RNA–Protein interactions for RNA: ENST00000399598.6

UBXN2B-201, Transcript of UBX domain protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2B, Length 5,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2B-201ENST00000399598 LINC01551Q86U37 167 aa12.54□□□□□ -0.4
UBXN2B-201ENST00000399598 C17orf82Q86X59 251 aaPredicted RBP12.54□□□□□ -0.4
UBXN2B-201ENST00000399598 C8orf46Q8TAG6 207 aa12.54□□□□□ -0.4
UBXN2B-201ENST00000399598 ST20Q9HBF5 79 aa12.54□□□□□ -0.4
UBXN2B-201ENST00000399598 CLDN16Q9Y5I7 305 aa12.54□□□□□ -0.4
UBXN2B-201ENST00000399598 TRAV1-1A0A0B4J248 108 aa12.54□□□□□ -0.4
UBXN2B-201ENST00000399598 SRSF7Q16629 238 aaKnown RBP eCLIP12.54□□□□□ -0.4
UBXN2B-201ENST00000399598 GLRX5Q86SX6 157 aa12.54□□□□□ -0.4
UBXN2B-201ENST00000399598 FNDC4Q9H6D8 234 aaPredicted RBP12.54□□□□□ -0.4
UBXN2B-201ENST00000399598 LILRA1O75019 489 aa12.53□□□□□ -0.4
UBXN2B-201ENST00000399598 CLPSP04118 112 aa12.53□□□□□ -0.4
UBXN2B-201ENST00000399598 CD33P20138 364 aa12.53□□□□□ -0.4
UBXN2B-201ENST00000399598 REG4Q9BYZ8 158 aa12.53□□□□□ -0.4
UBXN2B-201ENST00000399598 MEGF9Q9H1U4 602 aa12.53□□□□□ -0.4
UBXN2B-201ENST00000399598 NXT2Q9NPJ8 142 aaKnown RBP12.53□□□□□ -0.4
UBXN2B-201ENST00000399598 PDCD11Q14690 1871 aaKnown RBP12.53□□□□□ -0.4
UBXN2B-201ENST00000399598 TRAV21A0A0B4J279 112 aa12.53□□□□□ -0.4
UBXN2B-201ENST00000399598 HTN3P15516 51 aa12.53□□□□□ -0.4
UBXN2B-201ENST00000399598 C10orf126Q8N4M7 172 aa12.53□□□□□ -0.4
UBXN2B-201ENST00000399598 WFDC12Q8WWY7 111 aa12.53□□□□□ -0.4
UBXN2B-201ENST00000399598 PPBPP02775 128 aa12.53□□□□□ -0.4
UBXN2B-201ENST00000399598 THBDP07204 575 aa12.53□□□□□ -0.4
UBXN2B-201ENST00000399598 MYOD1P15172 320 aa12.53□□□□□ -0.4
UBXN2B-201ENST00000399598 EXOC3-AS1Q8N2X6 119 aa12.53□□□□□ -0.4
UBXN2B-201ENST00000399598 DPM2O94777 84 aa12.52□□□□□ -0.4
UBXN2B-201ENST00000399598 CD59P13987 128 aa12.52□□□□□ -0.4
UBXN2B-201ENST00000399598 SRSF1Q07955 248 aaKnown RBP eCLIP12.52□□□□□ -0.4
UBXN2B-201ENST00000399598 FOXL1Q12952 345 aa12.52□□□□□ -0.4
UBXN2B-201ENST00000399598 TMEM14EPQ6UXP3 125 aa12.52□□□□□ -0.4
UBXN2B-201ENST00000399598 LOC285556D6RIA3 1793 aa12.52□□□□□ -0.4
UBXN2B-201ENST00000399598 TRBV7-9A0A0J9YWB2 115 aa12.52□□□□□ -0.4
UBXN2B-201ENST00000399598 PSG1P11464 419 aa12.52□□□□□ -0.4
UBXN2B-201ENST00000399598 IFI27P40305 119 aaPredicted RBP12.52□□□□□ -0.4
UBXN2B-201ENST00000399598 ZNF585BQ52M93 769 aa12.52□□□□□ -0.4
UBXN2B-201ENST00000399598 CD177Q8N6Q3 437 aa12.52□□□□□ -0.4
UBXN2B-201ENST00000399598 SELENOKQ9Y6D0 94 aa12.52□□□□□ -0.4
UBXN2B-201ENST00000399598 SRD5A1P18405 259 aa12.52□□□□□ -0.41
UBXN2B-201ENST00000399598 CNTFRP26992 372 aa12.52□□□□□ -0.41
UBXN2B-201ENST00000399598 LINC00205P59089 165 aa12.52□□□□□ -0.41
UBXN2B-201ENST00000399598 IFI27L1Q96BM0 104 aa12.52□□□□□ -0.41
UBXN2B-201ENST00000399598 LDLRAD2Q5SZI1 272 aa12.52□□□□□ -0.41
UBXN2B-201ENST00000399598 TMEM167AQ8TBQ9 72 aa12.52□□□□□ -0.41
UBXN2B-201ENST00000399598 CYSLTR1Q9Y271 337 aa12.52□□□□□ -0.41
UBXN2B-201ENST00000399598 PSME4Q14997 1843 aa12.52□□□□□ -0.41
UBXN2B-201ENST00000399598 LINC00469Q8N7U9 141 aa12.51□□□□□ -0.41
UBXN2B-201ENST00000399598 FAM169BQ8N8A8 192 aa12.51□□□□□ -0.41
UBXN2B-201ENST00000399598 MGST2Q99735 147 aa12.51□□□□□ -0.41
UBXN2B-201ENST00000399598 NPFFR1Q9GZQ6 430 aa12.51□□□□□ -0.41
UBXN2B-201ENST00000399598 SCRT1Q9BWW7 348 aa12.51□□□□□ -0.41
UBXN2B-201ENST00000399598 Q0VFX4 171 aa12.51□□□□□ -0.41
UBXN2B-201ENST00000399598 PLSCR4Q9NRQ2 329 aa12.51□□□□□ -0.41
UBXN2B-201ENST00000399598 IGHV2-26A0A0B4J1V2 119 aa12.51□□□□□ -0.41
UBXN2B-201ENST00000399598 QRFPP83859 136 aa12.51□□□□□ -0.41
UBXN2B-201ENST00000399598 ZNF672Q499Z4 452 aaPredicted RBP12.51□□□□□ -0.41
UBXN2B-201ENST00000399598 ZNF407Q9C0G0 2248 aa12.5□□□□□ -0.41
UBXN2B-201ENST00000399598 RPL15P61313 204 aaKnown RBP12.5□□□□□ -0.41
UBXN2B-201ENST00000399598 KLF17Q5JT82 389 aaPredicted RBP12.5□□□□□ -0.41
UBXN2B-201ENST00000399598 TMEM200BQ69YZ2 307 aa12.5□□□□□ -0.41
UBXN2B-201ENST00000399598 IGKV2-40A0A087WW87 121 aaPredicted RBP12.5□□□□□ -0.41
UBXN2B-201ENST00000399598 LINC00473A8K010 186 aa12.5□□□□□ -0.41
UBXN2B-201ENST00000399598 E9PLN8 166 aa12.5□□□□□ -0.41
UBXN2B-201ENST00000399598 IGKV2D-40P01614 121 aaPredicted RBP12.5□□□□□ -0.41
UBXN2B-201ENST00000399598 TMEM256Q8N2U0 113 aa12.5□□□□□ -0.41
UBXN2B-201ENST00000399598 TNFRSF14Q92956 283 aa12.5□□□□□ -0.41
UBXN2B-201ENST00000399598 CSRP1P21291 193 aaKnown RBP12.5□□□□□ -0.41
UBXN2B-201ENST00000399598 SAMD13Q5VXD3 122 aa12.5□□□□□ -0.41
UBXN2B-201ENST00000399598 TMEM42Q69YG0 159 aa12.5□□□□□ -0.41
UBXN2B-201ENST00000399598 DOCK8Q8NF50 2099 aa12.5□□□□□ -0.41
UBXN2B-201ENST00000399598 TRAV40A0A0B4J280 105 aa12.5□□□□□ -0.41
UBXN2B-201ENST00000399598 A0A1B0GV72 72 aa12.5□□□□□ -0.41
UBXN2B-201ENST00000399598 NCR2O95944 276 aa12.5□□□□□ -0.41
UBXN2B-201ENST00000399598 PAX8Q06710 450 aa12.5□□□□□ -0.41
UBXN2B-201ENST00000399598 MTURNQ8N3F0 131 aa12.5□□□□□ -0.41
UBXN2B-201ENST00000399598 TDGF1P13385 188 aa12.49□□□□□ -0.41
UBXN2B-201ENST00000399598 IGHV1-8P0DP01 117 aa12.49□□□□□ -0.41
UBXN2B-201ENST00000399598 CRIM1Q9NZV1 1036 aa12.49□□□□□ -0.41
UBXN2B-201ENST00000399598 BRWD3Q6RI45 1802 aa12.49□□□□□ -0.41
UBXN2B-201ENST00000399598 C15orf32Q32M92 178 aa12.49□□□□□ -0.41
UBXN2B-201ENST00000399598 C11orf44Q8N8P7 122 aa12.49□□□□□ -0.41
UBXN2B-201ENST00000399598 CHCHD1Q96BP2 118 aaKnown RBP12.49□□□□□ -0.41
UBXN2B-201ENST00000399598 PEMTQ9UBM1 199 aa12.49□□□□□ -0.41
UBXN2B-201ENST00000399598 TMEM95Q3KNT9 176 aa12.49□□□□□ -0.41
UBXN2B-201ENST00000399598 ATP5L2Q7Z4Y8 100 aa12.49□□□□□ -0.41
UBXN2B-201ENST00000399598 RALGAPA2Q2PPJ7 1873 aa12.48□□□□□ -0.41
UBXN2B-201ENST00000399598 BDP1A6H8Y1 2624 aa12.48□□□□□ -0.41
UBXN2B-201ENST00000399598 TRAV12-3A0A0B4J271 114 aa12.48□□□□□ -0.41
UBXN2B-201ENST00000399598 A0A0G2JRQ6 117 aa12.48□□□□□ -0.41
UBXN2B-201ENST00000399598 NTF4P34130 210 aa12.48□□□□□ -0.41
UBXN2B-201ENST00000399598 ORMDL2Q53FV1 153 aa12.48□□□□□ -0.41
UBXN2B-201ENST00000399598 BMPERQ8N8U9 685 aa12.48□□□□□ -0.41
UBXN2B-201ENST00000399598 A0A0U1RRA0 63 aa12.48□□□□□ -0.41
UBXN2B-201ENST00000399598 DMRTC2Q8IXT2 367 aaPredicted RBP12.48□□□□□ -0.41
UBXN2B-201ENST00000399598 ORAOV1Q8WV07 137 aa12.48□□□□□ -0.41
UBXN2B-201ENST00000399598 PRSS22Q9GZN4 317 aa12.48□□□□□ -0.41
UBXN2B-201ENST00000399598 MBNL3Q9NUK0 354 aaKnown RBP12.48□□□□□ -0.41
UBXN2B-201ENST00000399598 A0A1B0GW64 132 aa12.48□□□□□ -0.41
UBXN2B-201ENST00000399598 A6NNC1 897 aa12.48□□□□□ -0.41
UBXN2B-201ENST00000399598 SLC25A48Q6ZT89 311 aaKnown RBP12.48□□□□□ -0.41
UBXN2B-201ENST00000399598 SLC25A39Q9BZJ4 359 aaPredicted RBP12.48□□□□□ -0.41
UBXN2B-201ENST00000399598 TRAV8-2A0A0B4J237 113 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms