RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 ODF3L2Q3SX64 289 aa11.81□□□□□ -0.52
ERCC3-206ENST00000462306 CITED4Q96RK1 184 aa11.81□□□□□ -0.52
ERCC3-206ENST00000462306 TRGV9Q99603 122 aa11.81□□□□□ -0.52
ERCC3-206ENST00000462306 TM2D3Q9BRN9 247 aa11.81□□□□□ -0.52
ERCC3-206ENST00000462306 TMEM231Q9H6L2 316 aa11.81□□□□□ -0.52
ERCC3-206ENST00000462306 GPN1Q9HCN4 374 aaPredicted RBP11.81□□□□□ -0.52
ERCC3-206ENST00000462306 U3KQK5 164 aa11.81□□□□□ -0.52
ERCC3-206ENST00000462306 HUWE1Q7Z6Z7 4374 aaKnown RBP11.81□□□□□ -0.52
ERCC3-206ENST00000462306 IGKV3-7A0A075B6H7 116 aa11.8□□□□□ -0.52
ERCC3-206ENST00000462306 A0A1W2PS18 150 aa11.8□□□□□ -0.52
ERCC3-206ENST00000462306 SNRPGP15A8MWD9 76 aa11.8□□□□□ -0.52
ERCC3-206ENST00000462306 PRAF2O60831 178 aa11.8□□□□□ -0.52
ERCC3-206ENST00000462306 TSC22D2O75157 780 aa11.8□□□□□ -0.52
ERCC3-206ENST00000462306 HNRNPCP07910 306 aaKnown RBP eCLIP11.8□□□□□ -0.52
ERCC3-206ENST00000462306 GSG1LQ6UXU4 331 aa11.8□□□□□ -0.52
ERCC3-206ENST00000462306 ACOT7LQ6ZUV0 252 aa11.8□□□□□ -0.52
ERCC3-206ENST00000462306 OR51G1Q8NGK1 321 aa11.8□□□□□ -0.52
ERCC3-206ENST00000462306 C11orf1Q9H5F2 150 aa11.8□□□□□ -0.52
ERCC3-206ENST00000462306 UBQLN2Q9UHD9 624 aa11.8□□□□□ -0.52
ERCC3-206ENST00000462306 K7EPK0 472 aa11.79□□□□□ -0.52
ERCC3-206ENST00000462306 METTL15P1P0C7V9 234 aa11.79□□□□□ -0.52
ERCC3-206ENST00000462306 P2RY1P47900 373 aa11.79□□□□□ -0.52
ERCC3-206ENST00000462306 TFPI2P48307 235 aa11.79□□□□□ -0.52
ERCC3-206ENST00000462306 OR8G2PQ6IF36 304 aa11.79□□□□□ -0.52
ERCC3-206ENST00000462306 GBGT1Q8N5D6 347 aa11.79□□□□□ -0.52
ERCC3-206ENST00000462306 RNF125Q96EQ8 232 aa11.79□□□□□ -0.52
ERCC3-206ENST00000462306 NARS2Q96I59 477 aaKnown RBP11.79□□□□□ -0.52
ERCC3-206ENST00000462306 FAM110AQ9BQ89 295 aa11.79□□□□□ -0.52
ERCC3-206ENST00000462306 FABP1P07148 127 aa11.78□□□□□ -0.52
ERCC3-206ENST00000462306 C16orf54Q6UWD8 224 aa11.78□□□□□ -0.52
ERCC3-206ENST00000462306 GLMPQ8WWB7 406 aa11.78□□□□□ -0.52
ERCC3-206ENST00000462306 MS4A6AQ9H2W1 248 aa11.78□□□□□ -0.52
ERCC3-206ENST00000462306 LSM5Q9Y4Y9 91 aaKnown RBP11.78□□□□□ -0.52
ERCC3-206ENST00000462306 STAB2Q8WWQ8 2551 aa11.78□□□□□ -0.52
ERCC3-206ENST00000462306 TENM3Q9P273 2699 aa11.77□□□□□ -0.52
ERCC3-206ENST00000462306 TRAV2A0A0B4J234 112 aa11.77□□□□□ -0.53
ERCC3-206ENST00000462306 BUB3O43684 328 aa11.77□□□□□ -0.53
ERCC3-206ENST00000462306 PAFAH1B2P68402 229 aa11.77□□□□□ -0.53
ERCC3-206ENST00000462306 DLK1P80370 383 aa11.77□□□□□ -0.53
ERCC3-206ENST00000462306 AKR1C1Q04828 323 aa11.77□□□□□ -0.53
ERCC3-206ENST00000462306 ARL16Q0P5N6 197 aa11.77□□□□□ -0.53
ERCC3-206ENST00000462306 OR2F1Q13607 317 aa11.77□□□□□ -0.53
ERCC3-206ENST00000462306 TMEM144Q7Z5S9 345 aa11.77□□□□□ -0.53
ERCC3-206ENST00000462306 GRAMD2BQ96HH9 432 aa11.77□□□□□ -0.53
ERCC3-206ENST00000462306 RCHY1Q96PM5 261 aa11.77□□□□□ -0.53
ERCC3-206ENST00000462306 ZMAT4Q9H898 229 aa11.77□□□□□ -0.53
ERCC3-206ENST00000462306 RABAC1Q9UI14 185 aa11.77□□□□□ -0.53
ERCC3-206ENST00000462306 FNDC10F2Z333 226 aa11.76□□□□□ -0.53
ERCC3-206ENST00000462306 L7N2F9 121 aa11.76□□□□□ -0.53
ERCC3-206ENST00000462306 SIX6O95475 246 aa11.76□□□□□ -0.53
ERCC3-206ENST00000462306 EIF2B2P49770 351 aaKnown RBP11.76□□□□□ -0.53
ERCC3-206ENST00000462306 RPL11P62913 178 aaKnown RBP11.76□□□□□ -0.53
ERCC3-206ENST00000462306 VAMP2P63027 116 aa11.76□□□□□ -0.53
ERCC3-206ENST00000462306 RAB32Q13637 225 aa11.76□□□□□ -0.53
ERCC3-206ENST00000462306 TMEM182Q6ZP80 229 aaPredicted RBP11.76□□□□□ -0.53
ERCC3-206ENST00000462306 WFDC3Q8IUB2 231 aa11.76□□□□□ -0.53
ERCC3-206ENST00000462306 STPG3Q8N7X2 389 aa11.76□□□□□ -0.53
ERCC3-206ENST00000462306 OR10P1Q8NGE3 313 aa11.76□□□□□ -0.53
ERCC3-206ENST00000462306 PBDC1Q9BVG4 233 aa11.76□□□□□ -0.53
ERCC3-206ENST00000462306 DNASE2O00115 360 aaPredicted RBP11.75□□□□□ -0.53
ERCC3-206ENST00000462306 GOSR2O14653 212 aa11.75□□□□□ -0.53
ERCC3-206ENST00000462306 GATA2P23769 480 aaPredicted RBP11.75□□□□□ -0.53
ERCC3-206ENST00000462306 CMC4P56277 68 aaPredicted RBP11.75□□□□□ -0.53
ERCC3-206ENST00000462306 LYZP61626 148 aa11.75□□□□□ -0.53
ERCC3-206ENST00000462306 RRAS2P62070 204 aaPredicted RBP11.75□□□□□ -0.53
ERCC3-206ENST00000462306 APRG1Q8IVJ8 170 aa11.75□□□□□ -0.53
ERCC3-206ENST00000462306 FAM24BQ8N5W8 94 aa11.75□□□□□ -0.53
ERCC3-206ENST00000462306 SPATA25Q9BR10 227 aa11.75□□□□□ -0.53
ERCC3-206ENST00000462306 MAP6D1Q9H9H5 199 aa11.75□□□□□ -0.53
ERCC3-206ENST00000462306 LOC102724200A0A096LPH7 203 aaPredicted RBP11.74□□□□□ -0.53
ERCC3-206ENST00000462306 SMCO3A2RU48 225 aa11.74□□□□□ -0.53
ERCC3-206ENST00000462306 HELTA6NFD8 242 aa11.74□□□□□ -0.53
ERCC3-206ENST00000462306 K7EQG2 157 aa11.74□□□□□ -0.53
ERCC3-206ENST00000462306 CFDP00746 253 aaPredicted RBP11.74□□□□□ -0.53
ERCC3-206ENST00000462306 S100A10P60903 97 aa11.74□□□□□ -0.53
ERCC3-206ENST00000462306 ZNF124Q15973 351 aa11.74□□□□□ -0.53
ERCC3-206ENST00000462306 STXBP6Q8NFX7 210 aa11.74□□□□□ -0.53
ERCC3-206ENST00000462306 DCANP1Q8TF63 244 aa11.74□□□□□ -0.53
ERCC3-206ENST00000462306 WWC2-AS2Q96NR7 200 aa11.74□□□□□ -0.53
ERCC3-206ENST00000462306 GGACTQ9BVM4 153 aa11.74□□□□□ -0.53
ERCC3-206ENST00000462306 GGTLC1Q9BX51 225 aa11.74□□□□□ -0.53
ERCC3-206ENST00000462306 NPVFQ9HCQ7 196 aa11.74□□□□□ -0.53
ERCC3-206ENST00000462306 FAM24AA6NFZ4 105 aa11.73□□□□□ -0.53
ERCC3-206ENST00000462306 DEDDO75618 318 aa11.73□□□□□ -0.53
ERCC3-206ENST00000462306 PVALBP20472 110 aaPredicted RBP11.73□□□□□ -0.53
ERCC3-206ENST00000462306 NUP62P37198 522 aaPredicted RBP11.73□□□□□ -0.53
ERCC3-206ENST00000462306 BCAP31P51572 246 aa11.73□□□□□ -0.53
ERCC3-206ENST00000462306 CAV2P51636 162 aa11.73□□□□□ -0.53
ERCC3-206ENST00000462306 AP2S1P53680 142 aaPredicted RBP11.73□□□□□ -0.53
ERCC3-206ENST00000462306 CYP2G1PQ6ZSU1 146 aa11.73□□□□□ -0.53
ERCC3-206ENST00000462306 BPIFCQ8NFQ6 507 aa11.73□□□□□ -0.53
ERCC3-206ENST00000462306 NMES1Q9C002 83 aa11.73□□□□□ -0.53
ERCC3-206ENST00000462306 LYRM2Q9NU23 88 aaPredicted RBP11.73□□□□□ -0.53
ERCC3-206ENST00000462306 MGAT4CQ9UBM8 478 aa11.73□□□□□ -0.53
ERCC3-206ENST00000462306 NBEAL2Q6ZNJ1 2754 aa11.73□□□□□ -0.53
ERCC3-206ENST00000462306 PTTG1O95997 202 aa11.72□□□□□ -0.53
ERCC3-206ENST00000462306 H2BFSP57053 126 aa11.72□□□□□ -0.53
ERCC3-206ENST00000462306 SIGLEC15Q6ZMC9 328 aa11.72□□□□□ -0.53
ERCC3-206ENST00000462306 RETNQ9HD89 108 aa11.72□□□□□ -0.53
ERCC3-206ENST00000462306 PFDN2Q9UHV9 154 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms