RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 DYNLT3P51808 116 aa2□□□□□ -2.09
SMARCA1-204ENST00000478420 ARPP19P56211 112 aa2□□□□□ -2.09
SMARCA1-204ENST00000478420 NCS1P62166 190 aa2□□□□□ -2.09
SMARCA1-204ENST00000478420 EIF5AP63241 154 aaKnown RBP2□□□□□ -2.09
SMARCA1-204ENST00000478420 AKR1C1Q04828 323 aa2□□□□□ -2.09
SMARCA1-204ENST00000478420 ZNF141Q15928 474 aa2□□□□□ -2.09
SMARCA1-204ENST00000478420 MIAQ16674 131 aa2□□□□□ -2.09
SMARCA1-204ENST00000478420 AMMECR1LQ6DCA0 310 aa2□□□□□ -2.09
SMARCA1-204ENST00000478420 TMEM14EPQ6UXP3 125 aa2□□□□□ -2.09
SMARCA1-204ENST00000478420 IDO2Q6ZQW0 420 aa2□□□□□ -2.09
SMARCA1-204ENST00000478420 MIR17HGQ75NE6 70 aa2□□□□□ -2.09
SMARCA1-204ENST00000478420 TRAPPC6BQ86SZ2 158 aa2□□□□□ -2.09
SMARCA1-204ENST00000478420 HIST3H2BBQ8N257 126 aa2□□□□□ -2.09
SMARCA1-204ENST00000478420 C1orf64Q8NEQ6 169 aa2□□□□□ -2.09
SMARCA1-204ENST00000478420 KLF14Q8TD94 323 aaPredicted RBP2□□□□□ -2.09
SMARCA1-204ENST00000478420 ARL11Q969Q4 196 aa2□□□□□ -2.09
SMARCA1-204ENST00000478420 LINC00470Q9BZP3 86 aa2□□□□□ -2.09
SMARCA1-204ENST00000478420 OSTCQ9NRP0 149 aa2□□□□□ -2.09
SMARCA1-204ENST00000478420 CBLN4Q9NTU7 201 aa2□□□□□ -2.09
SMARCA1-204ENST00000478420 MRPL16Q9NX20 251 aaKnown RBP2□□□□□ -2.09
SMARCA1-204ENST00000478420 NAT8Q9UHE5 227 aa2□□□□□ -2.09
SMARCA1-204ENST00000478420 ZNF106Q9H2Y7 1883 aaKnown RBP2□□□□□ -2.09
SMARCA1-204ENST00000478420 A2MP01023 1474 aa2□□□□□ -2.09
SMARCA1-204ENST00000478420 IGHV1-58A0A0C4DH39 117 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 C9orf170A2RU37 121 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 MEIS3P1A6NDR6 274 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 K7ERJ3 54 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 TXNDC9O14530 226 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 UBFD1O14562 309 aaKnown RBP1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 IGHV3-53P01767 116 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 IGKV4-1P06312 121 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 TSPAN19P0C672 248 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 FABP2P12104 132 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 ZNF25P17030 456 aaPredicted RBP1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 XCL1P47992 114 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 RAB5CP51148 216 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 TMBIM6P55061 237 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 RPS25P62851 125 aaKnown RBP1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 EMX2Q04743 252 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 FOXF1Q12946 379 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 BIKQ13323 160 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 TMEM244Q5VVB8 128 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 ZNF660Q6AZW8 331 aaPredicted RBP1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 PHF5AQ7RTV0 110 aaKnown RBP1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 LINC00305Q7Z4B0 112 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 MSRB3Q8IXL7 192 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 TEX29Q8N6K0 151 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 SIGLECL1Q8N7X8 197 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 APCDD1LQ8NCL9 501 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 OR4E2Q8NGC2 313 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 OR10P1Q8NGE3 313 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 PFN4Q8NHR9 129 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 TMEM203Q969S6 136 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 TMEM106AQ96A25 262 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 IMMP2LQ96T52 175 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 HIST1H2BLQ99880 126 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 LXNQ9BS40 222 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 TNFSF18Q9UNG2 199 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 BAIAP2Q9UQB8 552 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 HS3ST2Q9Y278 367 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 HEY1Q9Y5J3 304 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 TOPBP1Q92547 1522 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 PLXND1Q9Y4D7 1925 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 SPATA31E1Q6ZUB1 1445 aa1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 SMG6Q86US8 1419 aaKnown RBP1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 PRG4Q92954 1404 aaPredicted RBP1.99□□□□□ -2.09
SMARCA1-204ENST00000478420 CCNB3Q8WWL7 1395 aa1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 KIF13BQ9NQT8 1826 aa1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 MED1Q15648 1581 aaPredicted RBP1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 DENND4CQ5VZ89 1909 aa1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 A0A1W2PQD3 144 aa1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 C3orf84H3BNL1 204 aa1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 H3BT86 120 aa1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 K7ERU9 68 aa1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 PAEPP09466 180 aa1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 LINC00694P0DN24 101 aa1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 CSRP1P21291 193 aaKnown RBP1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 RPL28P46779 137 aaKnown RBP1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 SUPT4H1P63272 117 aaKnown RBP1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 SELENOWP63302 87 aa1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 HBBP68871 147 aa1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 ZNF117Q03924 483 aa1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 C22orf39Q6P5X5 142 aa1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 HAGHLQ6PII5 290 aaPredicted RBP1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 C4orf22Q6V702 233 aa1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 IFT20Q8IY31 132 aa1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 C3orf56Q8N813 242 aa1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 Q8NAQ8 132 aa1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 Q8NDZ9 215 aa1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 BRK1Q8WUW1 75 aa1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 AP1S3Q96PC3 154 aa1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 SCGB3A1Q96QR1 104 aa1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 MIEN1Q9BRT3 115 aa1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 ADAT1Q9BUB4 502 aaKnown RBP1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 TCEAL2Q9H3H9 227 aaPredicted RBP1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 TAF9BQ9HBM6 251 aa1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 CEP164Q9UPV0 1460 aa1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 SIPA1L1O43166 1804 aa1.98□□□□□ -2.09
SMARCA1-204ENST00000478420 MYH10P35580 1976 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms