RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 CNTFRP26992 372 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 RPL22P35268 128 aaKnown RBP1.87□□□□□ -2.11
VPS8-211ENST00000452140 GLRXP35754 106 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 CA7P43166 264 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 HSPE1P61604 102 aaKnown RBP1.87□□□□□ -2.11
VPS8-211ENST00000452140 RHOBP62745 196 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 GNG5P63218 68 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 CDK6Q00534 326 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 DEFA5Q01523 94 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 CHD3Q12873 2000 aaKnown RBP1.87□□□□□ -2.11
VPS8-211ENST00000452140 SMCO1Q147U7 214 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 SURF2Q15527 256 aaPredicted RBP1.87□□□□□ -2.11
VPS8-211ENST00000452140 IAH1Q2TAA2 248 aaPredicted RBP1.87□□□□□ -2.11
VPS8-211ENST00000452140 PYY3Q5JQD4 70 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 NUP210LQ5VU65 1888 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 RICTORQ6R327 1708 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 CYHR1Q6ZMK1 362 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 GOLT1AQ6ZVE7 132 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 GRINAQ7Z429 371 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 OOSP2Q86WS3 158 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 DHFR2Q86XF0 187 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 PHF13Q86YI8 300 aaPredicted RBP1.87□□□□□ -2.11
VPS8-211ENST00000452140 C8orf59Q8N0T1 100 aaPredicted RBP1.87□□□□□ -2.11
VPS8-211ENST00000452140 C12orf45Q8N5I9 185 aaPredicted RBP1.87□□□□□ -2.11
VPS8-211ENST00000452140 EIF4E3Q8N5X7 224 aaKnown RBP1.87□□□□□ -2.11
VPS8-211ENST00000452140 C12orf29Q8N999 325 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 ST6GALNAC3Q8NDV1 305 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 OR11G2Q8NGC1 345 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 OR8A1Q8NGG7 326 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 MAFIPQ8WZ33 124 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 HYLS1Q96M11 299 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 ERMAPQ96PL5 475 aaPredicted RBP1.87□□□□□ -2.11
VPS8-211ENST00000452140 GGACTQ9BVM4 153 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 CCDC90BQ9GZT6 254 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 ZNF286AQ9HBT8 521 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 ZNF586Q9NXT0 402 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 SLC23A2Q9UGH3 650 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 MRPS16Q9Y3D3 137 aaKnown RBP1.87□□□□□ -2.11
VPS8-211ENST00000452140 TRAPPC1Q9Y5R8 145 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 ZNF407Q9C0G0 2248 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 NRXN3Q9Y4C0 1643 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 PLXNB1O43157 2135 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 DOCK4Q8N1I0 1966 aa1.87□□□□□ -2.11
VPS8-211ENST00000452140 XIRP1Q702N8 1843 aaKnown RBP1.87□□□□□ -2.11
VPS8-211ENST00000452140 PLIN4Q96Q06 1357 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 hCG_1818297A0A087WSY0 165 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 TRAPPC13A5PLN9 417 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 A6NED7 52 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 A8MT66 165 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 DLEU1O43261 78 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 APOMO95445 188 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 MT-CO2P00403 227 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 IGF2P01344 180 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 SMIM17P0DL12 118 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 CGB3P0DN86 165 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 CGB7P0DN87 165 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 PTHLHP12272 177 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 HLA-EP13747 358 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 ZNF25P17030 456 aaPredicted RBP1.86□□□□□ -2.11
VPS8-211ENST00000452140 CDK2P24941 298 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 NFYBP25208 207 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 S100A7P31151 101 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 FOXA1P55317 472 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 TPI1P60174 286 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 BTG2P78543 158 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 RHEBQ15382 184 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 OR8G1Q15617 311 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 NCMAPQ5T1S8 102 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 HAGHLQ6PII5 290 aaPredicted RBP1.86□□□□□ -2.11
VPS8-211ENST00000452140 LRP11Q86VZ4 500 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 FER1L6-AS1Q8NA97 138 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 OR10A6Q8NH74 314 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 RNASE11Q8TAA1 199 aaKnown RBP1.86□□□□□ -2.11
VPS8-211ENST00000452140 MUC7Q8TAX7 377 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 CT55Q8WUE5 264 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 GNPNAT1Q96EK6 184 aaPredicted RBP1.86□□□□□ -2.11
VPS8-211ENST00000452140 TEX37Q96LM6 180 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 PPP3R2Q96LZ3 170 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 CCL13Q99616 98 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 PKMYT1Q99640 499 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 AIF1LQ9BQI0 150 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 TMEM222Q9H0R3 208 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 RNF122Q9H9V4 155 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 PRTFDC1Q9NRG1 225 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 METTL1Q9UBP6 276 aaKnown RBP1.86□□□□□ -2.11
VPS8-211ENST00000452140 PRNDQ9UKY0 176 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 NUBP2Q9Y5Y2 271 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 PARP14Q460N5 1801 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 CCDC88CQ9P219 2028 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 ADAMTS7Q9UKP4 1686 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 WDR90Q96KV7 1748 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 ABCA3Q99758 1704 aa1.86□□□□□ -2.11
VPS8-211ENST00000452140 STRCQ7RTU9 1775 aa1.85□□□□□ -2.11
VPS8-211ENST00000452140 SEC16AO15027 2179 aa1.85□□□□□ -2.11
VPS8-211ENST00000452140 SHANK1Q9Y566 2161 aa1.85□□□□□ -2.11
VPS8-211ENST00000452140 TECPR2O15040 1411 aa1.85□□□□□ -2.11
VPS8-211ENST00000452140 MEIKINA0A087WXM9 373 aa1.85□□□□□ -2.11
VPS8-211ENST00000452140 IGHV1-69-2A0A0G2JMI3 117 aa1.85□□□□□ -2.11
VPS8-211ENST00000452140 LOC100130705A0A1B0GUX0 176 aa1.85□□□□□ -2.11
VPS8-211ENST00000452140 MAP1LC3B2A6NCE7 125 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms