RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 IBA57Q5T440 356 aaKnown RBP7.32□□□□□ -1.24
LIG4-202ENST00000405925 C8orf46Q8TAG6 207 aa7.32□□□□□ -1.24
LIG4-202ENST00000405925 IGHV3OR16-12A0A075B7B8 117 aa7.32□□□□□ -1.24
LIG4-202ENST00000405925 G3V318 75 aa7.32□□□□□ -1.24
LIG4-202ENST00000405925 SNRPD3P62318 126 aaKnown RBP7.32□□□□□ -1.24
LIG4-202ENST00000405925 TMEM249Q2WGJ8 235 aa7.32□□□□□ -1.24
LIG4-202ENST00000405925 ZNF506Q5JVG8 444 aa7.32□□□□□ -1.24
LIG4-202ENST00000405925 TCEAL7Q9BRU2 100 aa7.32□□□□□ -1.24
LIG4-202ENST00000405925 C20orf202A1L168 122 aa7.32□□□□□ -1.24
LIG4-202ENST00000405925 FAM74A7A6NL05 159 aa7.32□□□□□ -1.24
LIG4-202ENST00000405925 A8MWL6 223 aa7.32□□□□□ -1.24
LIG4-202ENST00000405925 CENPWQ5EE01 88 aa7.32□□□□□ -1.24
LIG4-202ENST00000405925 C1orf122Q6ZSJ8 110 aa7.32□□□□□ -1.24
LIG4-202ENST00000405925 MGST2Q99735 147 aa7.32□□□□□ -1.24
LIG4-202ENST00000405925 SCO2A0A1W2PP80 73 aa7.31□□□□□ -1.24
LIG4-202ENST00000405925 J3QLI3 93 aa7.31□□□□□ -1.24
LIG4-202ENST00000405925 MDKP21741 143 aaPredicted RBP7.31□□□□□ -1.24
LIG4-202ENST00000405925 RPP25LQ8N5L8 163 aaKnown RBP7.31□□□□□ -1.24
LIG4-202ENST00000405925 DOPEY1Q5JWR5 2465 aa7.31□□□□□ -1.24
LIG4-202ENST00000405925 XIRP2A4UGR9 3374 aa7.31□□□□□ -1.24
LIG4-202ENST00000405925 TRAV5A0A0B4J249 113 aa7.31□□□□□ -1.24
LIG4-202ENST00000405925 IER3P46695 156 aa7.31□□□□□ -1.24
LIG4-202ENST00000405925 CCL20P78556 96 aa7.31□□□□□ -1.24
LIG4-202ENST00000405925 AARDQ4LEZ3 155 aa7.31□□□□□ -1.24
LIG4-202ENST00000405925 CRIP3Q6Q6R5 217 aa7.31□□□□□ -1.24
LIG4-202ENST00000405925 PRB4P10163 310 aaPredicted RBP7.31□□□□□ -1.24
LIG4-202ENST00000405925 HOXB4P17483 251 aaPredicted RBP7.31□□□□□ -1.24
LIG4-202ENST00000405925 FAM3BP58499 235 aaPredicted RBP7.31□□□□□ -1.24
LIG4-202ENST00000405925 SPANXN1Q5VSR9 72 aa7.31□□□□□ -1.24
LIG4-202ENST00000405925 C19orf35Q6ZS72 473 aa7.31□□□□□ -1.24
LIG4-202ENST00000405925 ELOVL1Q9BW60 279 aa7.31□□□□□ -1.24
LIG4-202ENST00000405925 NDUFA4L2Q9NRX3 87 aa7.31□□□□□ -1.24
LIG4-202ENST00000405925 ARHGAP32A7KAX9 2087 aa7.3□□□□□ -1.24
LIG4-202ENST00000405925 TMEM189A5PLL7 270 aa7.3□□□□□ -1.24
LIG4-202ENST00000405925 SNURFLB1AK76 121 aa7.3□□□□□ -1.24
LIG4-202ENST00000405925 PLXNB1O43157 2135 aa7.3□□□□□ -1.24
LIG4-202ENST00000405925 CSN3P07498 182 aa7.3□□□□□ -1.24
LIG4-202ENST00000405925 FABP4P15090 132 aa7.3□□□□□ -1.24
LIG4-202ENST00000405925 ZFP36P26651 326 aaKnown RBP7.3□□□□□ -1.24
LIG4-202ENST00000405925 WT1-ASQ06250 92 aa7.3□□□□□ -1.24
LIG4-202ENST00000405925 RIGQ13278 110 aa7.3□□□□□ -1.24
LIG4-202ENST00000405925 TEX38Q6PEX7 206 aa7.3□□□□□ -1.24
LIG4-202ENST00000405925 FA2HQ7L5A8 372 aa7.3□□□□□ -1.24
LIG4-202ENST00000405925 HIST1H2BAQ96A08 127 aa7.3□□□□□ -1.24
LIG4-202ENST00000405925 Q9H3A6 140 aa7.3□□□□□ -1.24
LIG4-202ENST00000405925 PEX7O00628 323 aa7.3□□□□□ -1.24
LIG4-202ENST00000405925 GPX1P07203 203 aa7.3□□□□□ -1.24
LIG4-202ENST00000405925 PAX9P55771 341 aa7.3□□□□□ -1.24
LIG4-202ENST00000405925 NSUN5P1Q3KNT7 163 aa7.3□□□□□ -1.24
LIG4-202ENST00000405925 SPATA31B1PQ5VZV4 182 aa7.3□□□□□ -1.24
LIG4-202ENST00000405925 WDR73Q6P4I2 378 aa7.3□□□□□ -1.24
LIG4-202ENST00000405925 SEPSECSQ9HD40 501 aaKnown RBP7.3□□□□□ -1.24
LIG4-202ENST00000405925 SZT2Q5T011 3432 aa7.3□□□□□ -1.24
LIG4-202ENST00000405925 SRP19P09132 144 aaKnown RBP7.3□□□□□ -1.24
LIG4-202ENST00000405925 IGHV4-38-2P0DP08 117 aa7.3□□□□□ -1.24
LIG4-202ENST00000405925 CD81P60033 236 aa7.3□□□□□ -1.24
LIG4-202ENST00000405925 RPL15P61313 204 aaKnown RBP7.3□□□□□ -1.24
LIG4-202ENST00000405925 HIST2H2BCQ6DN03 193 aa7.3□□□□□ -1.24
LIG4-202ENST00000405925 NOL4LQ96MY1 436 aaPredicted RBP7.3□□□□□ -1.24
LIG4-202ENST00000405925 SCRT1Q9BWW7 348 aa7.3□□□□□ -1.24
LIG4-202ENST00000405925 PMCHP20382 165 aa7.29□□□□□ -1.24
LIG4-202ENST00000405925 FAM120AOSQ5T036 256 aa7.29□□□□□ -1.24
LIG4-202ENST00000405925 OR11H6Q8NGC7 330 aa7.29□□□□□ -1.24
LIG4-202ENST00000405925 ZNF292O60281 2723 aa7.29□□□□□ -1.24
LIG4-202ENST00000405925 GGCTO75223 188 aaKnown RBP7.29□□□□□ -1.24
LIG4-202ENST00000405925 LYL1P12980 280 aa7.29□□□□□ -1.24
LIG4-202ENST00000405925 DEFB112Q30KQ8 113 aa7.29□□□□□ -1.24
LIG4-202ENST00000405925 SIGLECL1Q8N7X8 197 aa7.29□□□□□ -1.24
LIG4-202ENST00000405925 PRSS3P2Q8NHM4 247 aa7.29□□□□□ -1.24
LIG4-202ENST00000405925 TRGV9Q99603 122 aa7.29□□□□□ -1.24
LIG4-202ENST00000405925 NCKAP5O14513 1909 aa7.29□□□□□ -1.24
LIG4-202ENST00000405925 PMS2P5A8MQ11 134 aa7.29□□□□□ -1.24
LIG4-202ENST00000405925 GNG5P63218 68 aa7.29□□□□□ -1.24
LIG4-202ENST00000405925 RNASEKQ6P5S7 137 aaKnown RBP7.29□□□□□ -1.24
LIG4-202ENST00000405925 DDB2Q92466 427 aa7.29□□□□□ -1.24
LIG4-202ENST00000405925 PEMTQ9UBM1 199 aa7.29□□□□□ -1.24
LIG4-202ENST00000405925 FGF16O43320 207 aa7.28□□□□□ -1.24
LIG4-202ENST00000405925 IGHV4-59P01825 116 aa7.28□□□□□ -1.24
LIG4-202ENST00000405925 RAB5AP20339 215 aa7.28□□□□□ -1.24
LIG4-202ENST00000405925 POU2AF1Q16633 256 aa7.28□□□□□ -1.24
LIG4-202ENST00000405925 PIP4P2Q8N4L2 257 aa7.28□□□□□ -1.24
LIG4-202ENST00000405925 RAX2Q96IS3 184 aa7.28□□□□□ -1.24
LIG4-202ENST00000405925 ZNF586Q9NXT0 402 aa7.28□□□□□ -1.24
LIG4-202ENST00000405925 NDUFB8O95169 186 aa7.28□□□□□ -1.24
LIG4-202ENST00000405925 MGPP08493 103 aa7.28□□□□□ -1.24
LIG4-202ENST00000405925 STAG3L2P0CL84 134 aa7.28□□□□□ -1.24
LIG4-202ENST00000405925 STAG3L3P0CL85 134 aa7.28□□□□□ -1.24
LIG4-202ENST00000405925 SMUG1Q53HV7 270 aa7.28□□□□□ -1.24
LIG4-202ENST00000405925 FAM162BQ5T6X4 162 aa7.28□□□□□ -1.24
LIG4-202ENST00000405925 SPSB3Q6PJ21 355 aa7.28□□□□□ -1.24
LIG4-202ENST00000405925 C8orf31Q8N9H6 132 aa7.28□□□□□ -1.24
LIG4-202ENST00000405925 SRSF8Q9BRL6 282 aaKnown RBP7.28□□□□□ -1.24
LIG4-202ENST00000405925 CENPVL3A0A0U1RRI6 287 aa7.28□□□□□ -1.24
LIG4-202ENST00000405925 ZNF253O75346 499 aa7.28□□□□□ -1.24
LIG4-202ENST00000405925 CRISP2P16562 243 aa7.28□□□□□ -1.24
LIG4-202ENST00000405925 NDPQ00604 133 aa7.28□□□□□ -1.24
LIG4-202ENST00000405925 KLHL30-AS1Q8NEE0 82 aa7.28□□□□□ -1.24
LIG4-202ENST00000405925 TMEM18Q96B42 140 aa7.28□□□□□ -1.24
LIG4-202ENST00000405925 SAPCD1Q5SSQ6 148 aa7.27□□□□□ -1.24
LIG4-202ENST00000405925 MBD3L1Q8WWY6 194 aa7.27□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms