RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 SHANK1Q9Y566 2161 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 IGKV1-6A0A0C4DH72 117 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 A0A1B0GW64 132 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 IGSF23A1L1A6 192 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 FAM24AA6NFZ4 105 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 ATP6V1G2-DDX39BF2Z307 99 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 M0R036 132 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 CDIPTO14735 213 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 PGLYRP1O75594 196 aaPredicted RBP2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 EIF3GO75821 320 aaKnown RBP eCLIP2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 OR2H2O95918 312 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 IFNA1P01562 189 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 PAX6P26367 422 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 ATP6V0CP27449 155 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 SULT1A1P50225 295 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 TAS2R30P59541 319 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 RAB5BP61020 215 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 RPS23P62266 143 aaKnown RBP2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 EIF4EBP1Q13541 118 aaPredicted RBP2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 RHEBQ15382 184 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 IGFBP7Q16270 282 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 AKIRIN2Q53H80 203 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 SMUG1Q53HV7 270 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 AVPI1Q5T686 147 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 Q6ZR03 302 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 ZNF645Q8N7E2 425 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 TCTEX1D1Q8N7M0 179 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 C15orf56Q8N910 161 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 OR10Z1Q8NGY1 313 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 OR8U1Q8NH10 309 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 OR51H1Q8NH63 302 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 LYPD6BQ8NI32 183 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 SCGB1C1Q8TD33 95 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 KLF14Q8TD94 323 aaPredicted RBP2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 GALMQ96C23 342 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 RBMXL1Q96E39 390 aaKnown RBP2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 TLNRD1Q9H1K6 362 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 SLC35B3Q9H1N7 401 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 C11orf1Q9H5F2 150 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 WFDC1Q9HC57 220 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 KCNJ16Q9NPI9 418 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 MED13Q9UHV7 2174 aa2.65□□□□□ -1.99
HMGB3P6-201ENST00000444896 CACNA1HO95180 2353 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 IGHV2OR16-5A0A0B4J2B6 119 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 A0A1B0GV50 99 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 C1orf196B1AJZ1 125 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 SYNGR2O43760 224 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 CHST1O43916 411 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 SOX15O60248 233 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 CST7O76096 145 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 CECR9P0C854 216 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 IAPPP10997 89 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 MPV17P39210 176 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 CEACAM6P40199 344 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 CDKN1BP46527 198 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 GABRA2P47869 451 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 PLP1P60201 277 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 ERVS71-1P61550 626 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 TMEM267Q0VDI3 215 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 SLAQ13239 276 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 GUSBP1Q15486 140 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 DEFB109BQ30KR1 87 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 SOHLH1Q5JUK2 328 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 C19orf35Q6ZS72 473 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 BHLHA15Q7RTS1 189 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 WDR86Q86TI4 376 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 MED12LQ86YW9 2145 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 CBLN2Q8IUK8 224 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 FDCSPQ8NFU4 85 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 PLPPR1Q8TBJ4 325 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 GPR146Q96CH1 333 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 CIB3Q96Q77 187 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 PSMG3Q9BT73 122 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 PARD6GQ9BYG4 376 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 PARP12Q9H0J9 701 aaKnown RBP2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 OR2D2Q9H210 308 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 SH3BGRL3Q9H299 93 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 HES4Q9HCC6 221 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 ASCL3Q9NQ33 180 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 BIN3Q9NQY0 253 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 COA4Q9NYJ1 87 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 PSENENQ9NZ42 101 aa2.64□□□□□ -1.99
HMGB3P6-201ENST00000444896 PCNX2A6NKB5 2137 aa2.63□□□□□ -1.99
HMGB3P6-201ENST00000444896 ESPL1Q14674 2120 aa2.63□□□□□ -1.99
HMGB3P6-201ENST00000444896 BDP1A6H8Y1 2624 aa2.63□□□□□ -1.99
HMGB3P6-201ENST00000444896 VPS13AQ96RL7 3174 aa2.63□□□□□ -1.99
HMGB3P6-201ENST00000444896 TRAV1-1A0A0B4J248 108 aa2.63□□□□□ -1.99
HMGB3P6-201ENST00000444896 IGHV1-18A0A0C4DH31 117 aa2.63□□□□□ -1.99
HMGB3P6-201ENST00000444896 UBE2L5PA0A1B0GUS4 154 aa2.63□□□□□ -1.99
HMGB3P6-201ENST00000444896 SPAARA0A1B0GVQ0 90 aa2.63□□□□□ -1.99
HMGB3P6-201ENST00000444896 LRCOL1A6NCL2 159 aa2.63□□□□□ -1.99
HMGB3P6-201ENST00000444896 RBFOX3A6NFN3 312 aa2.63□□□□□ -1.99
HMGB3P6-201ENST00000444896 OR5H1A6NKK0 313 aa2.63□□□□□ -1.99
HMGB3P6-201ENST00000444896 C17orf112F2Z3M2 114 aa2.63□□□□□ -1.99
HMGB3P6-201ENST00000444896 H3BP45 60 aa2.63□□□□□ -1.99
HMGB3P6-201ENST00000444896 RAB29O14966 203 aa2.63□□□□□ -1.99
HMGB3P6-201ENST00000444896 IFNA17P01571 189 aa2.63□□□□□ -1.99
HMGB3P6-201ENST00000444896 HBZP02008 142 aa2.63□□□□□ -1.99
HMGB3P6-201ENST00000444896 MBP02144 154 aa2.63□□□□□ -1.99
HMGB3P6-201ENST00000444896 MT-ND4LP03901 98 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms