RNA–Protein interactions for RNA: ENST00000423048.5

ALMS1-201, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 1 (best)

Gene ALMS1, Length 5,194 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-201ENST00000423048 UBE2E1P51965 193 aa5.84□□□□□ -1.47
ALMS1-201ENST00000423048 ZNF415Q09FC8 603 aa5.84□□□□□ -1.47
ALMS1-201ENST00000423048 PLA2G2CQ5R387 149 aa5.84□□□□□ -1.47
ALMS1-201ENST00000423048 IFI27L1Q96BM0 104 aa5.84□□□□□ -1.47
ALMS1-201ENST00000423048 SSBP4Q9BWG4 385 aaPredicted RBP5.84□□□□□ -1.47
ALMS1-201ENST00000423048 SPRR3Q9UBC9 169 aa5.84□□□□□ -1.47
ALMS1-201ENST00000423048 HLA-DRB4X5D2U9 266 aa5.84□□□□□ -1.47
ALMS1-201ENST00000423048 DENND4AQ7Z401 1863 aa5.84□□□□□ -1.47
ALMS1-201ENST00000423048 A0A1W2PR80 420 aa5.84□□□□□ -1.47
ALMS1-201ENST00000423048 LYPD6Q86Y78 171 aa5.84□□□□□ -1.47
ALMS1-201ENST00000423048 DKK1O94907 266 aa5.84□□□□□ -1.47
ALMS1-201ENST00000423048 DNAL4O96015 105 aa5.84□□□□□ -1.47
ALMS1-201ENST00000423048 LINC00469Q8N7U9 141 aa5.84□□□□□ -1.47
ALMS1-201ENST00000423048 RASL10AQ92737 203 aa5.84□□□□□ -1.47
ALMS1-201ENST00000423048 RNF166Q96A37 237 aaPredicted RBP5.84□□□□□ -1.47
ALMS1-201ENST00000423048 DUX5Q96PT3 197 aa5.84□□□□□ -1.47
ALMS1-201ENST00000423048 NDUFA4L2Q9NRX3 87 aa5.84□□□□□ -1.47
ALMS1-201ENST00000423048 IGHV1-3A0A0C4DH29 117 aa5.84□□□□□ -1.48
ALMS1-201ENST00000423048 DMRTC2Q8IXT2 367 aaPredicted RBP5.84□□□□□ -1.48
ALMS1-201ENST00000423048 MGST2Q99735 147 aa5.84□□□□□ -1.48
ALMS1-201ENST00000423048 IL17BQ9UHF5 180 aa5.84□□□□□ -1.48
ALMS1-201ENST00000423048 SMIM27A0A1W2PRY6 76 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 B4DSR2 109 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 MST1LQ2TV78 715 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 RPL39P5Q59GN2 51 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 SPINK9Q5DT21 86 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 OCC1Q8TAD7 63 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 DEPPQ9NTK1 212 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 PATE3B3GLJ2 98 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 BUB1B-PAK6H3BSN5 160 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 M0R381 172 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 HGFACQ04756 655 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 PAX8Q06710 450 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 NRTNQ99748 197 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 MEGF9Q9H1U4 602 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 SIGLEC9Q9Y336 463 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 SERF1AO75920 110 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 ADMP35318 185 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 ATP5G3P48201 142 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 DNAJC30Q96LL9 226 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 IGKV1-27A0A075B6S5 117 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 TRAV41A0A0B4J266 112 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 IGKV1D-33P01593 117 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 IGKV1-33P01594 117 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 IGHV2-5P01817 119 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 CSN3P07498 182 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 CBLN1P23435 193 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 ZNF672Q499Z4 452 aaPredicted RBP5.83□□□□□ -1.48
ALMS1-201ENST00000423048 KLF17Q5JT82 389 aaPredicted RBP5.83□□□□□ -1.48
ALMS1-201ENST00000423048 Q86TA4 180 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 RPP25LQ8N5L8 163 aaKnown RBP5.83□□□□□ -1.48
ALMS1-201ENST00000423048 RNF182Q8N6D2 247 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 LINC00574Q9H8X3 128 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 ZNF319Q9P2F9 582 aa5.83□□□□□ -1.48
ALMS1-201ENST00000423048 KIAA0100Q14667 2235 aaKnown RBP5.83□□□□□ -1.48
ALMS1-201ENST00000423048 NDUFA4O00483 81 aa5.82□□□□□ -1.48
ALMS1-201ENST00000423048 ESDP10768 282 aa5.82□□□□□ -1.48
ALMS1-201ENST00000423048 TTC32Q5I0X7 151 aa5.82□□□□□ -1.48
ALMS1-201ENST00000423048 SIGLEC15Q6ZMC9 328 aa5.82□□□□□ -1.48
ALMS1-201ENST00000423048 GLMPQ8WWB7 406 aa5.82□□□□□ -1.48
ALMS1-201ENST00000423048 MSRB2Q9Y3D2 182 aa5.82□□□□□ -1.48
ALMS1-201ENST00000423048 FAM181BA6NEQ2 426 aa5.82□□□□□ -1.48
ALMS1-201ENST00000423048 SLAQ13239 276 aa5.82□□□□□ -1.48
ALMS1-201ENST00000423048 CKAP5Q14008 2032 aa5.82□□□□□ -1.48
ALMS1-201ENST00000423048 RHOHQ15669 191 aa5.82□□□□□ -1.48
ALMS1-201ENST00000423048 HAPLN4Q86UW8 402 aa5.82□□□□□ -1.48
ALMS1-201ENST00000423048 LIME1Q9H400 295 aa5.82□□□□□ -1.48
ALMS1-201ENST00000423048 ATP5J2P56134 94 aa5.82□□□□□ -1.48
ALMS1-201ENST00000423048 ZNF329Q86UD4 541 aa5.82□□□□□ -1.48
ALMS1-201ENST00000423048 DMRTA2Q96SC8 542 aa5.82□□□□□ -1.48
ALMS1-201ENST00000423048 FOXC2Q99958 501 aa5.82□□□□□ -1.48
ALMS1-201ENST00000423048 MLNRO43193 412 aa5.82□□□□□ -1.48
ALMS1-201ENST00000423048 SRSF6Q13247 344 aaKnown RBP5.82□□□□□ -1.48
ALMS1-201ENST00000423048 HCP5Q6MZN7 132 aa5.82□□□□□ -1.48
ALMS1-201ENST00000423048 TRPT1Q86TN4 253 aaKnown RBP5.82□□□□□ -1.48
ALMS1-201ENST00000423048 Q8N8P6 123 aa5.82□□□□□ -1.48
ALMS1-201ENST00000423048 MCRIP2Q9BUT9 160 aaKnown RBP5.82□□□□□ -1.48
ALMS1-201ENST00000423048 ATXN8Q156A1 80 aa5.81□□□□□ -1.48
ALMS1-201ENST00000423048 FBXL19-AS1Q494R0 122 aa5.81□□□□□ -1.48
ALMS1-201ENST00000423048 COQ2Q96H96 371 aa5.81□□□□□ -1.48
ALMS1-201ENST00000423048 MEX3AA1L020 520 aaKnown RBP5.81□□□□□ -1.48
ALMS1-201ENST00000423048 NPSP0C0P6 89 aa5.81□□□□□ -1.48
ALMS1-201ENST00000423048 SH2D6Q7Z4S9 175 aa5.81□□□□□ -1.48
ALMS1-201ENST00000423048 TRIOBPQ9H2D6 2365 aa5.81□□□□□ -1.48
ALMS1-201ENST00000423048 PIP4P1Q86T03 277 aa5.81□□□□□ -1.48
ALMS1-201ENST00000423048 FBXL15Q9H469 300 aa5.81□□□□□ -1.48
ALMS1-201ENST00000423048 ANAPC1Q9H1A4 1944 aa5.81□□□□□ -1.48
ALMS1-201ENST00000423048 H3BRN7 92 aa5.81□□□□□ -1.48
ALMS1-201ENST00000423048 DLEU1O43261 78 aa5.81□□□□□ -1.48
ALMS1-201ENST00000423048 CNTFRP26992 372 aa5.81□□□□□ -1.48
ALMS1-201ENST00000423048 ZNF137PP52743 207 aa5.81□□□□□ -1.48
ALMS1-201ENST00000423048 TMEM86BQ8N661 226 aa5.81□□□□□ -1.48
ALMS1-201ENST00000423048 CD177Q8N6Q3 437 aa5.81□□□□□ -1.48
ALMS1-201ENST00000423048 ZNRF1Q8ND25 227 aa5.81□□□□□ -1.48
ALMS1-201ENST00000423048 OR2K2Q8NGT1 345 aa5.81□□□□□ -1.48
ALMS1-201ENST00000423048 SPCS1Q9Y6A9 102 aa5.81□□□□□ -1.48
ALMS1-201ENST00000423048 LOC102724200A0A096LPH7 203 aaPredicted RBP5.8□□□□□ -1.48
ALMS1-201ENST00000423048 HOXA3O43365 443 aaPredicted RBP5.8□□□□□ -1.48
ALMS1-201ENST00000423048 PRSS2P07478 247 aa5.8□□□□□ -1.48
ALMS1-201ENST00000423048 TMEM200BQ69YZ2 307 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms