RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 WBP1Q96G27 269 aa9.45□□□□□ -0.9
SEC16A-206ENST00000431893 SH2D1AO60880 128 aa9.45□□□□□ -0.9
SEC16A-206ENST00000431893 ATP5IP56385 69 aaPredicted RBP9.45□□□□□ -0.9
SEC16A-206ENST00000431893 PAX8Q06710 450 aa9.45□□□□□ -0.9
SEC16A-206ENST00000431893 KIR3DS1Q14943 382 aa9.45□□□□□ -0.9
SEC16A-206ENST00000431893 SRSF7Q16629 238 aaKnown RBP eCLIP9.45□□□□□ -0.9
SEC16A-206ENST00000431893 FAM90A2PQ658T7 463 aa9.45□□□□□ -0.9
SEC16A-206ENST00000431893 FAM57AQ8TBR7 257 aa9.45□□□□□ -0.9
SEC16A-206ENST00000431893 MGST2Q99735 147 aa9.45□□□□□ -0.9
SEC16A-206ENST00000431893 LGALS1P09382 135 aaKnown RBP9.44□□□□□ -0.9
SEC16A-206ENST00000431893 PVRIGQ6DKI7 326 aa9.44□□□□□ -0.9
SEC16A-206ENST00000431893 C8orf46Q8TAG6 207 aa9.44□□□□□ -0.9
SEC16A-206ENST00000431893 SLC50A1Q9BRV3 221 aa9.44□□□□□ -0.9
SEC16A-206ENST00000431893 TMEM133Q9H2Q1 129 aa9.44□□□□□ -0.9
SEC16A-206ENST00000431893 COLCA2A8K830 154 aa9.44□□□□□ -0.9
SEC16A-206ENST00000431893 F8VVB4 439 aa9.44□□□□□ -0.9
SEC16A-206ENST00000431893 F8VWA3 439 aa9.44□□□□□ -0.9
SEC16A-206ENST00000431893 TRGV1A0A0A0MS02 117 aa9.44□□□□□ -0.9
SEC16A-206ENST00000431893 PINLYPA6NC86 204 aa9.44□□□□□ -0.9
SEC16A-206ENST00000431893 KLF17Q5JT82 389 aaPredicted RBP9.44□□□□□ -0.9
SEC16A-206ENST00000431893 UBE2E2Q96LR5 201 aa9.44□□□□□ -0.9
SEC16A-206ENST00000431893 LINC00477Q96M19 166 aa9.44□□□□□ -0.9
SEC16A-206ENST00000431893 CITED1Q99966 193 aa9.44□□□□□ -0.9
SEC16A-206ENST00000431893 SAP30O75446 220 aa9.44□□□□□ -0.9
SEC16A-206ENST00000431893 SPINK8P0C7L1 97 aa9.44□□□□□ -0.9
SEC16A-206ENST00000431893 ADAMTSL5Q6ZMM2 481 aa9.44□□□□□ -0.9
SEC16A-206ENST00000431893 DLEU1O43261 78 aa9.44□□□□□ -0.9
SEC16A-206ENST00000431893 ERCC8Q13216 396 aa9.44□□□□□ -0.9
SEC16A-206ENST00000431893 SLC25A39Q9BZJ4 359 aaPredicted RBP9.44□□□□□ -0.9
SEC16A-206ENST00000431893 TREML4Q6UXN2 200 aa9.43□□□□□ -0.9
SEC16A-206ENST00000431893 SP7Q8TDD2 431 aaPredicted RBP9.43□□□□□ -0.9
SEC16A-206ENST00000431893 SPXQ9BT56 116 aa9.43□□□□□ -0.9
SEC16A-206ENST00000431893 TRAV13-1A0A0B4J241 112 aa9.43□□□□□ -0.9
SEC16A-206ENST00000431893 CSTL1Q9H114 145 aa9.43□□□□□ -0.9
SEC16A-206ENST00000431893 COL4A1P02462 1669 aa9.43□□□□□ -0.9
SEC16A-206ENST00000431893 YPEL1O60688 119 aa9.43□□□□□ -0.9
SEC16A-206ENST00000431893 SEC11AP67812 179 aa9.43□□□□□ -0.9
SEC16A-206ENST00000431893 NUP35Q8NFH5 326 aa9.43□□□□□ -0.9
SEC16A-206ENST00000431893 NEU4Q8WWR8 484 aaPredicted RBP9.43□□□□□ -0.9
SEC16A-206ENST00000431893 YPEL2Q96QA6 119 aa9.43□□□□□ -0.9
SEC16A-206ENST00000431893 TRGV11A0A075B6L2 103 aa9.43□□□□□ -0.9
SEC16A-206ENST00000431893 PAQR4Q8N4S7 273 aaPredicted RBP9.43□□□□□ -0.9
SEC16A-206ENST00000431893 TMEM158Q8WZ71 300 aa9.43□□□□□ -0.9
SEC16A-206ENST00000431893 IGHV1-18A0A0C4DH31 117 aa9.43□□□□□ -0.9
SEC16A-206ENST00000431893 A0A1B0GUS0 222 aa9.43□□□□□ -0.9
SEC16A-206ENST00000431893 VWC2LB2RUY7 222 aa9.43□□□□□ -0.9
SEC16A-206ENST00000431893 FCN3O75636 299 aa9.43□□□□□ -0.9
SEC16A-206ENST00000431893 VMO1Q7Z5L0 202 aa9.43□□□□□ -0.9
SEC16A-206ENST00000431893 C14orf178Q8N769 122 aaPredicted RBP9.43□□□□□ -0.9
SEC16A-206ENST00000431893 TNFRSF14Q92956 283 aa9.43□□□□□ -0.9
SEC16A-206ENST00000431893 ZNF236Q9UL36 1845 aa9.42□□□□□ -0.9
SEC16A-206ENST00000431893 C9JAW5 83 aa9.42□□□□□ -0.9
SEC16A-206ENST00000431893 TMEM238C9JI98 176 aa9.42□□□□□ -0.9
SEC16A-206ENST00000431893 DUTP33316 252 aaKnown RBP9.42□□□□□ -0.9
SEC16A-206ENST00000431893 PRCDQ00LT1 54 aa9.42□□□□□ -0.9
SEC16A-206ENST00000431893 SPRR3Q9UBC9 169 aa9.42□□□□□ -0.9
SEC16A-206ENST00000431893 KIAA0100Q14667 2235 aaKnown RBP9.42□□□□□ -0.9
SEC16A-206ENST00000431893 PRSS57Q6UWY2 283 aa9.42□□□□□ -0.9
SEC16A-206ENST00000431893 C3orf79P0CE67 100 aa9.42□□□□□ -0.9
SEC16A-206ENST00000431893 MORN3Q6PF18 240 aaPredicted RBP9.42□□□□□ -0.9
SEC16A-206ENST00000431893 CFHR3Q02985 330 aa9.42□□□□□ -0.9
SEC16A-206ENST00000431893 ASPHD1Q5U4P2 390 aa9.42□□□□□ -0.9
SEC16A-206ENST00000431893 SUMO4Q6EEV6 95 aa9.42□□□□□ -0.9
SEC16A-206ENST00000431893 STPG4Q8N801 248 aa9.42□□□□□ -0.9
SEC16A-206ENST00000431893 C1orf159Q96HA4 380 aa9.42□□□□□ -0.9
SEC16A-206ENST00000431893 ZNF581Q9P0T4 197 aa9.42□□□□□ -0.9
SEC16A-206ENST00000431893 GGTLC1Q9BX51 225 aa9.41□□□□□ -0.9
SEC16A-206ENST00000431893 METRNQ9UJH8 293 aa9.41□□□□□ -0.9
SEC16A-206ENST00000431893 CHD5Q8TDI0 1954 aa9.41□□□□□ -0.9
SEC16A-206ENST00000431893 POLR2AP24928 1970 aaKnown RBP9.41□□□□□ -0.9
SEC16A-206ENST00000431893 FGF16O43320 207 aa9.41□□□□□ -0.9
SEC16A-206ENST00000431893 C15orf32Q32M92 178 aa9.41□□□□□ -0.9
SEC16A-206ENST00000431893 TEX43Q6ZNM6 134 aa9.41□□□□□ -0.9
SEC16A-206ENST00000431893 MBNL3Q9NUK0 354 aaKnown RBP9.41□□□□□ -0.9
SEC16A-206ENST00000431893 SRRM4A7MD48 611 aaKnown RBP9.41□□□□□ -0.9
SEC16A-206ENST00000431893 HAPLN4Q86UW8 402 aa9.41□□□□□ -0.9
SEC16A-206ENST00000431893 UNC13CQ8NB66 2214 aa9.41□□□□□ -0.9
SEC16A-206ENST00000431893 DUSP14O95147 198 aaKnown RBP9.41□□□□□ -0.9
SEC16A-206ENST00000431893 LINC00114Q6XXX2 140 aa9.41□□□□□ -0.9
SEC16A-206ENST00000431893 RNF144BQ7Z419 303 aa9.41□□□□□ -0.9
SEC16A-206ENST00000431893 EREGO14944 169 aa9.4□□□□□ -0.9
SEC16A-206ENST00000431893 FOXG1P55316 489 aaPredicted RBP9.4□□□□□ -0.9
SEC16A-206ENST00000431893 DLX4Q92988 240 aaPredicted RBP9.4□□□□□ -0.9
SEC16A-206ENST00000431893 CYTL1Q9NRR1 136 aa9.4□□□□□ -0.9
SEC16A-206ENST00000431893 F2Z2F3 143 aa9.4□□□□□ -0.9
SEC16A-206ENST00000431893 BRD3OSQ6XYD6 125 aa9.4□□□□□ -0.9
SEC16A-206ENST00000431893 PRADC1Q9BSG0 188 aa9.4□□□□□ -0.9
SEC16A-206ENST00000431893 PRSS22Q9GZN4 317 aa9.4□□□□□ -0.9
SEC16A-206ENST00000431893 MYOFQ9NZM1 2061 aa9.4□□□□□ -0.9
SEC16A-206ENST00000431893 IGKV1-12A0A0C4DH73 117 aa9.4□□□□□ -0.9
SEC16A-206ENST00000431893 A0A1W2PR77 199 aa9.4□□□□□ -0.9
SEC16A-206ENST00000431893 IGKV1D-12P01611 117 aa9.4□□□□□ -0.9
SEC16A-206ENST00000431893 TCF15Q12870 199 aa9.4□□□□□ -0.9
SEC16A-206ENST00000431893 FOXF2Q12947 444 aa9.4□□□□□ -0.9
SEC16A-206ENST00000431893 LY6DQ14210 128 aa9.4□□□□□ -0.9
SEC16A-206ENST00000431893 C1orf194Q5T5A4 169 aa9.4□□□□□ -0.9
SEC16A-206ENST00000431893 A0A087WX48 190 aa9.4□□□□□ -0.9
SEC16A-206ENST00000431893 THBDP07204 575 aa9.4□□□□□ -0.9
SEC16A-206ENST00000431893 AMN1Q8IY45 258 aa9.4□□□□□ -0.9
SEC16A-206ENST00000431893 DEFB121Q5J5C9 76 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms