RNA–Protein interactions for RNA: ENST00000423061.5

SYNE1-212, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE1, Length 27,436 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-212ENST00000423061 KIR2DL1P43626 348 aaPredicted RBP2.82□□□□□ -1.96
SYNE1-212ENST00000423061 ZNF818PQ6ZRF7 136 aa2.82□□□□□ -1.96
SYNE1-212ENST00000423061 IFI27L1Q96BM0 104 aa2.82□□□□□ -1.96
SYNE1-212ENST00000423061 CHCHD1Q96BP2 118 aaKnown RBP2.82□□□□□ -1.96
SYNE1-212ENST00000423061 TANC1Q9C0D5 1861 aa2.82□□□□□ -1.96
SYNE1-212ENST00000423061 LTAP01374 205 aa2.82□□□□□ -1.96
SYNE1-212ENST00000423061 NPCDR1Q9BY65 106 aa2.82□□□□□ -1.96
SYNE1-212ENST00000423061 NDUFA7O95182 113 aa2.82□□□□□ -1.96
SYNE1-212ENST00000423061 MRPS21P82921 87 aaKnown RBP2.82□□□□□ -1.96
SYNE1-212ENST00000423061 IDI2-AS1Q9NZ38 188 aa2.82□□□□□ -1.96
SYNE1-212ENST00000423061 J3QT63 122 aa2.82□□□□□ -1.96
SYNE1-212ENST00000423061 FAM19A5Q7Z5A7 132 aaPredicted RBP2.82□□□□□ -1.96
SYNE1-212ENST00000423061 FGFRL1Q8N441 504 aa2.82□□□□□ -1.96
SYNE1-212ENST00000423061 ZNF407Q9C0G0 2248 aa2.82□□□□□ -1.96
SYNE1-212ENST00000423061 TRAV13-1A0A0B4J241 112 aa2.82□□□□□ -1.96
SYNE1-212ENST00000423061 GFERP55789 205 aa2.82□□□□□ -1.96
SYNE1-212ENST00000423061 S100A7L2Q5SY68 101 aa2.82□□□□□ -1.96
SYNE1-212ENST00000423061 WFDC11Q8NEX6 87 aa2.82□□□□□ -1.96
SYNE1-212ENST00000423061 IGHV3-48P01763 117 aa2.82□□□□□ -1.96
SYNE1-212ENST00000423061 IFI27P40305 119 aaPredicted RBP2.82□□□□□ -1.96
SYNE1-212ENST00000423061 A0A096LPE4 126 aa2.82□□□□□ -1.96
SYNE1-212ENST00000423061 A0A1W2PPZ6 126 aa2.82□□□□□ -1.96
SYNE1-212ENST00000423061 GRPP07492 148 aa2.82□□□□□ -1.96
SYNE1-212ENST00000423061 RIF1Q5UIP0 2472 aaKnown RBP2.82□□□□□ -1.96
SYNE1-212ENST00000423061 FCGR3BO75015 233 aa2.82□□□□□ -1.96
SYNE1-212ENST00000423061 SP9P0CG40 484 aa2.82□□□□□ -1.96
SYNE1-212ENST00000423061 SPATA25Q9BR10 227 aa2.82□□□□□ -1.96
SYNE1-212ENST00000423061 V9GYV3 84 aa2.82□□□□□ -1.96
SYNE1-212ENST00000423061 IGFBP3P17936 291 aaPredicted RBP2.82□□□□□ -1.96
SYNE1-212ENST00000423061 Q6AWC8 147 aa2.82□□□□□ -1.96
SYNE1-212ENST00000423061 MDP1Q86V88 176 aa2.82□□□□□ -1.96
SYNE1-212ENST00000423061 GCSAMQ8N6F7 178 aa2.82□□□□□ -1.96
SYNE1-212ENST00000423061 IL36GQ9NZH8 169 aa2.82□□□□□ -1.96
SYNE1-212ENST00000423061 MOGAT3Q86VF5 341 aa2.82□□□□□ -1.96
SYNE1-212ENST00000423061 SRSF12Q8WXF0 261 aaKnown RBP2.82□□□□□ -1.96
SYNE1-212ENST00000423061 TICRRQ7Z2Z1 1910 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 CISD3P0C7P0 127 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 ZIC1Q15915 447 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 PLXNB3Q9ULL4 1909 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 IGLV1-36A0A0B4J1U3 117 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 PEX7O00628 323 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 KLF5Q13887 457 aaPredicted RBP2.81□□□□□ -1.96
SYNE1-212ENST00000423061 LAMTOR3Q9UHA4 124 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 CIRBPQ14011 172 aaKnown RBP2.81□□□□□ -1.96
SYNE1-212ENST00000423061 TMEM52Q8NDY8 209 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 DKK2Q9UBU2 259 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 RNF152Q8N8N0 203 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 PPP1R27Q86WC6 154 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 PRNDQ9UKY0 176 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 LHFPL6Q9Y693 200 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 C3orf22Q8N5N4 141 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 CFHR4Q92496 578 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 KLK15Q9H2R5 256 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 OR13A1Q8NGR1 328 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 MYOZ3Q8TDC0 251 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 PLPPR2Q96GM1 343 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 DOCK10Q96BY6 2186 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 NPFFO15130 113 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 CBLN3Q6UW01 205 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 NLRC5Q86WI3 1866 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 ANKHD1Q8IWZ3 2542 aaKnown RBP2.81□□□□□ -1.96
SYNE1-212ENST00000423061 LMO7DNF2Z398 122 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 RASL11BQ9BPW5 248 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 CHD3Q12873 2000 aaKnown RBP2.81□□□□□ -1.96
SYNE1-212ENST00000423061 RBAKDNA6NC62 111 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 PEAR1Q5VY43 1037 aaPredicted RBP2.81□□□□□ -1.96
SYNE1-212ENST00000423061 ZFP2Q6ZN57 461 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 REPIN1Q9BWE0 567 aaKnown RBP2.81□□□□□ -1.96
SYNE1-212ENST00000423061 C21orf62Q9NYP8 219 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 KLF13Q9Y2Y9 288 aaPredicted RBP2.81□□□□□ -1.96
SYNE1-212ENST00000423061 H0Y8X5 98 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 LOXL3P58215 753 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 LRRC75A-AS1Q8N1F1 130 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 TMEM101Q96IK0 257 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 LIME1Q9H400 295 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 RPP21Q9H633 154 aaKnown RBP2.81□□□□□ -1.96
SYNE1-212ENST00000423061 DSCR4P56555 118 aaPredicted RBP2.81□□□□□ -1.96
SYNE1-212ENST00000423061 VKORC1L1Q8N0U8 176 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 SAA2-SAA4A0A096LPE2 208 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 DXOO77932 396 aaKnown RBP2.81□□□□□ -1.96
SYNE1-212ENST00000423061 CT62P0C5K7 136 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 CIARTQ8N365 385 aaPredicted RBP2.81□□□□□ -1.96
SYNE1-212ENST00000423061 MOSP00540 346 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 COX14Q96I36 57 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 TNRC6AQ8NDV7 1962 aaKnown RBP2.81□□□□□ -1.96
SYNE1-212ENST00000423061 C2orf82Q6UX34 121 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 OR10J6PQ8NGY7 276 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 SMKR1H3BMG3 65 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 GGTLC3B5MD39 225 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 FAM90A26D6RGX4 464 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 IGKV1D-33P01593 117 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 IGKV1-33P01594 117 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 FNDC7Q5VTL7 733 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 PCSK4Q6UW60 755 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 RSPO2Q6UXX9 243 aaPredicted RBP2.81□□□□□ -1.96
SYNE1-212ENST00000423061 C2orf91Q6ZV80 131 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 E9PLD3 99 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 IGLC6P0CF74 106 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 A0A1W2PQD3 144 aa2.81□□□□□ -1.96
SYNE1-212ENST00000423061 NPIPB6E9PJ23 425 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms