RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 C11orf45Q8TAV5 145 aa18.52■□□□□ 0.56
VEGFA-208ENST00000417285 DCANP1Q8TF63 244 aa18.52■□□□□ 0.56
VEGFA-208ENST00000417285 SLC35E1Q96K37 410 aa18.52■□□□□ 0.56
VEGFA-208ENST00000417285 FAM90A26D6RGX4 464 aa18.51■□□□□ 0.55
VEGFA-208ENST00000417285 RAB11AP62491 216 aa18.51■□□□□ 0.55
VEGFA-208ENST00000417285 USF2Q15853 346 aaPredicted RBP18.51■□□□□ 0.55
VEGFA-208ENST00000417285 TRIQKQ629K1 86 aa18.51■□□□□ 0.55
VEGFA-208ENST00000417285 MORN3Q6PF18 240 aaPredicted RBP18.51■□□□□ 0.55
VEGFA-208ENST00000417285 GLMPQ8WWB7 406 aa18.51■□□□□ 0.55
VEGFA-208ENST00000417285 MED6O75586 246 aa18.5■□□□□ 0.55
VEGFA-208ENST00000417285 SPP1P10451 314 aa18.5■□□□□ 0.55
VEGFA-208ENST00000417285 PSG1P11464 419 aa18.5■□□□□ 0.55
VEGFA-208ENST00000417285 UBE2MP61081 183 aaKnown RBP18.5■□□□□ 0.55
VEGFA-208ENST00000417285 NAP1L6A6NFF2 107 aa18.49■□□□□ 0.55
VEGFA-208ENST00000417285 ZNF688P0C7X2 276 aa18.49■□□□□ 0.55
VEGFA-208ENST00000417285 IAPPP10997 89 aa18.49■□□□□ 0.55
VEGFA-208ENST00000417285 DHRS2Q13268 280 aa18.49■□□□□ 0.55
VEGFA-208ENST00000417285 TRPT1Q86TN4 253 aaKnown RBP18.49■□□□□ 0.55
VEGFA-208ENST00000417285 OR51G1Q8NGK1 321 aa18.49■□□□□ 0.55
VEGFA-208ENST00000417285 ZFP92A6NM28 416 aa18.48■□□□□ 0.55
VEGFA-208ENST00000417285 RPP30P78346 268 aaKnown RBP18.48■□□□□ 0.55
VEGFA-208ENST00000417285 GAMTQ14353 236 aa18.48■□□□□ 0.55
VEGFA-208ENST00000417285 CIB3Q96Q77 187 aaPredicted RBP18.48■□□□□ 0.55
VEGFA-208ENST00000417285 SEPSECSQ9HD40 501 aaKnown RBP18.48■□□□□ 0.55
VEGFA-208ENST00000417285 PFDN2Q9UHV9 154 aa18.48■□□□□ 0.55
VEGFA-208ENST00000417285 FABP1P07148 127 aa18.47■□□□□ 0.55
VEGFA-208ENST00000417285 HOXB5P09067 269 aa18.47■□□□□ 0.55
VEGFA-208ENST00000417285 NUP62P37198 522 aaPredicted RBP18.47■□□□□ 0.55
VEGFA-208ENST00000417285 RNF125Q96EQ8 232 aa18.47■□□□□ 0.55
VEGFA-208ENST00000417285 PAIP2BQ9ULR5 123 aaKnown RBP18.47■□□□□ 0.55
VEGFA-208ENST00000417285 BIRC6Q9NR09 4857 aa18.47■□□□□ 0.55
VEGFA-208ENST00000417285 BUB3O43684 328 aa18.46■□□□□ 0.55
VEGFA-208ENST00000417285 NANOS2P60321 138 aaKnown RBP18.46■□□□□ 0.55
VEGFA-208ENST00000417285 BAK1Q16611 211 aa18.46■□□□□ 0.55
VEGFA-208ENST00000417285 SIGLEC15Q6ZMC9 328 aa18.46■□□□□ 0.55
VEGFA-208ENST00000417285 KNCNA6PVL3 124 aa18.45■□□□□ 0.54
VEGFA-208ENST00000417285 SYNGR2O43760 224 aa18.45■□□□□ 0.54
VEGFA-208ENST00000417285 NDUFB6O95139 128 aa18.45■□□□□ 0.54
VEGFA-208ENST00000417285 GIG44P09565 113 aaPredicted RBP18.45■□□□□ 0.54
VEGFA-208ENST00000417285 SNRPD3P62318 126 aaKnown RBP18.45■□□□□ 0.54
VEGFA-208ENST00000417285 ACTL10Q5JWF8 245 aa18.45■□□□□ 0.54
VEGFA-208ENST00000417285 GGNBP1Q5YKI7 109 aa18.45■□□□□ 0.54
VEGFA-208ENST00000417285 OR8G2PQ6IF36 304 aa18.45■□□□□ 0.54
VEGFA-208ENST00000417285 RAB40CQ96S21 281 aa18.45■□□□□ 0.54
VEGFA-208ENST00000417285 PBDC1Q9BVG4 233 aa18.45■□□□□ 0.54
VEGFA-208ENST00000417285 CENPXA8MT69 81 aa18.44■□□□□ 0.54
VEGFA-208ENST00000417285 LGALS9CQ6DKI2 356 aa18.44■□□□□ 0.54
VEGFA-208ENST00000417285 MAGT1Q9H0U3 335 aa18.44■□□□□ 0.54
VEGFA-208ENST00000417285 NRN1Q9NPD7 142 aa18.44■□□□□ 0.54
VEGFA-208ENST00000417285 FBXL17Q9UF56 701 aa18.44■□□□□ 0.54
VEGFA-208ENST00000417285 IGKV1D-37A0A075B6S9 117 aa18.43■□□□□ 0.54
VEGFA-208ENST00000417285 C9orf170A2RU37 121 aa18.43■□□□□ 0.54
VEGFA-208ENST00000417285 MIFP14174 115 aa18.43■□□□□ 0.54
VEGFA-208ENST00000417285 TCTAP57738 103 aa18.43■□□□□ 0.54
VEGFA-208ENST00000417285 ZNF90Q03938 601 aa18.43■□□□□ 0.54
VEGFA-208ENST00000417285 PSMG4Q5JS54 123 aa18.43■□□□□ 0.54
VEGFA-208ENST00000417285 HRH4Q9H3N8 390 aa18.43■□□□□ 0.54
VEGFA-208ENST00000417285 WRBO00258 174 aa18.42■□□□□ 0.54
VEGFA-208ENST00000417285 DEFB4AO15263 64 aa18.42■□□□□ 0.54
VEGFA-208ENST00000417285 COQ8AQ8NI60 647 aa18.42■□□□□ 0.54
VEGFA-208ENST00000417285 C2CD4CQ8TF44 421 aa18.42■□□□□ 0.54
VEGFA-208ENST00000417285 TRGV9Q99603 122 aa18.42■□□□□ 0.54
VEGFA-208ENST00000417285 LINC00854A0A1B0GVQ3 168 aa18.41■□□□□ 0.54
VEGFA-208ENST00000417285 SNRPGP15A8MWD9 76 aa18.41■□□□□ 0.54
VEGFA-208ENST00000417285 LYZP61626 148 aa18.41■□□□□ 0.54
VEGFA-208ENST00000417285 NUTF2P61970 127 aaKnown RBP18.41■□□□□ 0.54
VEGFA-208ENST00000417285 Q8NAQ8 132 aa18.41■□□□□ 0.54
VEGFA-208ENST00000417285 C7orf50Q9BRJ6 194 aaKnown RBP18.41■□□□□ 0.54
VEGFA-208ENST00000417285 ZNF705EA8MWA4 302 aaPredicted RBP18.4■□□□□ 0.54
VEGFA-208ENST00000417285 C11orf94C9JXX5 98 aa18.4■□□□□ 0.54
VEGFA-208ENST00000417285 SDHCQ99643 169 aaPredicted RBP18.4■□□□□ 0.54
VEGFA-208ENST00000417285 C1QTNF4Q9BXJ3 329 aa18.4■□□□□ 0.54
VEGFA-208ENST00000417285 FLVCR2Q9UPI3 526 aa18.4■□□□□ 0.54
VEGFA-208ENST00000417285 ADAP1O75689 374 aa18.39■□□□□ 0.53
VEGFA-208ENST00000417285 IFNA21P01568 189 aa18.39■□□□□ 0.53
VEGFA-208ENST00000417285 OR4E1P0C645 316 aa18.39■□□□□ 0.53
VEGFA-208ENST00000417285 SPANXN5Q5MJ07 72 aa18.39■□□□□ 0.53
VEGFA-208ENST00000417285 THAP8Q8NA92 274 aa18.39■□□□□ 0.53
VEGFA-208ENST00000417285 NDUFA13Q9P0J0 144 aa18.39■□□□□ 0.53
VEGFA-208ENST00000417285 AGRNO00468 2067 aa18.38■□□□□ 0.53
VEGFA-208ENST00000417285 IGHV4-28A0A0C4DH34 117 aa18.38■□□□□ 0.53
VEGFA-208ENST00000417285 CFDP00746 253 aaPredicted RBP18.38■□□□□ 0.53
VEGFA-208ENST00000417285 C4BPBP20851 252 aa18.38■□□□□ 0.53
VEGFA-208ENST00000417285 OR2F1Q13607 317 aa18.38■□□□□ 0.53
VEGFA-208ENST00000417285 C1orf194Q5T5A4 169 aa18.38■□□□□ 0.53
VEGFA-208ENST00000417285 CSNK1G2-AS1Q8NCQ2 148 aa18.38■□□□□ 0.53
VEGFA-208ENST00000417285 PPP1R14BQ96C90 147 aa18.38■□□□□ 0.53
VEGFA-208ENST00000417285 TBC1D24Q9ULP9 559 aa18.38■□□□□ 0.53
VEGFA-208ENST00000417285 STRAPQ9Y3F4 350 aaKnown RBP18.38■□□□□ 0.53
VEGFA-208ENST00000417285 PRSS46E5RG02 174 aa18.37■□□□□ 0.53
VEGFA-208ENST00000417285 RBMY1A1P0DJD3 496 aaKnown RBP18.37■□□□□ 0.53
VEGFA-208ENST00000417285 RBMY1CP0DJD4 496 aa18.37■□□□□ 0.53
VEGFA-208ENST00000417285 IL7P13232 177 aa18.37■□□□□ 0.53
VEGFA-208ENST00000417285 RBMY1FQ15415 496 aaKnown RBP18.37■□□□□ 0.53
VEGFA-208ENST00000417285 C4orf46Q504U0 113 aa18.37■□□□□ 0.53
VEGFA-208ENST00000417285 X6R8D5 127 aa18.37■□□□□ 0.53
VEGFA-208ENST00000417285 IGKV1OR2-108A0A075B7D4 117 aa18.36■□□□□ 0.53
VEGFA-208ENST00000417285 H3BMM0 161 aa18.36■□□□□ 0.53
VEGFA-208ENST00000417285 H3BP45 60 aa18.36■□□□□ 0.53
VEGFA-208ENST00000417285 BTCP35070 178 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms