RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 TREML4Q6UXN2 200 aa12.43□□□□□ -0.42
TSC2-206ENST00000439117 ZNRF1Q8ND25 227 aa12.43□□□□□ -0.42
TSC2-206ENST00000439117 PSG8Q9UQ74 426 aa12.43□□□□□ -0.42
TSC2-206ENST00000439117 ESPL1Q14674 2120 aa12.43□□□□□ -0.42
TSC2-206ENST00000439117 TMEM14EPQ6UXP3 125 aa12.43□□□□□ -0.42
TSC2-206ENST00000439117 EEF1AKMT3Q96AZ1 226 aa12.43□□□□□ -0.42
TSC2-206ENST00000439117 TNFRSF18Q9Y5U5 241 aa12.43□□□□□ -0.42
TSC2-206ENST00000439117 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.43□□□□□ -0.42
TSC2-206ENST00000439117 TCRBV4S1A1TA0A5B7 111 aa12.43□□□□□ -0.42
TSC2-206ENST00000439117 GHRHP01286 108 aa12.43□□□□□ -0.42
TSC2-206ENST00000439117 PF4V1P10720 104 aa12.43□□□□□ -0.42
TSC2-206ENST00000439117 RNF182Q8N6D2 247 aa12.43□□□□□ -0.42
TSC2-206ENST00000439117 MGST2Q99735 147 aa12.43□□□□□ -0.42
TSC2-206ENST00000439117 PRTN3P24158 256 aa12.43□□□□□ -0.42
TSC2-206ENST00000439117 KLF2Q9Y5W3 355 aaPredicted RBP12.43□□□□□ -0.42
TSC2-206ENST00000439117 YPEL1O60688 119 aa12.42□□□□□ -0.42
TSC2-206ENST00000439117 YPEL2Q96QA6 119 aa12.42□□□□□ -0.42
TSC2-206ENST00000439117 IGLC2P0DOY2 106 aa12.42□□□□□ -0.42
TSC2-206ENST00000439117 IGLC3P0DOY3 106 aa12.42□□□□□ -0.42
TSC2-206ENST00000439117 BMPERQ8N8U9 685 aa12.42□□□□□ -0.42
TSC2-206ENST00000439117 JMJD8Q96S16 334 aa12.42□□□□□ -0.42
TSC2-206ENST00000439117 CACNA1BQ00975 2339 aa12.42□□□□□ -0.42
TSC2-206ENST00000439117 RBMY1BA6NDE4 496 aaKnown RBP12.42□□□□□ -0.42
TSC2-206ENST00000439117 RBMY1EA6NEQ0 496 aaKnown RBP12.42□□□□□ -0.42
TSC2-206ENST00000439117 F2Z2F3 143 aa12.42□□□□□ -0.42
TSC2-206ENST00000439117 RBMY1DP0C7P1 496 aaKnown RBP12.42□□□□□ -0.42
TSC2-206ENST00000439117 RBMY1A1P0DJD3 496 aaKnown RBP12.42□□□□□ -0.42
TSC2-206ENST00000439117 RBMY1CP0DJD4 496 aa12.42□□□□□ -0.42
TSC2-206ENST00000439117 PYYP10082 97 aa12.42□□□□□ -0.42
TSC2-206ENST00000439117 SPSB3Q6PJ21 355 aa12.42□□□□□ -0.42
TSC2-206ENST00000439117 FAM90A1Q86YD7 464 aa12.42□□□□□ -0.42
TSC2-206ENST00000439117 CNTFRP26992 372 aa12.42□□□□□ -0.42
TSC2-206ENST00000439117 ATP5G2Q06055 141 aa12.42□□□□□ -0.42
TSC2-206ENST00000439117 DMRTA2Q96SC8 542 aa12.42□□□□□ -0.42
TSC2-206ENST00000439117 SPRR3Q9UBC9 169 aa12.42□□□□□ -0.42
TSC2-206ENST00000439117 CELA3BP08861 270 aa12.41□□□□□ -0.42
TSC2-206ENST00000439117 KIF26BQ2KJY2 2108 aa12.41□□□□□ -0.42
TSC2-206ENST00000439117 EFNA2O43921 213 aa12.41□□□□□ -0.42
TSC2-206ENST00000439117 FOXH1O75593 365 aa12.41□□□□□ -0.42
TSC2-206ENST00000439117 RNASE6Q93091 150 aaKnown RBP12.41□□□□□ -0.42
TSC2-206ENST00000439117 RAX2Q96IS3 184 aa12.41□□□□□ -0.42
TSC2-206ENST00000439117 C21orf62Q9NYP8 219 aa12.41□□□□□ -0.42
TSC2-206ENST00000439117 WDR81Q562E7 1941 aa12.41□□□□□ -0.42
TSC2-206ENST00000439117 TRAV2A0A0B4J234 112 aa12.41□□□□□ -0.42
TSC2-206ENST00000439117 MMP23AO75900 390 aa12.41□□□□□ -0.42
TSC2-206ENST00000439117 IFI27P40305 119 aaPredicted RBP12.41□□□□□ -0.42
TSC2-206ENST00000439117 RHOGP84095 191 aa12.41□□□□□ -0.42
TSC2-206ENST00000439117 RRN3P1Q2M238 152 aa12.41□□□□□ -0.42
TSC2-206ENST00000439117 ARPC1AQ92747 370 aa12.41□□□□□ -0.42
TSC2-206ENST00000439117 CCL19Q99731 98 aa12.41□□□□□ -0.42
TSC2-206ENST00000439117 FOXA2Q9Y261 457 aaPredicted RBP12.41□□□□□ -0.42
TSC2-206ENST00000439117 SLC25A15Q9Y619 301 aa12.41□□□□□ -0.42
TSC2-206ENST00000439117 SELENOKQ9Y6D0 94 aa12.41□□□□□ -0.42
TSC2-206ENST00000439117 ZNF497Q6ZNH5 498 aa12.4□□□□□ -0.42
TSC2-206ENST00000439117 POLEQ07864 2286 aa12.4□□□□□ -0.42
TSC2-206ENST00000439117 PSMB11A5LHX3 300 aa12.4□□□□□ -0.42
TSC2-206ENST00000439117 IQCF6A8MYZ5 107 aa12.4□□□□□ -0.42
TSC2-206ENST00000439117 RAMP3O60896 148 aa12.4□□□□□ -0.42
TSC2-206ENST00000439117 PRCDQ00LT1 54 aa12.4□□□□□ -0.42
TSC2-206ENST00000439117 RSPO3Q9BXY4 272 aaPredicted RBP12.4□□□□□ -0.42
TSC2-206ENST00000439117 PVRIGQ6DKI7 326 aa12.4□□□□□ -0.42
TSC2-206ENST00000439117 GTSCR1Q86UQ5 136 aa12.4□□□□□ -0.42
TSC2-206ENST00000439117 PLSCR4Q9NRQ2 329 aa12.4□□□□□ -0.42
TSC2-206ENST00000439117 LYZL4Q96KX0 146 aa12.4□□□□□ -0.43
TSC2-206ENST00000439117 SCN8AQ9UQD0 1980 aa12.39□□□□□ -0.43
TSC2-206ENST00000439117 SMAD7O15105 426 aaKnown RBP12.39□□□□□ -0.43
TSC2-206ENST00000439117 FAM71F2Q6NXP2 309 aa12.39□□□□□ -0.43
TSC2-206ENST00000439117 NEU4Q8WWR8 484 aaPredicted RBP12.39□□□□□ -0.43
TSC2-206ENST00000439117 TMEM238C9JI98 176 aa12.39□□□□□ -0.43
TSC2-206ENST00000439117 PAX1P15863 534 aa12.39□□□□□ -0.43
TSC2-206ENST00000439117 SNRPD3P62318 126 aaKnown RBP12.39□□□□□ -0.43
TSC2-206ENST00000439117 TMEM155Q4W5P6 130 aa12.39□□□□□ -0.43
TSC2-206ENST00000439117 WBP1Q96G27 269 aa12.39□□□□□ -0.43
TSC2-206ENST00000439117 TRAV12-3A0A0B4J271 114 aa12.39□□□□□ -0.43
TSC2-206ENST00000439117 ZNF319Q9P2F9 582 aa12.39□□□□□ -0.43
TSC2-206ENST00000439117 MDC1Q14676 2089 aaKnown RBP12.39□□□□□ -0.43
TSC2-206ENST00000439117 FAM231BA6NCW3 169 aa12.39□□□□□ -0.43
TSC2-206ENST00000439117 E9PLN8 166 aa12.39□□□□□ -0.43
TSC2-206ENST00000439117 SAA1P0DJI8 122 aaPredicted RBP12.38□□□□□ -0.43
TSC2-206ENST00000439117 HGFACQ04756 655 aa12.38□□□□□ -0.43
TSC2-206ENST00000439117 ZIC4Q8N9L1 334 aa12.38□□□□□ -0.43
TSC2-206ENST00000439117 NUP35Q8NFH5 326 aa12.38□□□□□ -0.43
TSC2-206ENST00000439117 SLC50A1Q9BRV3 221 aa12.38□□□□□ -0.43
TSC2-206ENST00000439117 IGHV3-35A0A0C4DH35 117 aa12.38□□□□□ -0.43
TSC2-206ENST00000439117 CLPSP04118 112 aa12.38□□□□□ -0.43
TSC2-206ENST00000439117 Q0VFX4 171 aa12.38□□□□□ -0.43
TSC2-206ENST00000439117 TMEM101Q96IK0 257 aa12.38□□□□□ -0.43
TSC2-206ENST00000439117 CITED1Q99966 193 aa12.38□□□□□ -0.43
TSC2-206ENST00000439117 C17orf100A8MU93 164 aa12.38□□□□□ -0.43
TSC2-206ENST00000439117 FAM201AQ5SY85 155 aa12.38□□□□□ -0.43
TSC2-206ENST00000439117 GGNQ86UU5 652 aa12.38□□□□□ -0.43
TSC2-206ENST00000439117 K7EP13 123 aa12.38□□□□□ -0.43
TSC2-206ENST00000439117 DUTP33316 252 aaKnown RBP12.38□□□□□ -0.43
TSC2-206ENST00000439117 DMRTC2Q8IXT2 367 aaPredicted RBP12.38□□□□□ -0.43
TSC2-206ENST00000439117 ZNF48Q96MX3 618 aaPredicted RBP12.37□□□□□ -0.43
TSC2-206ENST00000439117 FBXL15Q9H469 300 aa12.37□□□□□ -0.43
TSC2-206ENST00000439117 FBXL7Q9UJT9 491 aa12.37□□□□□ -0.43
TSC2-206ENST00000439117 RFNGQ9Y644 331 aa12.37□□□□□ -0.43
TSC2-206ENST00000439117 M0R2P5 195 aa12.37□□□□□ -0.43
TSC2-206ENST00000439117 LAGE3Q14657 143 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms