RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 ABCA13Q86UQ4 5058 aa2.77□□□□□ -1.97
SORT1-202ENST00000466471 PHF3Q92576 2039 aaKnown RBP2.76□□□□□ -1.97
SORT1-202ENST00000466471 DNAJC13O75165 2243 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 PPIAL4CA0A0B4J2A2 164 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 IGKV1D-13A0A0B4J2D9 117 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 ZNF816-ZNF321PA0A0X1KG74 233 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 SMIM27A0A1W2PRY6 76 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 A0A1W2PS18 150 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 C5orf63A6NC05 138 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 DPRXA6NFQ7 191 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 ZNF705FA8MVS1 300 aaPredicted RBP2.76□□□□□ -1.97
SORT1-202ENST00000466471 TMEM238C9JI98 176 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 FCN1O00602 326 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 ISLRO14498 428 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 RAB29O14966 203 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 RBFOX2O43251 390 aaKnown RBP eCLIP2.76□□□□□ -1.97
SORT1-202ENST00000466471 CD5LO43866 347 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 ZNF324O75467 553 aaPredicted RBP2.76□□□□□ -1.97
SORT1-202ENST00000466471 SERF1AO75920 110 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 IGKV1-5P01602 117 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 IGHV4-39P01824 125 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 HLA-DQA1P01909 254 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 ZNF705DP0CH99 300 aaPredicted RBP2.76□□□□□ -1.97
SORT1-202ENST00000466471 ZNF705BP0CI00 300 aaPredicted RBP2.76□□□□□ -1.97
SORT1-202ENST00000466471 PPIAL4GP0DN37 164 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 IGKV1-13P0DP09 117 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 PVRP15151 417 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 OPRM1P35372 400 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 OPRK1P41145 380 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 CAPZBP47756 277 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 RPL24P83731 157 aaKnown RBP2.76□□□□□ -1.97
SORT1-202ENST00000466471 PLCXD2Q0VAA5 305 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 C1orf61Q13536 156 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 MMDQ15546 238 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 HLA-DRB5Q30154 266 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 ZNF718Q3SXZ3 478 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 PSMG4Q5JS54 123 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 TSPO2Q5TGU0 170 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 FAM78BQ5VT40 261 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 PRAMEF20Q5VT98 475 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 C9orf135Q5VTT2 229 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 RAET1LQ5VY80 246 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 MORN5Q5VZ52 161 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 UFSP1Q6NVU6 142 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 MRPL54Q6P161 138 aaKnown RBP2.76□□□□□ -1.97
SORT1-202ENST00000466471 TMEM136Q6ZRR5 245 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 FAM231DQ6ZW35 169 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 MOB1BQ7L9L4 216 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 SPATA12Q7Z6I5 190 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 LRP11Q86VZ4 500 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 PRSS58Q8IYP2 241 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 ZADH2Q8N4Q0 377 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 SIGLECL1Q8N7X8 197 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 MAPKAPK5-AS1Q8N8E1 139 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 GATSQ8NAP1 163 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 OR2M3Q8NG83 312 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 OR8B3Q8NGG8 313 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 OR5A2Q8NGI9 324 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 CCL4L1Q8NHW4 92 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 SLC37A2Q8TED4 501 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 CT55Q8WUE5 264 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 RPUSD4Q96CM3 377 aaKnown RBP2.76□□□□□ -1.97
SORT1-202ENST00000466471 STARD4Q96DR4 205 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 KCNS1Q96KK3 526 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 FOXN4Q96NZ1 517 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 OR8B2Q96RD0 313 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 HSPB9Q9BQS6 159 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 DCTN5Q9BTE1 182 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 RSG1Q9BU20 258 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 QTRT1Q9BXR0 403 aaKnown RBP2.76□□□□□ -1.97
SORT1-202ENST00000466471 MS4A6AQ9H2W1 248 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 CST9LQ9H4G1 147 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 PATZ1Q9HBE1 687 aaKnown RBP2.76□□□□□ -1.97
SORT1-202ENST00000466471 ZNF160Q9HCG1 818 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 NRN1Q9NPD7 142 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 MED29Q9NX70 200 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 PSENENQ9NZ42 101 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 KCNIP1Q9NZI2 227 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 PIGLQ9Y2B2 252 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 V9GYV3 84 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 CSMD3Q7Z407 3707 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 MED12Q93074 2177 aa2.76□□□□□ -1.97
SORT1-202ENST00000466471 NINQ8N4C6 2090 aa2.75□□□□□ -1.97
SORT1-202ENST00000466471 FRAS1Q86XX4 4008 aa2.75□□□□□ -1.97
SORT1-202ENST00000466471 TRBV20OR9-2A0A075B6H5 130 aa2.75□□□□□ -1.97
SORT1-202ENST00000466471 A0A1W2PRS3 328 aa2.75□□□□□ -1.97
SORT1-202ENST00000466471 C2orf70A6NJV1 201 aa2.75□□□□□ -1.97
SORT1-202ENST00000466471 LRRC30A6NM36 301 aa2.75□□□□□ -1.97
SORT1-202ENST00000466471 C11orf94C9JXX5 98 aa2.75□□□□□ -1.97
SORT1-202ENST00000466471 K7ERU9 68 aa2.75□□□□□ -1.97
SORT1-202ENST00000466471 CORTO00230 105 aa2.75□□□□□ -1.97
SORT1-202ENST00000466471 BMPR1BO00238 502 aa2.75□□□□□ -1.97
SORT1-202ENST00000466471 TAX1BP3O14907 124 aa2.75□□□□□ -1.97
SORT1-202ENST00000466471 ATP6V0E1O15342 81 aa2.75□□□□□ -1.97
SORT1-202ENST00000466471 SERPINE2P07093 398 aa2.75□□□□□ -1.97
SORT1-202ENST00000466471 SCTP09683 121 aa2.75□□□□□ -1.97
SORT1-202ENST00000466471 OR5AL1P0C617 328 aa2.75□□□□□ -1.97
SORT1-202ENST00000466471 C3orf79P0CE67 100 aa2.75□□□□□ -1.97
SORT1-202ENST00000466471 IGLC1P0CG04 106 aa2.75□□□□□ -1.97
SORT1-202ENST00000466471 B4GALT1P15291 398 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms