RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 TBC1D24Q9ULP9 559 aa13.96□□□□□ -0.17
TRIM56-202ENST00000412507 PRSS46E5RG02 174 aa13.95□□□□□ -0.18
TRIM56-202ENST00000412507 C3orf84H3BNL1 204 aa13.95□□□□□ -0.18
TRIM56-202ENST00000412507 CMC4P56277 68 aaPredicted RBP13.95□□□□□ -0.18
TRIM56-202ENST00000412507 IFITM3Q01628 133 aa13.95□□□□□ -0.18
TRIM56-202ENST00000412507 ZNF90Q03938 601 aa13.95□□□□□ -0.18
TRIM56-202ENST00000412507 IAH1Q2TAA2 248 aaPredicted RBP13.95□□□□□ -0.18
TRIM56-202ENST00000412507 STXBP6Q8NFX7 210 aa13.95□□□□□ -0.18
TRIM56-202ENST00000412507 OR51G1Q8NGK1 321 aa13.95□□□□□ -0.18
TRIM56-202ENST00000412507 GRAMD2BQ96HH9 432 aa13.95□□□□□ -0.18
TRIM56-202ENST00000412507 SEC22CQ9BRL7 303 aa13.95□□□□□ -0.18
TRIM56-202ENST00000412507 STRAPQ9Y3F4 350 aaKnown RBP13.95□□□□□ -0.18
TRIM56-202ENST00000412507 CSMD3Q7Z407 3707 aa13.95□□□□□ -0.18
TRIM56-202ENST00000412507 FAM240BA0A1B0GVZ2 78 aa13.94□□□□□ -0.18
TRIM56-202ENST00000412507 SSSCA1O60232 199 aa13.94□□□□□ -0.18
TRIM56-202ENST00000412507 SCGB1D2O95969 90 aa13.94□□□□□ -0.18
TRIM56-202ENST00000412507 H2AFB2P0C5Z0 115 aa13.94□□□□□ -0.18
TRIM56-202ENST00000412507 RPL35AP18077 110 aaKnown RBP13.94□□□□□ -0.18
TRIM56-202ENST00000412507 C16orf54Q6UWD8 224 aa13.94□□□□□ -0.18
TRIM56-202ENST00000412507 FAM24BQ8N5W8 94 aa13.94□□□□□ -0.18
TRIM56-202ENST00000412507 ZBTB8BQ8NAP8 495 aaPredicted RBP13.94□□□□□ -0.18
TRIM56-202ENST00000412507 RNF125Q96EQ8 232 aa13.94□□□□□ -0.18
TRIM56-202ENST00000412507 PSENENQ9NZ42 101 aa13.94□□□□□ -0.18
TRIM56-202ENST00000412507 GSKIPQ9P0R6 139 aa13.94□□□□□ -0.18
TRIM56-202ENST00000412507 KMT2CQ8NEZ4 4911 aaKnown RBP13.94□□□□□ -0.18
TRIM56-202ENST00000412507 TRAV2A0A0B4J234 112 aa13.93□□□□□ -0.18
TRIM56-202ENST00000412507 CCSO14618 274 aa13.93□□□□□ -0.18
TRIM56-202ENST00000412507 APOC4P55056 127 aa13.93□□□□□ -0.18
TRIM56-202ENST00000412507 ZNF431Q8TF32 576 aaPredicted RBP13.93□□□□□ -0.18
TRIM56-202ENST00000412507 GLMPQ8WWB7 406 aa13.93□□□□□ -0.18
TRIM56-202ENST00000412507 OVOL2Q9BRP0 275 aa13.93□□□□□ -0.18
TRIM56-202ENST00000412507 PBDC1Q9BVG4 233 aa13.93□□□□□ -0.18
TRIM56-202ENST00000412507 IGKV1OR2-108A0A075B7D4 117 aa13.92□□□□□ -0.18
TRIM56-202ENST00000412507 K7EQG2 157 aa13.92□□□□□ -0.18
TRIM56-202ENST00000412507 DEFB131AP59861 70 aa13.92□□□□□ -0.18
TRIM56-202ENST00000412507 OR2F1Q13607 317 aa13.92□□□□□ -0.18
TRIM56-202ENST00000412507 THAP8Q8NA92 274 aa13.92□□□□□ -0.18
TRIM56-202ENST00000412507 SMIM8Q96KF7 97 aa13.92□□□□□ -0.18
TRIM56-202ENST00000412507 TRGV9Q99603 122 aa13.92□□□□□ -0.18
TRIM56-202ENST00000412507 HELTA6NFD8 242 aa13.91□□□□□ -0.18
TRIM56-202ENST00000412507 FABP1P07148 127 aa13.91□□□□□ -0.18
TRIM56-202ENST00000412507 PAX9P55771 341 aa13.91□□□□□ -0.18
TRIM56-202ENST00000412507 LEMD1Q68G75 181 aa13.91□□□□□ -0.18
TRIM56-202ENST00000412507 KIR2DL5BA0A0G2JN68 375 aa13.9□□□□□ -0.18
TRIM56-202ENST00000412507 KIR2DL5BA0A0G2JPC4 375 aa13.9□□□□□ -0.18
TRIM56-202ENST00000412507 BUB3O43684 328 aa13.9□□□□□ -0.18
TRIM56-202ENST00000412507 PTTG1O95997 202 aa13.9□□□□□ -0.18
TRIM56-202ENST00000412507 LYL1P12980 280 aa13.9□□□□□ -0.18
TRIM56-202ENST00000412507 EIF2B2P49770 351 aaKnown RBP13.9□□□□□ -0.18
TRIM56-202ENST00000412507 LYZP61626 148 aa13.9□□□□□ -0.18
TRIM56-202ENST00000412507 RGS21Q2M5E4 152 aa13.9□□□□□ -0.18
TRIM56-202ENST00000412507 DEFB135Q30KP9 77 aa13.9□□□□□ -0.18
TRIM56-202ENST00000412507 CASC10Q5T4H9 136 aa13.9□□□□□ -0.18
TRIM56-202ENST00000412507 OR8G2PQ6IF36 304 aa13.9□□□□□ -0.18
TRIM56-202ENST00000412507 ACOT7LQ6ZUV0 252 aa13.9□□□□□ -0.18
TRIM56-202ENST00000412507 KIR2DL5AQ8N109 375 aa13.9□□□□□ -0.18
TRIM56-202ENST00000412507 C12orf45Q8N5I9 185 aaPredicted RBP13.9□□□□□ -0.18
TRIM56-202ENST00000412507 STPG3Q8N7X2 389 aa13.9□□□□□ -0.18
TRIM56-202ENST00000412507 KIR2DL5BQ8NHK3 375 aa13.9□□□□□ -0.18
TRIM56-202ENST00000412507 ENKURQ8TC29 256 aa13.9□□□□□ -0.18
TRIM56-202ENST00000412507 RCL1Q9Y2P8 373 aaKnown RBP13.9□□□□□ -0.18
TRIM56-202ENST00000412507 TENM2Q9NT68 2774 aa13.9□□□□□ -0.18
TRIM56-202ENST00000412507 STARD9Q9P2P6 4700 aa13.89□□□□□ -0.19
TRIM56-202ENST00000412507 PMS2P5A8MQ11 134 aa13.89□□□□□ -0.19
TRIM56-202ENST00000412507 FAM25EA8MYX2 175 aa13.89□□□□□ -0.19
TRIM56-202ENST00000412507 UBE2CO00762 179 aa13.89□□□□□ -0.19
TRIM56-202ENST00000412507 CCNKO75909 580 aa13.89□□□□□ -0.19
TRIM56-202ENST00000412507 AP2S1P53680 142 aaPredicted RBP13.89□□□□□ -0.19
TRIM56-202ENST00000412507 AKR1C1Q04828 323 aa13.89□□□□□ -0.19
TRIM56-202ENST00000412507 ZFAND6Q6FIF0 208 aa13.89□□□□□ -0.19
TRIM56-202ENST00000412507 DCANP1Q8TF63 244 aa13.89□□□□□ -0.19
TRIM56-202ENST00000412507 RAB40CQ96S21 281 aa13.89□□□□□ -0.19
TRIM56-202ENST00000412507 SNRPGP15A8MWD9 76 aa13.88□□□□□ -0.19
TRIM56-202ENST00000412507 MBPP02686 304 aaPredicted RBP13.88□□□□□ -0.19
TRIM56-202ENST00000412507 ZNF688P0C7X2 276 aa13.88□□□□□ -0.19
TRIM56-202ENST00000412507 TMEM14EPQ6UXP3 125 aa13.88□□□□□ -0.19
TRIM56-202ENST00000412507 SIGLEC15Q6ZMC9 328 aa13.88□□□□□ -0.19
TRIM56-202ENST00000412507 Q6ZWC4 215 aa13.88□□□□□ -0.19
TRIM56-202ENST00000412507 SMCO3A2RU48 225 aa13.87□□□□□ -0.19
TRIM56-202ENST00000412507 C5orf51A6NDU8 294 aa13.87□□□□□ -0.19
TRIM56-202ENST00000412507 SPRY2O43597 315 aa13.87□□□□□ -0.19
TRIM56-202ENST00000412507 METTL15P1P0C7V9 234 aa13.87□□□□□ -0.19
TRIM56-202ENST00000412507 GATA2P23769 480 aaPredicted RBP13.87□□□□□ -0.19
TRIM56-202ENST00000412507 NUP62P37198 522 aaPredicted RBP13.87□□□□□ -0.19
TRIM56-202ENST00000412507 TP53TG1Q9Y2A0 90 aa13.87□□□□□ -0.19
TRIM56-202ENST00000412507 C7orf66A4D0T2 115 aa13.86□□□□□ -0.19
TRIM56-202ENST00000412507 TSC22D2O75157 780 aa13.86□□□□□ -0.19
TRIM56-202ENST00000412507 TAS2R30P59541 319 aa13.86□□□□□ -0.19
TRIM56-202ENST00000412507 RRAS2P62070 204 aaPredicted RBP13.86□□□□□ -0.19
TRIM56-202ENST00000412507 TMEM182Q6ZP80 229 aaPredicted RBP13.86□□□□□ -0.19
TRIM56-202ENST00000412507 TMEM144Q7Z5S9 345 aa13.86□□□□□ -0.19
TRIM56-202ENST00000412507 PPP1R14BQ96C90 147 aa13.86□□□□□ -0.19
TRIM56-202ENST00000412507 RNF183Q96D59 192 aa13.86□□□□□ -0.19
TRIM56-202ENST00000412507 CSTL1Q9H114 145 aa13.86□□□□□ -0.19
TRIM56-202ENST00000412507 NRN1Q9NPD7 142 aa13.86□□□□□ -0.19
TRIM56-202ENST00000412507 PFDN2Q9UHV9 154 aa13.86□□□□□ -0.19
TRIM56-202ENST00000412507 LSM5Q9Y4Y9 91 aaKnown RBP13.86□□□□□ -0.19
TRIM56-202ENST00000412507 IL5P05113 134 aa13.85□□□□□ -0.19
TRIM56-202ENST00000412507 NRARPQ7Z6K4 114 aa13.85□□□□□ -0.19
TRIM56-202ENST00000412507 BPIFCQ8NFQ6 507 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms