RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 SULT1A3P0DMM9 295 aa13.04□□□□□ -0.32
GTF3A-204ENST00000438571 SULT1A4P0DMN0 295 aa13.04□□□□□ -0.32
GTF3A-204ENST00000438571 ALDH3B2P48448 385 aa13.04□□□□□ -0.32
GTF3A-204ENST00000438571 MRPS10P82664 201 aaKnown RBP13.04□□□□□ -0.32
GTF3A-204ENST00000438571 IL18Q14116 193 aa13.04□□□□□ -0.32
GTF3A-204ENST00000438571 RBKSQ9H477 322 aa13.04□□□□□ -0.32
GTF3A-204ENST00000438571 PKD1P98161 4303 aa13.03□□□□□ -0.32
GTF3A-204ENST00000438571 IGKV1D-37A0A075B6S9 117 aa13.03□□□□□ -0.32
GTF3A-204ENST00000438571 DEFB131BA0A096LNP1 70 aa13.03□□□□□ -0.32
GTF3A-204ENST00000438571 IFNA10P01566 189 aa13.03□□□□□ -0.32
GTF3A-204ENST00000438571 IGKV3-20P01619 116 aa13.03□□□□□ -0.32
GTF3A-204ENST00000438571 RD3LP0DJH9 198 aa13.03□□□□□ -0.32
GTF3A-204ENST00000438571 AP2S1P53680 142 aaPredicted RBP13.03□□□□□ -0.32
GTF3A-204ENST00000438571 SUPT4H1P63272 117 aaKnown RBP13.03□□□□□ -0.32
GTF3A-204ENST00000438571 LYZL2Q7Z4W2 148 aa13.03□□□□□ -0.32
GTF3A-204ENST00000438571 CLVS1Q8IUQ0 354 aaPredicted RBP13.03□□□□□ -0.32
GTF3A-204ENST00000438571 RNF125Q96EQ8 232 aa13.03□□□□□ -0.32
GTF3A-204ENST00000438571 RNF126Q9BV68 326 aa13.03□□□□□ -0.32
GTF3A-204ENST00000438571 PBDC1Q9BVG4 233 aa13.03□□□□□ -0.32
GTF3A-204ENST00000438571 WDR12Q9GZL7 423 aaKnown RBP13.03□□□□□ -0.32
GTF3A-204ENST00000438571 ANKRD20A5PA0PJZ0 165 aa13.02□□□□□ -0.33
GTF3A-204ENST00000438571 CTDSPLO15194 276 aa13.02□□□□□ -0.33
GTF3A-204ENST00000438571 AMBPP02760 352 aa13.02□□□□□ -0.33
GTF3A-204ENST00000438571 HLA-DRB4P13762 266 aa13.02□□□□□ -0.33
GTF3A-204ENST00000438571 SNRPD3P62318 126 aaKnown RBP13.02□□□□□ -0.33
GTF3A-204ENST00000438571 ZNF90Q03938 601 aa13.02□□□□□ -0.33
GTF3A-204ENST00000438571 ETFRF1Q6IPR1 90 aa13.02□□□□□ -0.33
GTF3A-204ENST00000438571 DTD1Q8TEA8 209 aa13.02□□□□□ -0.33
GTF3A-204ENST00000438571 DIRAS2Q96HU8 199 aa13.02□□□□□ -0.33
GTF3A-204ENST00000438571 PRRT1Q99946 306 aa13.02□□□□□ -0.33
GTF3A-204ENST00000438571 HSPB7Q9UBY9 170 aa13.02□□□□□ -0.33
GTF3A-204ENST00000438571 HLA-DRB4X5D2U9 266 aa13.02□□□□□ -0.33
GTF3A-204ENST00000438571 SMCO1Q147U7 214 aa13.01□□□□□ -0.33
GTF3A-204ENST00000438571 ZNF705AQ6ZN79 300 aaPredicted RBP13.01□□□□□ -0.33
GTF3A-204ENST00000438571 GPR141Q7Z602 305 aa13.01□□□□□ -0.33
GTF3A-204ENST00000438571 IL22RA2Q969J5 263 aa13.01□□□□□ -0.33
GTF3A-204ENST00000438571 SOCS3O14543 225 aa13□□□□□ -0.33
GTF3A-204ENST00000438571 GSTZ1O43708 216 aaPredicted RBP13□□□□□ -0.33
GTF3A-204ENST00000438571 LGI3Q8N145 548 aa13□□□□□ -0.33
GTF3A-204ENST00000438571 DYNC2LI1Q8TCX1 351 aa13□□□□□ -0.33
GTF3A-204ENST00000438571 MRPS26Q9BYN8 205 aaKnown RBP13□□□□□ -0.33
GTF3A-204ENST00000438571 SEPSECSQ9HD40 501 aaKnown RBP13□□□□□ -0.33
GTF3A-204ENST00000438571 MUC4Q99102 2169 aa13□□□□□ -0.33
GTF3A-204ENST00000438571 A0A0B4J2A0 478 aa12.99□□□□□ -0.33
GTF3A-204ENST00000438571 A0A1B0GVY2 172 aa12.99□□□□□ -0.33
GTF3A-204ENST00000438571 AKR1C4P17516 323 aa12.99□□□□□ -0.33
GTF3A-204ENST00000438571 NKX2-1P43699 371 aaPredicted RBP12.99□□□□□ -0.33
GTF3A-204ENST00000438571 CCR6P51684 374 aa12.99□□□□□ -0.33
GTF3A-204ENST00000438571 EMP1P54849 157 aa12.99□□□□□ -0.33
GTF3A-204ENST00000438571 KLF9Q13886 244 aaPredicted RBP12.99□□□□□ -0.33
GTF3A-204ENST00000438571 GAMTQ14353 236 aa12.99□□□□□ -0.33
GTF3A-204ENST00000438571 LINC00052Q96N35 136 aa12.99□□□□□ -0.33
GTF3A-204ENST00000438571 C1QTNF4Q9BXJ3 329 aa12.99□□□□□ -0.33
GTF3A-204ENST00000438571 SHPKQ9UHJ6 478 aa12.99□□□□□ -0.33
GTF3A-204ENST00000438571 U3KQ87 197 aa12.99□□□□□ -0.33
GTF3A-204ENST00000438571 RYR1P21817 5038 aa12.99□□□□□ -0.33
GTF3A-204ENST00000438571 IGHV3OR16-12A0A075B7B8 117 aa12.98□□□□□ -0.33
GTF3A-204ENST00000438571 ZFP92A6NM28 416 aa12.98□□□□□ -0.33
GTF3A-204ENST00000438571 ZNF705FA8MVS1 300 aaPredicted RBP12.98□□□□□ -0.33
GTF3A-204ENST00000438571 F6UB75 175 aa12.98□□□□□ -0.33
GTF3A-204ENST00000438571 ZNF705DP0CH99 300 aaPredicted RBP12.98□□□□□ -0.33
GTF3A-204ENST00000438571 ZNF705BP0CI00 300 aaPredicted RBP12.98□□□□□ -0.33
GTF3A-204ENST00000438571 LYZP61626 148 aa12.98□□□□□ -0.33
GTF3A-204ENST00000438571 NUTF2P61970 127 aaKnown RBP12.98□□□□□ -0.33
GTF3A-204ENST00000438571 OR2F1Q13607 317 aa12.98□□□□□ -0.33
GTF3A-204ENST00000438571 NOXA1Q86UR1 476 aa12.98□□□□□ -0.33
GTF3A-204ENST00000438571 CENPSQ8N2Z9 138 aa12.98□□□□□ -0.33
GTF3A-204ENST00000438571 ZNF709Q8N972 641 aa12.98□□□□□ -0.33
GTF3A-204ENST00000438571 SLC35B3Q9H1N7 401 aa12.98□□□□□ -0.33
GTF3A-204ENST00000438571 SAV1Q9H4B6 383 aaPredicted RBP12.98□□□□□ -0.33
GTF3A-204ENST00000438571 MCUBQ9NWR8 336 aa12.98□□□□□ -0.33
GTF3A-204ENST00000438571 PLA2G2EQ9NZK7 142 aa12.98□□□□□ -0.33
GTF3A-204ENST00000438571 CCDC59Q9P031 241 aaKnown RBP12.98□□□□□ -0.33
GTF3A-204ENST00000438571 IGKV1OR2-108A0A075B7D4 117 aa12.97□□□□□ -0.33
GTF3A-204ENST00000438571 M0R2N4 97 aa12.97□□□□□ -0.33
GTF3A-204ENST00000438571 IAPPP10997 89 aa12.97□□□□□ -0.33
GTF3A-204ENST00000438571 OR8G2PQ6IF36 304 aa12.97□□□□□ -0.33
GTF3A-204ENST00000438571 KCNIP3Q9Y2W7 256 aa12.97□□□□□ -0.33
GTF3A-204ENST00000438571 RTL8CO15255 209 aa12.96□□□□□ -0.33
GTF3A-204ENST00000438571 POM121L12Q8N7R1 296 aa12.96□□□□□ -0.33
GTF3A-204ENST00000438571 OR1S1Q8NH92 325 aa12.96□□□□□ -0.33
GTF3A-204ENST00000438571 SLC35E1Q96K37 410 aa12.96□□□□□ -0.33
GTF3A-204ENST00000438571 NEU1Q99519 415 aa12.96□□□□□ -0.33
GTF3A-204ENST00000438571 NDUFAF3Q9BU61 184 aa12.96□□□□□ -0.33
GTF3A-204ENST00000438571 SCP2D1Q9UJQ7 156 aa12.96□□□□□ -0.33
GTF3A-204ENST00000438571 FOXI2Q6ZQN5 318 aa12.95□□□□□ -0.34
GTF3A-204ENST00000438571 OR4B1Q8NGF8 309 aa12.95□□□□□ -0.34
GTF3A-204ENST00000438571 C20orf173Q96LM9 149 aa12.95□□□□□ -0.34
GTF3A-204ENST00000438571 C17orf77Q96MU5 243 aa12.95□□□□□ -0.34
GTF3A-204ENST00000438571 SOSTQ9BQB4 213 aa12.95□□□□□ -0.34
GTF3A-204ENST00000438571 SLIRPQ9GZT3 109 aaKnown RBP12.95□□□□□ -0.34
GTF3A-204ENST00000438571 ABCA13Q86UQ4 5058 aa12.95□□□□□ -0.34
GTF3A-204ENST00000438571 PITX3O75364 302 aa12.94□□□□□ -0.34
GTF3A-204ENST00000438571 PSMB3P49720 205 aa12.94□□□□□ -0.34
GTF3A-204ENST00000438571 ZNF79Q15937 498 aa12.94□□□□□ -0.34
GTF3A-204ENST00000438571 FAM222AQ5U5X8 452 aa12.94□□□□□ -0.34
GTF3A-204ENST00000438571 LINC00336Q6ZUF6 198 aa12.94□□□□□ -0.34
GTF3A-204ENST00000438571 TMED4Q7Z7H5 227 aa12.94□□□□□ -0.34
GTF3A-204ENST00000438571 C1orf158Q8N1D5 194 aa12.94□□□□□ -0.34
GTF3A-204ENST00000438571 COQ8AQ8NI60 647 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms