-218ENST00000482399 FBLL1A6NHQ2 334 aaKnown RBP10.32□□□□□ -0.76
VPS52-218ENST00000482399 AMMECR1LQ6DCA0 310 aa10.32□□□□□ -0.76
VPS52-218ENST00000482399 CHRDL1Q9BU40 450 aa10.32□□□□□ -0.76
VPS52-218ENST00000482399 COX11Q9Y6N1 276 aa10.32□□□□□ -0.76
VPS52-218ENST00000482399 OR2T8A6NH00 312 aa10.32□□□□□ -0.76
VPS52-218ENST00000482399 PRSS46E5RG02 174 aa10.32□□□□□ -0.76
VPS52-218ENST00000482399 PPIAL4DF5H284 164 aa10.32□□□□□ -0.76
VPS52-218ENST00000482399 GAGE1Q13065 139 aa10.32□□□□□ -0.76
VPS52-218ENST00000482399 UBE2V1Q13404 147 aa10.32□□□□□ -0.76
VPS52-218ENST00000482399 VMA21Q3ZAQ7 101 aa10.32□□□□□ -0.76
VPS52-218ENST00000482399 EXOC3-AS1Q8N2X6 119 aa10.32□□□□□ -0.76
VPS52-218ENST00000482399 PERPQ96FX8 193 aa10.32□□□□□ -0.76
VPS52-218ENST00000482399 NOTCH3Q9UM47 2321 aa10.32□□□□□ -0.76
VPS52-218ENST00000482399 GDF5OSQ5U4N7 250 aa10.32□□□□□ -0.76
VPS52-218ENST00000482399 DEFB124Q8NES8 71 aa10.32□□□□□ -0.76
VPS52-218ENST00000482399 SLC25A2Q9BXI2 301 aa10.32□□□□□ -0.76
VPS52-218ENST00000482399 GAL3ST2Q9H3Q3 398 aa10.32□□□□□ -0.76
VPS52-218ENST00000482399 TPSG1Q9NRR2 321 aa10.32□□□□□ -0.76
VPS52-218ENST00000482399 IGHV3OR16-8A0A075B7F1 116 aa10.31□□□□□ -0.76
VPS52-218ENST00000482399 ZNF891A8MT65 544 aaPredicted RBP10.31□□□□□ -0.76
VPS52-218ENST00000482399 PSG1P11464 419 aa10.31□□□□□ -0.76
VPS52-218ENST00000482399 ZNF714Q96N38 554 aa10.31□□□□□ -0.76
VPS52-218ENST00000482399 FNDC4Q9H6D8 234 aaPredicted RBP10.31□□□□□ -0.76
VPS52-218ENST00000482399 EPDR1Q9UM22 224 aa10.31□□□□□ -0.76
VPS52-218ENST00000482399 SPG11Q96JI7 2443 aa10.31□□□□□ -0.76
VPS52-218ENST00000482399 DSCAMO60469 2012 aa10.31□□□□□ -0.76
VPS52-218ENST00000482399 IGHV3-35A0A0C4DH35 117 aa10.31□□□□□ -0.76
VPS52-218ENST00000482399 TMPRSS3P57727 454 aa10.31□□□□□ -0.76
VPS52-218ENST00000482399 HILPDAQ9Y5L2 63 aa10.31□□□□□ -0.76
VPS52-218ENST00000482399 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.3□□□□□ -0.76
VPS52-218ENST00000482399 F2RL2O00254 374 aa10.3□□□□□ -0.76
VPS52-218ENST00000482399 NDUFB3O43676 98 aa10.3□□□□□ -0.76
VPS52-218ENST00000482399 HES1Q14469 280 aa10.3□□□□□ -0.76
VPS52-218ENST00000482399 DEFB123Q8N688 67 aa10.3□□□□□ -0.76
VPS52-218ENST00000482399 GPR82Q96P67 336 aa10.3□□□□□ -0.76
VPS52-218ENST00000482399 RPP21Q9H633 154 aaKnown RBP10.3□□□□□ -0.76
VPS52-218ENST00000482399 ZNF71Q9NQZ8 489 aaPredicted RBP10.3□□□□□ -0.76
VPS52-218ENST00000482399 MRPL36Q9P0J6 103 aaKnown RBP10.3□□□□□ -0.76
VPS52-218ENST00000482399 LY96Q9Y6Y9 160 aa10.3□□□□□ -0.76
VPS52-218ENST00000482399 SMIM27A0A1W2PRY6 76 aa10.3□□□□□ -0.76
VPS52-218ENST00000482399 FAM90A9PA6NNJ1 464 aa10.3□□□□□ -0.76
VPS52-218ENST00000482399 WT1-ASQ06250 92 aa10.3□□□□□ -0.76
VPS52-218ENST00000482399 TMEM249Q2WGJ8 235 aa10.3□□□□□ -0.76
VPS52-218ENST00000482399 ANKRD39Q53RE8 183 aa10.3□□□□□ -0.76
VPS52-218ENST00000482399 ZNF329Q86UD4 541 aa10.3□□□□□ -0.76
VPS52-218ENST00000482399 ADAMTS20P59510 1910 aa10.3□□□□□ -0.76
VPS52-218ENST00000482399 IGLV2-8P01709 118 aa10.3□□□□□ -0.76
VPS52-218ENST00000482399 TRIP6Q15654 476 aaKnown RBP10.3□□□□□ -0.76
VPS52-218ENST00000482399 OR4C13Q8NGP0 309 aa10.3□□□□□ -0.76
VPS52-218ENST00000482399 F11RQ9Y624 299 aaKnown RBP10.3□□□□□ -0.76
VPS52-218ENST00000482399 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.29□□□□□ -0.768e-10■■■■□ 26.3
VPS52-218ENST00000482399 IGHV1-46P01743 117 aa10.29□□□□□ -0.76
VPS52-218ENST00000482399 GLRXP35754 106 aa10.29□□□□□ -0.76
VPS52-218ENST00000482399 MRPL32Q9BYC8 188 aaKnown RBP10.29□□□□□ -0.76
VPS52-218ENST00000482399 Q9H3A6 140 aa10.29□□□□□ -0.76
VPS52-218ENST00000482399 RPUSD1Q9UJJ7 312 aaKnown RBP10.29□□□□□ -0.76
VPS52-218ENST00000482399 ZNF257Q9Y2Q1 563 aa10.29□□□□□ -0.76
VPS52-218ENST00000482399 APOHP02749 345 aaPredicted RBP10.29□□□□□ -0.76
VPS52-218ENST00000482399 NMUP48645 174 aa10.29□□□□□ -0.76
VPS52-218ENST00000482399 ZADH2Q8N4Q0 377 aa10.29□□□□□ -0.76
VPS52-218ENST00000482399 Q8N976 141 aa10.29□□□□□ -0.76
VPS52-218ENST00000482399 COLQQ9Y215 455 aaPredicted RBP10.29□□□□□ -0.76
VPS52-218ENST00000482399 CT45A10P0DMU9 189 aa10.28□□□□□ -0.76
VPS52-218ENST00000482399 ARF6P62330 175 aa10.28□□□□□ -0.76
VPS52-218ENST00000482399 C2orf83Q53S99 150 aa10.28□□□□□ -0.76
VPS52-218ENST00000482399 VSTM2AQ8TAG5 236 aa10.28□□□□□ -0.76
VPS52-218ENST00000482399 IGFBPL1Q8WX77 278 aa10.28□□□□□ -0.76
VPS52-218ENST00000482399 DDB2Q92466 427 aa10.28□□□□□ -0.76
VPS52-218ENST00000482399 TMUB1Q9BVT8 246 aa10.28□□□□□ -0.76
VPS52-218ENST00000482399 LRRC10Q5BKY1 277 aa10.28□□□□□ -0.76
VPS52-218ENST00000482399 BPIFA4PQ86YQ2 179 aa10.28□□□□□ -0.76
VPS52-218ENST00000482399 C19orf24Q9BVV8 132 aa10.28□□□□□ -0.76
VPS52-218ENST00000482399 CHODLQ9H9P2 273 aa10.28□□□□□ -0.76
VPS52-218ENST00000482399 KALRNO60229 2985 aa10.28□□□□□ -0.76
VPS52-218ENST00000482399 ANKHD1Q8IWZ3 2542 aaKnown RBP10.28□□□□□ -0.76
VPS52-218ENST00000482399 TCRBV4S1A1TA0A5B7 111 aa10.28□□□□□ -0.76
VPS52-218ENST00000482399 SYS1-DBNDD2H3BUS1 97 aa10.28□□□□□ -0.76
VPS52-218ENST00000482399 ESDP10768 282 aa10.28□□□□□ -0.76
VPS52-218ENST00000482399 CD59P13987 128 aa10.28□□□□□ -0.76
VPS52-218ENST00000482399 TNFRSF1AP19438 455 aa10.28□□□□□ -0.76
VPS52-218ENST00000482399 RPL27AP46776 148 aaKnown RBP10.28□□□□□ -0.76
VPS52-218ENST00000482399 TEX45Q8NA69 505 aa10.28□□□□□ -0.76
VPS52-218ENST00000482399 ORAOV1Q8WV07 137 aa10.28□□□□□ -0.76
VPS52-218ENST00000482399 C18orf15Q96N68 181 aa10.28□□□□□ -0.76
VPS52-218ENST00000482399 SLC25A15Q9Y619 301 aa10.28□□□□□ -0.76
VPS52-218ENST00000482399 TACC2O95359 2948 aa10.27□□□□□ -0.76
VPS52-218ENST00000482399 CTRLP40313 264 aa10.27□□□□□ -0.76
VPS52-218ENST00000482399 MBNL2Q5VZF2 373 aaKnown RBP10.27□□□□□ -0.76
VPS52-218ENST00000482399 GAFA1Q96PS6 74 aa10.27□□□□□ -0.76
VPS52-218ENST00000482399 AP5S1Q9NUS5 200 aa10.27□□□□□ -0.76
VPS52-218ENST00000482399 OTOGLQ3ZCN5 2332 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms