RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 SAP30O75446 220 aa7.02□□□□□ -1.29
CHD8-201ENST00000399982 EIF4EBP2Q13542 120 aaPredicted RBP7.02□□□□□ -1.29
CHD8-201ENST00000399982 ZAR1Q86SH2 424 aa7.02□□□□□ -1.29
CHD8-201ENST00000399982 CHAC1Q9BUX1 264 aa7.02□□□□□ -1.29
CHD8-201ENST00000399982 CFPP27918 469 aa7.01□□□□□ -1.29
CHD8-201ENST00000399982 GAS1P54826 345 aa7.01□□□□□ -1.29
CHD8-201ENST00000399982 MESP2Q0VG99 397 aa7.01□□□□□ -1.29
CHD8-201ENST00000399982 C9orf40Q8IXQ3 194 aa7.01□□□□□ -1.29
CHD8-201ENST00000399982 TMEM54Q969K7 222 aa7.01□□□□□ -1.29
CHD8-201ENST00000399982 SCARF2Q96GP6 870 aaPredicted RBP7.01□□□□□ -1.29
CHD8-201ENST00000399982 AMELYQ99218 206 aa7.01□□□□□ -1.29
CHD8-201ENST00000399982 IGLV3-21P80748 117 aaPredicted RBP7.01□□□□□ -1.29
CHD8-201ENST00000399982 SPATA31B1PQ5VZV4 182 aa7.01□□□□□ -1.29
CHD8-201ENST00000399982 DEFB105AQ8NG35 78 aa7.01□□□□□ -1.29
CHD8-201ENST00000399982 FAM168AQ92567 244 aa7.01□□□□□ -1.29
CHD8-201ENST00000399982 SS18Q15532 418 aa7.01□□□□□ -1.29
CHD8-201ENST00000399982 Q9H3A6 140 aa7.01□□□□□ -1.29
CHD8-201ENST00000399982 POLR3KQ9Y2Y1 108 aaPredicted RBP7.01□□□□□ -1.29
CHD8-201ENST00000399982 ACYP1P07311 99 aa7.01□□□□□ -1.29
CHD8-201ENST00000399982 UCNP55089 124 aa7.01□□□□□ -1.29
CHD8-201ENST00000399982 C9orf50Q5SZB4 431 aa7.01□□□□□ -1.29
CHD8-201ENST00000399982 RP1L1Q8IWN7 2480 aaPredicted RBP7.01□□□□□ -1.29
CHD8-201ENST00000399982 MPDZO75970 2070 aa7.01□□□□□ -1.29
CHD8-201ENST00000399982 C8orf31Q8N9H6 132 aa7.01□□□□□ -1.29
CHD8-201ENST00000399982 WFDC9Q8NEX5 89 aa7.01□□□□□ -1.29
CHD8-201ENST00000399982 LTBP4Q8N2S1 1624 aa7.01□□□□□ -1.29
CHD8-201ENST00000399982 ZNF561-AS1K7EIQ3 104 aa7.01□□□□□ -1.29
CHD8-201ENST00000399982 RAMP3O60896 148 aa7.01□□□□□ -1.29
CHD8-201ENST00000399982 IGLC2P0DOY2 106 aa7.01□□□□□ -1.29
CHD8-201ENST00000399982 IGLC3P0DOY3 106 aa7.01□□□□□ -1.29
CHD8-201ENST00000399982 CCL3P10147 92 aa7.01□□□□□ -1.29
CHD8-201ENST00000399982 APC2O95996 2303 aa7.01□□□□□ -1.29
CHD8-201ENST00000399982 RCHY1Q96PM5 261 aa7.01□□□□□ -1.29
CHD8-201ENST00000399982 SCN5AQ14524 2016 aa7□□□□□ -1.29
CHD8-201ENST00000399982 AHRRA9YTQ3 701 aa7□□□□□ -1.29
CHD8-201ENST00000399982 LSM4Q9Y4Z0 139 aaKnown RBP7□□□□□ -1.29
CHD8-201ENST00000399982 TFF3Q07654 80 aa7□□□□□ -1.29
CHD8-201ENST00000399982 GREM1O60565 184 aa7□□□□□ -1.29
CHD8-201ENST00000399982 MYOD1P15172 320 aa7□□□□□ -1.29
CHD8-201ENST00000399982 LYPD1Q8N2G4 141 aa7□□□□□ -1.29
CHD8-201ENST00000399982 UBE2E2Q96LR5 201 aa7□□□□□ -1.29
CHD8-201ENST00000399982 SCRT1Q9BWW7 348 aa7□□□□□ -1.29
CHD8-201ENST00000399982 TTTY12Q9BZ98 90 aa7□□□□□ -1.29
CHD8-201ENST00000399982 IGKV1D-16P01601 117 aa7□□□□□ -1.29
CHD8-201ENST00000399982 C14orf132Q9NPU4 83 aa7□□□□□ -1.29
CHD8-201ENST00000399982 SOCS3O14543 225 aa7□□□□□ -1.29
CHD8-201ENST00000399982 LINC01545Q5VT33 79 aa7□□□□□ -1.29
CHD8-201ENST00000399982 LINC00114Q6XXX2 140 aa7□□□□□ -1.29
CHD8-201ENST00000399982 C7orf69Q9H7B7 122 aa7□□□□□ -1.29
CHD8-201ENST00000399982 PDCD11Q14690 1871 aaKnown RBP7□□□□□ -1.29
CHD8-201ENST00000399982 IGHV2-26A0A0B4J1V2 119 aa7□□□□□ -1.29
CHD8-201ENST00000399982 SLAQ13239 276 aa7□□□□□ -1.29
CHD8-201ENST00000399982 SMIM2Q9BVW6 85 aa7□□□□□ -1.29
CHD8-201ENST00000399982 TRGV11A0A075B6L2 103 aa6.99□□□□□ -1.29
CHD8-201ENST00000399982 TRGV1A0A0A0MS02 117 aa6.99□□□□□ -1.29
CHD8-201ENST00000399982 IGHV2OR16-5A0A0B4J2B6 119 aa6.99□□□□□ -1.29
CHD8-201ENST00000399982 NBL1P41271 181 aa6.99□□□□□ -1.29
CHD8-201ENST00000399982 TEX43Q6ZNM6 134 aa6.99□□□□□ -1.29
CHD8-201ENST00000399982 LINC01560Q8TB33 94 aa6.99□□□□□ -1.29
CHD8-201ENST00000399982 SLC25A28Q96A46 364 aa6.99□□□□□ -1.29
CHD8-201ENST00000399982 CFHR5Q9BXR6 569 aa6.99□□□□□ -1.29
CHD8-201ENST00000399982 RNASE7Q9H1E1 156 aaKnown RBP6.99□□□□□ -1.29
CHD8-201ENST00000399982 C15orf61A6NNL5 157 aa6.99□□□□□ -1.29
CHD8-201ENST00000399982 ZNF474Q6S9Z5 364 aaPredicted RBP6.99□□□□□ -1.29
CHD8-201ENST00000399982 RASL10AQ92737 203 aa6.99□□□□□ -1.29
CHD8-201ENST00000399982 DTX4Q9Y2E6 619 aa6.99□□□□□ -1.29
CHD8-201ENST00000399982 UPK2O00526 184 aa6.99□□□□□ -1.29
CHD8-201ENST00000399982 FOXL2P58012 376 aa6.99□□□□□ -1.29
CHD8-201ENST00000399982 NAA38Q9BRA0 125 aaKnown RBP6.99□□□□□ -1.29
CHD8-201ENST00000399982 IGFBP2P18065 325 aa6.99□□□□□ -1.29
CHD8-201ENST00000399982 PILRBQ9UKJ0 227 aa6.99□□□□□ -1.29
CHD8-201ENST00000399982 TDRD15B5MCY1 1934 aaKnown RBP6.99□□□□□ -1.29
CHD8-201ENST00000399982 CSTL1Q9H114 145 aa6.99□□□□□ -1.29
CHD8-201ENST00000399982 PILRAQ9UKJ1 303 aa6.99□□□□□ -1.29
CHD8-201ENST00000399982 PCNX2A6NKB5 2137 aa6.99□□□□□ -1.29
CHD8-201ENST00000399982 DOCK1Q14185 1865 aa6.99□□□□□ -1.29
CHD8-201ENST00000399982 EFNB3Q15768 340 aa6.98□□□□□ -1.29
CHD8-201ENST00000399982 TMEM240Q5SV17 173 aa6.98□□□□□ -1.29
CHD8-201ENST00000399982 OR11H6Q8NGC7 330 aa6.98□□□□□ -1.29
CHD8-201ENST00000399982 DUSP15Q9H1R2 295 aaPredicted RBP6.98□□□□□ -1.29
CHD8-201ENST00000399982 DUSP14O95147 198 aaKnown RBP6.98□□□□□ -1.29
CHD8-201ENST00000399982 YPEL3P61236 119 aaPredicted RBP6.98□□□□□ -1.29
CHD8-201ENST00000399982 F5P12259 2224 aa6.98□□□□□ -1.29
CHD8-201ENST00000399982 SMIM10L1P0DMW3 83 aa6.98□□□□□ -1.29
CHD8-201ENST00000399982 CCL4P13236 92 aa6.98□□□□□ -1.29
CHD8-201ENST00000399982 COA6Q5JTJ3 125 aaKnown RBP6.98□□□□□ -1.29
CHD8-201ENST00000399982 LILRA6Q6PI73 481 aa6.98□□□□□ -1.29
CHD8-201ENST00000399982 Q6ZS49 121 aa6.98□□□□□ -1.29
CHD8-201ENST00000399982 LCNL1Q6ZST4 164 aa6.98□□□□□ -1.29
CHD8-201ENST00000399982 SMIM10Q96HG1 83 aa6.98□□□□□ -1.29
CHD8-201ENST00000399982 ARFGEF3Q5TH69 2177 aa6.98□□□□□ -1.29
CHD8-201ENST00000399982 TRAV12-2A0A075B6T6 113 aa6.98□□□□□ -1.29
CHD8-201ENST00000399982 CELA2BP08218 269 aaPredicted RBP6.98□□□□□ -1.29
CHD8-201ENST00000399982 COL9A1P20849 921 aa6.98□□□□□ -1.29
CHD8-201ENST00000399982 TMEM158Q8WZ71 300 aa6.98□□□□□ -1.29
CHD8-201ENST00000399982 R3HDMLQ9H3Y0 253 aa6.98□□□□□ -1.29
CHD8-201ENST00000399982 YPEL1O60688 119 aa6.98□□□□□ -1.29
CHD8-201ENST00000399982 YPEL2Q96QA6 119 aa6.98□□□□□ -1.29
CHD8-201ENST00000399982 METRNQ9UJH8 293 aa6.98□□□□□ -1.29
CHD8-201ENST00000399982 QSER1Q2KHR3 1735 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms