RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 MED12LQ86YW9 2145 aa3.98□□□□□ -1.77
EPHA3-202ENST00000452448 DOCK6Q96HP0 2047 aa3.98□□□□□ -1.77
EPHA3-202ENST00000452448 SHROOM3Q8TF72 1996 aa3.98□□□□□ -1.77
EPHA3-202ENST00000452448 A0A0D9SEW6 157 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.97□□□□□ -1.77
EPHA3-202ENST00000452448 IRGMA1A4Y4 181 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 PRR32B1ATL7 298 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 SLC25A14O95258 325 aaPredicted RBP3.97□□□□□ -1.77
EPHA3-202ENST00000452448 ATP5G1P05496 136 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 CD52P31358 61 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 SAA4P35542 130 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 PTGDSP41222 190 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 ARFRP1Q13795 201 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 ASPHD1Q5U4P2 390 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 MORN3Q6PF18 240 aaPredicted RBP3.97□□□□□ -1.77
EPHA3-202ENST00000452448 ZNF493Q6ZR52 646 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 LINC00596Q86U02 117 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 SLC22A24Q8N4F4 322 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 OR2A1Q8NGT9 310 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 OR9G1Q8NH87 305 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 RBMXL1Q96E39 390 aaKnown RBP3.97□□□□□ -1.77
EPHA3-202ENST00000452448 AGPAT4-IT1Q9H0P7 198 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 RABAC1Q9UI14 185 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 AMMECR1Q9Y4X0 333 aaPredicted RBP3.97□□□□□ -1.77
EPHA3-202ENST00000452448 GBF1Q92538 1859 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 PLXNA4Q9HCM2 1894 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 OVOL3O00110 214 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 FCN1O00602 326 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 NCR2O95944 276 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 CD7P09564 240 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 OR5AL1P0C617 328 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 COX8AP10176 69 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 SRSF9Q13242 221 aaKnown RBP eCLIP3.97□□□□□ -1.77
EPHA3-202ENST00000452448 RSPO4Q2I0M5 234 aaPredicted RBP3.97□□□□□ -1.77
EPHA3-202ENST00000452448 FRG2Q64ET8 278 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 ZNF324BQ6AW86 544 aaPredicted RBP3.97□□□□□ -1.77
EPHA3-202ENST00000452448 NOXRED1Q6NXP6 359 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 ZNF322Q6U7Q0 402 aaPredicted RBP3.97□□□□□ -1.77
EPHA3-202ENST00000452448 DNM1P46Q6ZS02 220 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 CLDND2Q8NHS1 167 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 ZNF563Q8TA94 476 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 OR8B2Q96RD0 313 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 CMC2Q9NRP2 79 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 KIAA0100Q14667 2235 aaKnown RBP3.97□□□□□ -1.77
EPHA3-202ENST00000452448 DOCK8Q8NF50 2099 aa3.97□□□□□ -1.77
EPHA3-202ENST00000452448 SCN5AQ14524 2016 aa3.96□□□□□ -1.77
EPHA3-202ENST00000452448 CXorf51AA0A1B0GTR3 108 aa3.96□□□□□ -1.77
EPHA3-202ENST00000452448 E9PLD3 99 aa3.96□□□□□ -1.77
EPHA3-202ENST00000452448 C11orf98E9PRG8 122 aa3.96□□□□□ -1.77
EPHA3-202ENST00000452448 TCRAP04437 139 aa3.96□□□□□ -1.77
EPHA3-202ENST00000452448 CCL1P22362 96 aa3.96□□□□□ -1.77
EPHA3-202ENST00000452448 FCGR2CP31995 323 aa3.96□□□□□ -1.77
EPHA3-202ENST00000452448 LCN10Q6JVE6 187 aa3.96□□□□□ -1.77
EPHA3-202ENST00000452448 CYP2G1PQ6ZSU1 146 aa3.96□□□□□ -1.77
EPHA3-202ENST00000452448 C11orf53Q8IXP5 236 aa3.96□□□□□ -1.77
EPHA3-202ENST00000452448 KLHDC9Q8NEP7 349 aa3.96□□□□□ -1.77
EPHA3-202ENST00000452448 ZNF503Q96F45 646 aa3.96□□□□□ -1.77
EPHA3-202ENST00000452448 S1PR3Q99500 378 aa3.96□□□□□ -1.77
EPHA3-202ENST00000452448 APOOQ9BUR5 198 aa3.96□□□□□ -1.77
EPHA3-202ENST00000452448 SPANXDQ9BXN6 97 aa3.96□□□□□ -1.77
EPHA3-202ENST00000452448 GNB4Q9HAV0 340 aa3.96□□□□□ -1.77
EPHA3-202ENST00000452448 RBM12B-AS1Q9P1G2 102 aa3.96□□□□□ -1.77
EPHA3-202ENST00000452448 VWA8A3KMH1 1905 aa3.96□□□□□ -1.77
EPHA3-202ENST00000452448 NLRC5Q86WI3 1866 aa3.96□□□□□ -1.78
EPHA3-202ENST00000452448 HCFC1P51610 2035 aa3.96□□□□□ -1.78
EPHA3-202ENST00000452448 EXPH5Q8NEV8 1989 aa3.96□□□□□ -1.78
EPHA3-202ENST00000452448 KNCNA6PVL3 124 aa3.96□□□□□ -1.78
EPHA3-202ENST00000452448 A8MWV9 139 aa3.96□□□□□ -1.78
EPHA3-202ENST00000452448 CCL21O00585 134 aa3.96□□□□□ -1.78
EPHA3-202ENST00000452448 HOXA3O43365 443 aaPredicted RBP3.96□□□□□ -1.78
EPHA3-202ENST00000452448 LYPD3O95274 346 aa3.96□□□□□ -1.78
EPHA3-202ENST00000452448 PSMB8P28062 276 aa3.96□□□□□ -1.78
EPHA3-202ENST00000452448 RTL8BQ17RB0 113 aa3.96□□□□□ -1.78
EPHA3-202ENST00000452448 HES3Q5TGS1 186 aa3.96□□□□□ -1.78
EPHA3-202ENST00000452448 RFLNAQ6ZTI6 216 aa3.96□□□□□ -1.78
EPHA3-202ENST00000452448 TEN1Q86WV5 123 aa3.96□□□□□ -1.78
EPHA3-202ENST00000452448 LY6G5BQ8NDX9 201 aa3.96□□□□□ -1.78
EPHA3-202ENST00000452448 OR2T6Q8NHC8 308 aa3.96□□□□□ -1.78
EPHA3-202ENST00000452448 SHANK2-AS3Q9BTD1 123 aa3.96□□□□□ -1.78
EPHA3-202ENST00000452448 RTL8AQ9BWD3 113 aa3.96□□□□□ -1.78
EPHA3-202ENST00000452448 CKLFQ9UBR5 152 aa3.96□□□□□ -1.78
EPHA3-202ENST00000452448 OR2W1Q9Y3N9 320 aa3.96□□□□□ -1.78
EPHA3-202ENST00000452448 ARID1BQ8NFD5 2236 aaPredicted RBP3.96□□□□□ -1.78
EPHA3-202ENST00000452448 PTPRDP23468 1912 aa3.96□□□□□ -1.78
EPHA3-202ENST00000452448 FAM181BA6NEQ2 426 aa3.95□□□□□ -1.78
EPHA3-202ENST00000452448 PYYP10082 97 aa3.95□□□□□ -1.78
EPHA3-202ENST00000452448 HLA-DRB4P13762 266 aa3.95□□□□□ -1.78
EPHA3-202ENST00000452448 COX7CP15954 63 aa3.95□□□□□ -1.78
EPHA3-202ENST00000452448 HMGA2P52926 109 aa3.95□□□□□ -1.78
EPHA3-202ENST00000452448 CLDN17P56750 224 aa3.95□□□□□ -1.78
EPHA3-202ENST00000452448 SUMO2P61956 95 aaKnown RBP3.95□□□□□ -1.78
EPHA3-202ENST00000452448 EBI3Q14213 229 aa3.95□□□□□ -1.78
EPHA3-202ENST00000452448 MRPL2Q5T653 305 aaKnown RBP3.95□□□□□ -1.78
EPHA3-202ENST00000452448 CFAP126Q5VTH2 177 aa3.95□□□□□ -1.78
EPHA3-202ENST00000452448 C22orf39Q6P5X5 142 aa3.95□□□□□ -1.78
EPHA3-202ENST00000452448 FAM19A2Q8N3H0 131 aa3.95□□□□□ -1.78
EPHA3-202ENST00000452448 C15orf53Q8NAA6 179 aa3.95□□□□□ -1.78
EPHA3-202ENST00000452448 ZNF721Q8TF20 911 aa3.95□□□□□ -1.78
EPHA3-202ENST00000452448 GPX7Q96SL4 187 aaPredicted RBP3.95□□□□□ -1.78
EPHA3-202ENST00000452448 C16orf95Q9H693 158 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms