RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 SMIM17P0DL12 118 aa0.78□□□□□ -2.28
SMC4-205ENST00000465563 TSNQ15631 228 aaKnown RBP0.78□□□□□ -2.28
SMC4-205ENST00000465563 OR11H6Q8NGC7 330 aa0.78□□□□□ -2.28
SMC4-205ENST00000465563 OR8D4Q8NGM9 314 aa0.78□□□□□ -2.28
SMC4-205ENST00000465563 SIGMAR1Q99720 223 aa0.78□□□□□ -2.28
SMC4-205ENST00000465563 RIMBP3CA6NJZ7 1639 aa0.78□□□□□ -2.29
SMC4-205ENST00000465563 RIMBP3BA6NNM3 1639 aa0.78□□□□□ -2.29
SMC4-205ENST00000465563 RIMBP3Q9UFD9 1639 aa0.78□□□□□ -2.29
SMC4-205ENST00000465563 TRAV3A0A0B4J244 114 aa0.77□□□□□ -2.29
SMC4-205ENST00000465563 C7orf71A4D174 169 aa0.77□□□□□ -2.29
SMC4-205ENST00000465563 HYPMO75409 117 aa0.77□□□□□ -2.29
SMC4-205ENST00000465563 IFNA6P05013 189 aa0.77□□□□□ -2.29
SMC4-205ENST00000465563 MGST1P10620 155 aaKnown RBP0.77□□□□□ -2.29
SMC4-205ENST00000465563 HOXA6P31267 233 aa0.77□□□□□ -2.29
SMC4-205ENST00000465563 ZNF93P35789 620 aaPredicted RBP0.77□□□□□ -2.29
SMC4-205ENST00000465563 PRB3Q04118 309 aaPredicted RBP0.77□□□□□ -2.29
SMC4-205ENST00000465563 C1orf137Q5JT78 98 aa0.77□□□□□ -2.29
SMC4-205ENST00000465563 SFT2D1Q8WV19 159 aa0.77□□□□□ -2.29
SMC4-205ENST00000465563 OBSCN-AS1Q96MR7 158 aa0.77□□□□□ -2.29
SMC4-205ENST00000465563 HIST1H2BLQ99880 126 aa0.77□□□□□ -2.29
SMC4-205ENST00000465563 NHP2Q9NX24 153 aaKnown RBP0.77□□□□□ -2.29
SMC4-205ENST00000465563 ADGRL3Q9HAR2 1447 aa0.77□□□□□ -2.29
SMC4-205ENST00000465563 CAMSAP1Q5T5Y3 1602 aa0.77□□□□□ -2.29
SMC4-205ENST00000465563 LAMA4Q16363 1823 aa0.77□□□□□ -2.29
SMC4-205ENST00000465563 MUC5BQ9HC84 5762 aaPredicted RBP0.77□□□□□ -2.29
SMC4-205ENST00000465563 ASCC3Q8N3C0 2202 aaKnown RBP0.77□□□□□ -2.29
SMC4-205ENST00000465563 ZFC3H1O60293 1989 aaKnown RBP0.76□□□□□ -2.29
SMC4-205ENST00000465563 LAMB4A4D0S4 1761 aa0.76□□□□□ -2.29
SMC4-205ENST00000465563 TMEM210A6NLX4 147 aa0.76□□□□□ -2.29
SMC4-205ENST00000465563 DEFA3P59666 94 aa0.76□□□□□ -2.29
SMC4-205ENST00000465563 ESRGQ1W209 222 aa0.76□□□□□ -2.29
SMC4-205ENST00000465563 AKIRIN2Q53H80 203 aa0.76□□□□□ -2.29
SMC4-205ENST00000465563 BRMS1LQ5PSV4 323 aa0.76□□□□□ -2.29
SMC4-205ENST00000465563 Q8IYB0 196 aa0.76□□□□□ -2.29
SMC4-205ENST00000465563 LINC00526Q96FQ7 95 aa0.76□□□□□ -2.29
SMC4-205ENST00000465563 SLC35A3Q9Y2D2 325 aa0.76□□□□□ -2.29
SMC4-205ENST00000465563 ZFP30Q9Y2G7 519 aa0.76□□□□□ -2.29
SMC4-205ENST00000465563 MED12Q93074 2177 aa0.76□□□□□ -2.29
SMC4-205ENST00000465563 FMN1Q68DA7 1419 aa0.75□□□□□ -2.29
SMC4-205ENST00000465563 TRBV6-8A0A0A6YYG3 113 aa0.75□□□□□ -2.29
SMC4-205ENST00000465563 C1orf196B1AJZ1 125 aa0.75□□□□□ -2.29
SMC4-205ENST00000465563 J3QRK9 145 aa0.75□□□□□ -2.29
SMC4-205ENST00000465563 INE1O15225 51 aa0.75□□□□□ -2.29
SMC4-205ENST00000465563 SULT1B1O43704 296 aa0.75□□□□□ -2.29
SMC4-205ENST00000465563 C1QBP02746 253 aa0.75□□□□□ -2.29
SMC4-205ENST00000465563 PRB4P10163 310 aaPredicted RBP0.75□□□□□ -2.29
SMC4-205ENST00000465563 CAPZBP47756 277 aa0.75□□□□□ -2.29
SMC4-205ENST00000465563 SERPINB9P50453 376 aa0.75□□□□□ -2.29
SMC4-205ENST00000465563 TMEM126AQ9H061 195 aa0.75□□□□□ -2.29
SMC4-205ENST00000465563 NMNAT1Q9HAN9 279 aaPredicted RBP0.75□□□□□ -2.29
SMC4-205ENST00000465563 KLK9Q9UKQ9 250 aa0.75□□□□□ -2.29
SMC4-205ENST00000465563 UTP11Q9Y3A2 253 aaKnown RBP0.75□□□□□ -2.29
SMC4-205ENST00000465563 CHCHD2Q9Y6H1 151 aaPredicted RBP0.75□□□□□ -2.29
SMC4-205ENST00000465563 MYH3P11055 1940 aa0.75□□□□□ -2.29
SMC4-205ENST00000465563 NUP98P52948 1817 aa0.75□□□□□ -2.29
SMC4-205ENST00000465563 CNTRLQ7Z7A1 2325 aa0.75□□□□□ -2.29
SMC4-205ENST00000465563 FREM3P0C091 2139 aa0.74□□□□□ -2.29
SMC4-205ENST00000465563 PTPRFP10586 1907 aa0.74□□□□□ -2.29
SMC4-205ENST00000465563 NUP210LQ5VU65 1888 aa0.74□□□□□ -2.29
SMC4-205ENST00000465563 TRBV19A0A075B6N1 114 aa0.74□□□□□ -2.29
SMC4-205ENST00000465563 TRBV6-7A0A0A0MS04 114 aa0.74□□□□□ -2.29
SMC4-205ENST00000465563 CLDN25C9JDP6 229 aa0.74□□□□□ -2.29
SMC4-205ENST00000465563 CYB5BO43169 146 aa0.74□□□□□ -2.29
SMC4-205ENST00000465563 ATP5G3P48201 142 aa0.74□□□□□ -2.29
SMC4-205ENST00000465563 PIGPP57054 158 aa0.74□□□□□ -2.29
SMC4-205ENST00000465563 RRN3P1Q2M238 152 aa0.74□□□□□ -2.29
SMC4-205ENST00000465563 DEFB115Q30KQ5 88 aa0.74□□□□□ -2.29
SMC4-205ENST00000465563 LIN52Q52LA3 116 aa0.74□□□□□ -2.29
SMC4-205ENST00000465563 Q8N814 137 aa0.74□□□□□ -2.29
SMC4-205ENST00000465563 STAG3L4Q8TBR4 150 aa0.74□□□□□ -2.29
SMC4-205ENST00000465563 GNPDA2Q8TDQ7 276 aa0.74□□□□□ -2.29
SMC4-205ENST00000465563 ITFG2Q969R8 447 aa0.74□□□□□ -2.29
SMC4-205ENST00000465563 SLAMF6Q96DU3 332 aa0.74□□□□□ -2.29
SMC4-205ENST00000465563 KIFC1Q9BW19 673 aa0.74□□□□□ -2.29
SMC4-205ENST00000465563 BCL2L10Q9HD36 194 aa0.74□□□□□ -2.29
SMC4-205ENST00000465563 PROSCO94903 275 aa0.73□□□□□ -2.29
SMC4-205ENST00000465563 HSD11B1P28845 292 aa0.73□□□□□ -2.29
SMC4-205ENST00000465563 ERP29P30040 261 aaKnown RBP0.73□□□□□ -2.29
SMC4-205ENST00000465563 DYNLT1P63172 113 aa0.73□□□□□ -2.29
SMC4-205ENST00000465563 REEP5Q00765 189 aa0.73□□□□□ -2.29
SMC4-205ENST00000465563 FAM172AQ8WUF8 416 aa0.73□□□□□ -2.29
SMC4-205ENST00000465563 BTF3L4Q96K17 158 aa0.73□□□□□ -2.29
SMC4-205ENST00000465563 MRPL57Q9BQC6 102 aaKnown RBP0.73□□□□□ -2.29
SMC4-205ENST00000465563 PRADC1Q9BSG0 188 aa0.73□□□□□ -2.29
SMC4-205ENST00000465563 MYO5AQ9Y4I1 1855 aaKnown RBP0.73□□□□□ -2.29
SMC4-205ENST00000465563 ZNF469Q96JG9 3925 aaPredicted RBP0.72□□□□□ -2.29
SMC4-205ENST00000465563 ZNF736B4DX44 427 aaPredicted RBP0.72□□□□□ -2.29
SMC4-205ENST00000465563 SPA17Q15506 151 aa0.72□□□□□ -2.29
SMC4-205ENST00000465563 GOLT1AQ6ZVE7 132 aa0.72□□□□□ -2.29
SMC4-205ENST00000465563 OR10X1Q8NGY0 326 aa0.72□□□□□ -2.29
SMC4-205ENST00000465563 OR2T10Q8NGZ9 312 aa0.72□□□□□ -2.29
SMC4-205ENST00000465563 DGCR14Q96DF8 476 aaKnown RBP0.72□□□□□ -2.29
SMC4-205ENST00000465563 C14orf132Q9NPU4 83 aa0.72□□□□□ -2.29
SMC4-205ENST00000465563 MYLKQ15746 1914 aa0.72□□□□□ -2.29
SMC4-205ENST00000465563 SIP14410 1827 aa0.71□□□□□ -2.3
SMC4-205ENST00000465563 ANP32AP39687 249 aaKnown RBP0.71□□□□□ -2.3
SMC4-205ENST00000465563 HSPE1P61604 102 aaKnown RBP0.71□□□□□ -2.3
SMC4-205ENST00000465563 EIF5AP63241 154 aaKnown RBP0.71□□□□□ -2.3
SMC4-205ENST00000465563 GDF5OSQ5U4N7 250 aa0.71□□□□□ -2.3
SMC4-205ENST00000465563 LYRM7Q5U5X0 104 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms