RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 A0A1W2PPC4 97 aa11.18□□□□□ -0.62
HDAC1-206ENST00000476391 DUX1O43812 170 aa11.18□□□□□ -0.62
HDAC1-206ENST00000476391 FOXI1Q12951 378 aa11.18□□□□□ -0.62
HDAC1-206ENST00000476391 C1orf122Q6ZSJ8 110 aa11.18□□□□□ -0.62
HDAC1-206ENST00000476391 SYT8Q8NBV8 401 aa11.18□□□□□ -0.62
HDAC1-206ENST00000476391 OR5AN1Q8NGI8 311 aa11.18□□□□□ -0.62
HDAC1-206ENST00000476391 S1PR3Q99500 378 aa11.18□□□□□ -0.62
HDAC1-206ENST00000476391 NHP2Q9NX24 153 aaKnown RBP11.18□□□□□ -0.62
HDAC1-206ENST00000476391 IGHV3-43A0A0B4J1X8 118 aa11.18□□□□□ -0.62
HDAC1-206ENST00000476391 TRBV7-9A0A0J9YWB2 115 aa11.18□□□□□ -0.62
HDAC1-206ENST00000476391 TNFRSF13BO14836 293 aaPredicted RBP11.18□□□□□ -0.62
HDAC1-206ENST00000476391 APOMO95445 188 aa11.18□□□□□ -0.62
HDAC1-206ENST00000476391 IGHV3-43DP0DP04 118 aa11.18□□□□□ -0.62
HDAC1-206ENST00000476391 B3GALT5-AS1P59052 145 aa11.18□□□□□ -0.62
HDAC1-206ENST00000476391 SRYQ05066 204 aa11.18□□□□□ -0.62
HDAC1-206ENST00000476391 SRSF1Q07955 248 aaKnown RBP eCLIP11.18□□□□□ -0.623e-6■□□□□ 10.8
HDAC1-206ENST00000476391 MORN5Q5VZ52 161 aa11.18□□□□□ -0.62
HDAC1-206ENST00000476391 ZNF714Q96N38 554 aa11.18□□□□□ -0.62
HDAC1-206ENST00000476391 CHAC1Q9BUX1 264 aa11.18□□□□□ -0.62
HDAC1-206ENST00000476391 CHD7Q9P2D1 2997 aa11.18□□□□□ -0.62
HDAC1-206ENST00000476391 A0A096LPE4 126 aa11.17□□□□□ -0.62
HDAC1-206ENST00000476391 A0A1W2PPZ6 126 aa11.17□□□□□ -0.62
HDAC1-206ENST00000476391 IGHV3-9P01782 118 aa11.17□□□□□ -0.62
HDAC1-206ENST00000476391 PYYP10082 97 aa11.17□□□□□ -0.62
HDAC1-206ENST00000476391 ACP1P24666 158 aa11.17□□□□□ -0.62
HDAC1-206ENST00000476391 DEFB133Q30KQ1 61 aa11.17□□□□□ -0.62
HDAC1-206ENST00000476391 CEND1Q8N111 149 aa11.17□□□□□ -0.62
HDAC1-206ENST00000476391 COQ2Q96H96 371 aa11.17□□□□□ -0.62
HDAC1-206ENST00000476391 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.17□□□□□ -0.62
HDAC1-206ENST00000476391 VSTM5A8MXK1 200 aa11.17□□□□□ -0.62
HDAC1-206ENST00000476391 DEFB108AA8MXU0 73 aa11.17□□□□□ -0.62
HDAC1-206ENST00000476391 MOSP00540 346 aa11.17□□□□□ -0.62
HDAC1-206ENST00000476391 Q6ZUT4 128 aa11.17□□□□□ -0.62
HDAC1-206ENST00000476391 C8orf46Q8TAG6 207 aa11.17□□□□□ -0.62
HDAC1-206ENST00000476391 FMC1Q96HJ9 113 aa11.17□□□□□ -0.62
HDAC1-206ENST00000476391 ANAPC13Q9BS18 74 aa11.17□□□□□ -0.62
HDAC1-206ENST00000476391 SPINT2O43291 252 aa11.16□□□□□ -0.62
HDAC1-206ENST00000476391 LTAP01374 205 aa11.16□□□□□ -0.62
HDAC1-206ENST00000476391 TCTAP57738 103 aa11.16□□□□□ -0.62
HDAC1-206ENST00000476391 GNG5P63218 68 aa11.16□□□□□ -0.62
HDAC1-206ENST00000476391 PLP2Q04941 152 aa11.16□□□□□ -0.62
HDAC1-206ENST00000476391 SLC25A48Q6ZT89 311 aaKnown RBP11.16□□□□□ -0.62
HDAC1-206ENST00000476391 MOB3BQ86TA1 216 aa11.16□□□□□ -0.62
HDAC1-206ENST00000476391 ITLN1Q8WWA0 313 aa11.16□□□□□ -0.62
HDAC1-206ENST00000476391 FXYD5Q96DB9 178 aa11.16□□□□□ -0.62
HDAC1-206ENST00000476391 C1QTNF4Q9BXJ3 329 aa11.16□□□□□ -0.62
HDAC1-206ENST00000476391 A0A1B0GUT8 65 aa11.16□□□□□ -0.62
HDAC1-206ENST00000476391 A0A1B0GW15 77 aa11.16□□□□□ -0.62
HDAC1-206ENST00000476391 SHISA9B4DS77 424 aa11.16□□□□□ -0.62
HDAC1-206ENST00000476391 MRPL33O75394 65 aaKnown RBP11.16□□□□□ -0.62
HDAC1-206ENST00000476391 MT-ATP8P03928 68 aa11.16□□□□□ -0.62
HDAC1-206ENST00000476391 OR1L4Q8NGR5 311 aa11.16□□□□□ -0.62
HDAC1-206ENST00000476391 OR9G1Q8NH87 305 aa11.16□□□□□ -0.62
HDAC1-206ENST00000476391 B4GALT7Q9UBV7 327 aa11.16□□□□□ -0.62
HDAC1-206ENST00000476391 A0A1B0GWB2 263 aa11.15□□□□□ -0.62
HDAC1-206ENST00000476391 C5orf67F2Z3F1 127 aa11.15□□□□□ -0.62
HDAC1-206ENST00000476391 SLC25A5P05141 298 aaKnown RBP11.15□□□□□ -0.62
HDAC1-206ENST00000476391 RIGQ13278 110 aa11.15□□□□□ -0.62
HDAC1-206ENST00000476391 ZNF766Q5HY98 468 aa11.15□□□□□ -0.62
HDAC1-206ENST00000476391 FAM234AQ9H0X4 552 aa11.15□□□□□ -0.62
HDAC1-206ENST00000476391 ASXL3Q9C0F0 2248 aa11.15□□□□□ -0.62
HDAC1-206ENST00000476391 ZNF503-AS2A6NEH8 195 aa11.15□□□□□ -0.63
HDAC1-206ENST00000476391 LMO7DNF2Z398 122 aa11.15□□□□□ -0.63
HDAC1-206ENST00000476391 HBDP02042 147 aa11.15□□□□□ -0.63
HDAC1-206ENST00000476391 IFI27P40305 119 aaPredicted RBP11.15□□□□□ -0.63
HDAC1-206ENST00000476391 HERV-K104P63124 156 aa11.15□□□□□ -0.63
HDAC1-206ENST00000476391 C2orf83Q53S99 150 aa11.15□□□□□ -0.63
HDAC1-206ENST00000476391 PDPNQ86YL7 162 aa11.15□□□□□ -0.63
HDAC1-206ENST00000476391 IFI27L1Q96BM0 104 aa11.15□□□□□ -0.63
HDAC1-206ENST00000476391 RALYQ9UKM9 306 aaKnown RBP11.15□□□□□ -0.63
HDAC1-206ENST00000476391 DLL1O00548 723 aa11.14□□□□□ -0.63
HDAC1-206ENST00000476391 COX7A2P2O60397 106 aa11.14□□□□□ -0.63
HDAC1-206ENST00000476391 IGLV3-19P01714 112 aa11.14□□□□□ -0.63
HDAC1-206ENST00000476391 OR13A1Q8NGR1 328 aa11.14□□□□□ -0.63
HDAC1-206ENST00000476391 RFESDQ8TAC1 157 aa11.14□□□□□ -0.63
HDAC1-206ENST00000476391 DDB2Q92466 427 aa11.14□□□□□ -0.63
HDAC1-206ENST00000476391 VCX2Q9H322 139 aa11.14□□□□□ -0.63
HDAC1-206ENST00000476391 PRNDQ9UKY0 176 aa11.14□□□□□ -0.63
HDAC1-206ENST00000476391 C15orf65H3BRN8 121 aa11.14□□□□□ -0.63
HDAC1-206ENST00000476391 FAM106CPP0CH98 169 aa11.14□□□□□ -0.63
HDAC1-206ENST00000476391 COL8A1P27658 744 aa11.14□□□□□ -0.63
HDAC1-206ENST00000476391 XGP55808 180 aa11.14□□□□□ -0.63
HDAC1-206ENST00000476391 TAL2Q16559 108 aa11.14□□□□□ -0.63
HDAC1-206ENST00000476391 FAM106AQ4KMX7 169 aa11.14□□□□□ -0.63
HDAC1-206ENST00000476391 C10orf113Q5VZT2 155 aa11.14□□□□□ -0.63
HDAC1-206ENST00000476391 YRDCQ86U90 279 aaKnown RBP11.14□□□□□ -0.63
HDAC1-206ENST00000476391 PRR7Q8TB68 274 aa11.14□□□□□ -0.63
HDAC1-206ENST00000476391 OVOL3O00110 214 aa11.13□□□□□ -0.63
HDAC1-206ENST00000476391 CCL5P13501 91 aa11.13□□□□□ -0.63
HDAC1-206ENST00000476391 PRCDQ00LT1 54 aa11.13□□□□□ -0.63
HDAC1-206ENST00000476391 CD69Q07108 199 aa11.13□□□□□ -0.63
HDAC1-206ENST00000476391 CACNG8Q8WXS5 425 aa11.13□□□□□ -0.63
HDAC1-206ENST00000476391 SGK494Q96LW2 274 aa11.13□□□□□ -0.63
HDAC1-206ENST00000476391 HINT2Q9BX68 163 aa11.13□□□□□ -0.63
HDAC1-206ENST00000476391 FREM1Q5H8C1 2179 aa11.13□□□□□ -0.63
HDAC1-206ENST00000476391 TRBV25-1A0A075B6N4 114 aa11.13□□□□□ -0.63
HDAC1-206ENST00000476391 HLA-DRB4P13762 266 aa11.13□□□□□ -0.63
HDAC1-206ENST00000476391 LOXL1Q08397 574 aaPredicted RBP11.13□□□□□ -0.63
HDAC1-206ENST00000476391 AMTNQ6UX39 209 aa11.13□□□□□ -0.63
HDAC1-206ENST00000476391 IFI27L2Q9H2X8 130 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms