RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 HEYLQ9NQ87 328 aaPredicted RBP10.54□□□□□ -0.72
CCNL1-216ENST00000475298 TMEM140Q9NV12 185 aa10.54□□□□□ -0.72
CCNL1-216ENST00000475298 ACACAQ13085 2346 aa10.54□□□□□ -0.72
CCNL1-216ENST00000475298 TANC2Q9HCD6 1990 aa10.54□□□□□ -0.72
CCNL1-216ENST00000475298 IGHV1-24A0A0C4DH33 117 aa10.54□□□□□ -0.72
CCNL1-216ENST00000475298 SMIM17P0DL12 118 aa10.54□□□□□ -0.72
CCNL1-216ENST00000475298 MGST1P10620 155 aaKnown RBP10.54□□□□□ -0.72
CCNL1-216ENST00000475298 MYOD1P15172 320 aa10.54□□□□□ -0.72
CCNL1-216ENST00000475298 CR1LQ2VPA4 569 aa10.54□□□□□ -0.72
CCNL1-216ENST00000475298 TIGITQ495A1 244 aa10.54□□□□□ -0.72
CCNL1-216ENST00000475298 SSMEM1Q8WWF3 244 aa10.54□□□□□ -0.72
CCNL1-216ENST00000475298 SSBP4Q9BWG4 385 aaPredicted RBP10.54□□□□□ -0.72
CCNL1-216ENST00000475298 SSBP3Q9BWW4 388 aaPredicted RBP10.54□□□□□ -0.72
CCNL1-216ENST00000475298 GCM1Q9NP62 436 aa10.54□□□□□ -0.72
CCNL1-216ENST00000475298 SERTAD4Q9NUC0 356 aa10.54□□□□□ -0.72
CCNL1-216ENST00000475298 ZNRD1Q9P1U0 126 aa10.54□□□□□ -0.72
CCNL1-216ENST00000475298 IGLV3-9A0A075B6K5 115 aa10.53□□□□□ -0.72
CCNL1-216ENST00000475298 PRSS46E5RG02 174 aa10.53□□□□□ -0.72
CCNL1-216ENST00000475298 H3BRM9 83 aa10.53□□□□□ -0.72
CCNL1-216ENST00000475298 H3BUT2 72 aa10.53□□□□□ -0.72
CCNL1-216ENST00000475298 KLK10O43240 276 aa10.53□□□□□ -0.72
CCNL1-216ENST00000475298 IGHV1-46P01743 117 aa10.53□□□□□ -0.72
CCNL1-216ENST00000475298 SAA2P0DJI9 122 aaPredicted RBP10.53□□□□□ -0.72
CCNL1-216ENST00000475298 CGB3P0DN86 165 aa10.53□□□□□ -0.72
CCNL1-216ENST00000475298 CGB7P0DN87 165 aa10.53□□□□□ -0.72
CCNL1-216ENST00000475298 HTR1DP28221 377 aa10.53□□□□□ -0.72
CCNL1-216ENST00000475298 PPOXP50336 477 aa10.53□□□□□ -0.72
CCNL1-216ENST00000475298 SCGB2A2Q13296 93 aa10.53□□□□□ -0.72
CCNL1-216ENST00000475298 RAB31Q13636 194 aa10.53□□□□□ -0.72
CCNL1-216ENST00000475298 TMEM97Q5BJF2 176 aa10.53□□□□□ -0.72
CCNL1-216ENST00000475298 FAM216BQ8N7L0 139 aa10.53□□□□□ -0.72
CCNL1-216ENST00000475298 IGF2BP2-AS1Q96M15 143 aa10.53□□□□□ -0.72
CCNL1-216ENST00000475298 CCL13Q99616 98 aa10.53□□□□□ -0.72
CCNL1-216ENST00000475298 ZGRF1Q86YA3 2104 aa10.53□□□□□ -0.72
CCNL1-216ENST00000475298 VDAC2P45880 294 aaPredicted RBP10.53□□□□□ -0.72
CCNL1-216ENST00000475298 UQCRFS1P47985 274 aa10.53□□□□□ -0.72
CCNL1-216ENST00000475298 MFAP2P55001 183 aa10.53□□□□□ -0.72
CCNL1-216ENST00000475298 ERVK-16P61578 105 aa10.53□□□□□ -0.72
CCNL1-216ENST00000475298 TNFAIP6P98066 277 aaPredicted RBP10.53□□□□□ -0.72
CCNL1-216ENST00000475298 PRR31Q5SQ13 230 aa10.53□□□□□ -0.72
CCNL1-216ENST00000475298 ZCCHC24Q8N2G6 241 aaKnown RBP10.53□□□□□ -0.72
CCNL1-216ENST00000475298 OR52E5Q8NH55 327 aa10.53□□□□□ -0.72
CCNL1-216ENST00000475298 DDB2Q92466 427 aa10.53□□□□□ -0.72
CCNL1-216ENST00000475298 MS4A6AQ9H2W1 248 aa10.53□□□□□ -0.72
CCNL1-216ENST00000475298 THYN1Q9P016 225 aa10.53□□□□□ -0.72
CCNL1-216ENST00000475298 GFRA3O60609 400 aa10.52□□□□□ -0.73
CCNL1-216ENST00000475298 COX8AP10176 69 aa10.52□□□□□ -0.73
CCNL1-216ENST00000475298 PLP1P60201 277 aa10.52□□□□□ -0.73
CCNL1-216ENST00000475298 OR2K2Q8NGT1 345 aa10.52□□□□□ -0.73
CCNL1-216ENST00000475298 MBD6Q96DN6 1003 aa10.52□□□□□ -0.73
CCNL1-216ENST00000475298 SIGMAR1Q99720 223 aa10.52□□□□□ -0.73
CCNL1-216ENST00000475298 TMEM191AQ9H0A3 160 aa10.52□□□□□ -0.73
CCNL1-216ENST00000475298 DYSFO75923 2080 aa10.52□□□□□ -0.73
CCNL1-216ENST00000475298 SNAI2O43623 268 aa10.52□□□□□ -0.73
CCNL1-216ENST00000475298 STPG3Q8N7X2 389 aa10.52□□□□□ -0.73
CCNL1-216ENST00000475298 NUP35Q8NFH5 326 aa10.52□□□□□ -0.73
CCNL1-216ENST00000475298 OR10W1Q8NGF6 305 aa10.52□□□□□ -0.73
CCNL1-216ENST00000475298 RNF7Q9UBF6 113 aa10.52□□□□□ -0.73
CCNL1-216ENST00000475298 TCF19Q9Y242 345 aa10.52□□□□□ -0.73
CCNL1-216ENST00000475298 LSM4Q9Y4Z0 139 aaKnown RBP10.52□□□□□ -0.73
CCNL1-216ENST00000475298 TNCP24821 2201 aa10.51□□□□□ -0.73
CCNL1-216ENST00000475298 KBTBD11-OT1A0A1B0GTJ5 212 aa10.51□□□□□ -0.73
CCNL1-216ENST00000475298 LEPROTL1O95214 131 aa10.51□□□□□ -0.73
CCNL1-216ENST00000475298 RAB9AP51151 201 aa10.51□□□□□ -0.73
CCNL1-216ENST00000475298 MEF2CQ06413 473 aaPredicted RBP10.51□□□□□ -0.73
CCNL1-216ENST00000475298 TCF15Q12870 199 aa10.51□□□□□ -0.73
CCNL1-216ENST00000475298 OR10AG1Q8NH19 301 aa10.51□□□□□ -0.73
CCNL1-216ENST00000475298 GAFA1Q96PS6 74 aa10.51□□□□□ -0.73
CCNL1-216ENST00000475298 JKAMPQ9P055 326 aa10.51□□□□□ -0.73
CCNL1-216ENST00000475298 PKDREJQ9NTG1 2253 aa10.51□□□□□ -0.73
CCNL1-216ENST00000475298 TEX48A0A1B0GUV7 120 aa10.51□□□□□ -0.73
CCNL1-216ENST00000475298 CD40P25942 277 aa10.51□□□□□ -0.73
CCNL1-216ENST00000475298 CEACAM3P40198 252 aa10.51□□□□□ -0.73
CCNL1-216ENST00000475298 TMPRSS3P57727 454 aa10.51□□□□□ -0.73
CCNL1-216ENST00000475298 CCL8P80075 99 aa10.51□□□□□ -0.73
CCNL1-216ENST00000475298 FAM222BQ8WU58 562 aa10.51□□□□□ -0.73
CCNL1-216ENST00000475298 APC2O95996 2303 aa10.5□□□□□ -0.73
CCNL1-216ENST00000475298 A0A0G2JLM5 398 aa10.5□□□□□ -0.73
CCNL1-216ENST00000475298 VWC2LB2RUY7 222 aa10.5□□□□□ -0.73
CCNL1-216ENST00000475298 GGTLC3B5MD39 225 aa10.5□□□□□ -0.73
CCNL1-216ENST00000475298 HIST1H1EP10412 219 aaKnown RBP10.5□□□□□ -0.73
CCNL1-216ENST00000475298 GATA4P43694 442 aa10.5□□□□□ -0.73
CCNL1-216ENST00000475298 HSD52Q0P140 79 aa10.5□□□□□ -0.73
CCNL1-216ENST00000475298 MIR17HGQ75NE6 70 aa10.5□□□□□ -0.73
CCNL1-216ENST00000475298 BPIFA4PQ86YQ2 179 aa10.5□□□□□ -0.73
CCNL1-216ENST00000475298 NHLRC2Q8NBF2 726 aa10.5□□□□□ -0.73
CCNL1-216ENST00000475298 PERPQ96FX8 193 aa10.5□□□□□ -0.73
CCNL1-216ENST00000475298 AP1S3Q96PC3 154 aa10.5□□□□□ -0.73
CCNL1-216ENST00000475298 TRAV26-1A0A087WT03 109 aa10.5□□□□□ -0.73
CCNL1-216ENST00000475298 PSMB11A5LHX3 300 aa10.5□□□□□ -0.73
CCNL1-216ENST00000475298 H1FXQ92522 213 aaKnown RBP10.5□□□□□ -0.73
CCNL1-216ENST00000475298 PMCHL2Q9BQD1 86 aa10.5□□□□□ -0.73
CCNL1-216ENST00000475298 HINT2Q9BX68 163 aa10.5□□□□□ -0.73
CCNL1-216ENST00000475298 ZNF355PQ9NSJ1 428 aa10.5□□□□□ -0.73
CCNL1-216ENST00000475298 MUC6Q6W4X9 2439 aa10.49□□□□□ -0.73
CCNL1-216ENST00000475298 FAM90A9PA6NNJ1 464 aa10.49□□□□□ -0.73
CCNL1-216ENST00000475298 C15orf61A6NNL5 157 aa10.49□□□□□ -0.73
CCNL1-216ENST00000475298 APOA2P02652 100 aa10.49□□□□□ -0.73
CCNL1-216ENST00000475298 FGF6P10767 208 aa10.49□□□□□ -0.73
CCNL1-216ENST00000475298 CRYBA4P53673 196 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms