RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 PMS2P11Q13670 270 aa10.12□□□□□ -0.79
CXCL12-205ENST00000395794 CIB3Q96Q77 187 aaPredicted RBP10.12□□□□□ -0.79
CXCL12-205ENST00000395794 RARRES2Q99969 163 aa10.12□□□□□ -0.79
CXCL12-205ENST00000395794 SRRQ9GZT4 340 aa10.12□□□□□ -0.79
CXCL12-205ENST00000395794 RYR2Q92736 4967 aa10.11□□□□□ -0.79
CXCL12-205ENST00000395794 NUPR2A6NF83 97 aa10.11□□□□□ -0.79
CXCL12-205ENST00000395794 PITX3O75364 302 aa10.11□□□□□ -0.79
CXCL12-205ENST00000395794 HOXB5P09067 269 aa10.11□□□□□ -0.79
CXCL12-205ENST00000395794 ZNF688P0C7X2 276 aa10.11□□□□□ -0.79
CXCL12-205ENST00000395794 IAPPP10997 89 aa10.11□□□□□ -0.79
CXCL12-205ENST00000395794 PSG1P11464 419 aa10.11□□□□□ -0.79
CXCL12-205ENST00000395794 ATF4P18848 351 aaPredicted RBP10.11□□□□□ -0.79
CXCL12-205ENST00000395794 LCE2CQ5TA81 110 aa10.11□□□□□ -0.79
CXCL12-205ENST00000395794 C16orf54Q6UWD8 224 aa10.11□□□□□ -0.79
CXCL12-205ENST00000395794 FAM24BQ8N5W8 94 aa10.11□□□□□ -0.79
CXCL12-205ENST00000395794 OR51G1Q8NGK1 321 aa10.11□□□□□ -0.79
CXCL12-205ENST00000395794 PBDC1Q9BVG4 233 aa10.11□□□□□ -0.79
CXCL12-205ENST00000395794 U3KQE9 123 aa10.11□□□□□ -0.79
CXCL12-205ENST00000395794 DYNC2H1Q8NCM8 4307 aaKnown RBP10.11□□□□□ -0.79
CXCL12-205ENST00000395794 TENM2Q9NT68 2774 aa10.1□□□□□ -0.79
CXCL12-205ENST00000395794 SNRPD3P62318 126 aaKnown RBP10.1□□□□□ -0.79
CXCL12-205ENST00000395794 GAMTQ14353 236 aa10.1□□□□□ -0.79
CXCL12-205ENST00000395794 USF2Q15853 346 aaPredicted RBP10.1□□□□□ -0.79
CXCL12-205ENST00000395794 TMEM41BQ5BJD5 291 aa10.1□□□□□ -0.79
CXCL12-205ENST00000395794 OR11H2Q8NH07 326 aa10.1□□□□□ -0.79
CXCL12-205ENST00000395794 RNF125Q96EQ8 232 aa10.1□□□□□ -0.79
CXCL12-205ENST00000395794 LINC00854A0A1B0GVQ3 168 aa10.09□□□□□ -0.79
CXCL12-205ENST00000395794 SNRPGP15A8MWD9 76 aa10.09□□□□□ -0.79
CXCL12-205ENST00000395794 SYNGR2O43760 224 aa10.09□□□□□ -0.79
CXCL12-205ENST00000395794 NDUFB6O95139 128 aa10.09□□□□□ -0.79
CXCL12-205ENST00000395794 MORN3Q6PF18 240 aaPredicted RBP10.09□□□□□ -0.79
CXCL12-205ENST00000395794 SIGLEC15Q6ZMC9 328 aa10.09□□□□□ -0.79
CXCL12-205ENST00000395794 COQ8AQ8NI60 647 aa10.09□□□□□ -0.79
CXCL12-205ENST00000395794 DCANP1Q8TF63 244 aa10.09□□□□□ -0.79
CXCL12-205ENST00000395794 GLMPQ8WWB7 406 aa10.09□□□□□ -0.79
CXCL12-205ENST00000395794 MAGT1Q9H0U3 335 aa10.09□□□□□ -0.79
CXCL12-205ENST00000395794 NRN1Q9NPD7 142 aa10.09□□□□□ -0.79
CXCL12-205ENST00000395794 KLK5Q9Y337 293 aaPredicted RBP10.09□□□□□ -0.79
CXCL12-205ENST00000395794 J3QL48 77 aa10.08□□□□□ -0.8
CXCL12-205ENST00000395794 WRBO00258 174 aa10.08□□□□□ -0.8
CXCL12-205ENST00000395794 BUB3O43684 328 aa10.08□□□□□ -0.8
CXCL12-205ENST00000395794 IFNA21P01568 189 aa10.08□□□□□ -0.8
CXCL12-205ENST00000395794 SPP1P10451 314 aa10.08□□□□□ -0.8
CXCL12-205ENST00000395794 BAK1Q16611 211 aa10.08□□□□□ -0.8
CXCL12-205ENST00000395794 PSMG4Q5JS54 123 aa10.08□□□□□ -0.8
CXCL12-205ENST00000395794 ACTL10Q5JWF8 245 aa10.08□□□□□ -0.8
CXCL12-205ENST00000395794 GGNBP1Q5YKI7 109 aa10.08□□□□□ -0.8
CXCL12-205ENST00000395794 OR8G2PQ6IF36 304 aa10.08□□□□□ -0.8
CXCL12-205ENST00000395794 CEMP1Q6PRD7 247 aaPredicted RBP10.08□□□□□ -0.8
CXCL12-205ENST00000395794 PPP1R14BQ96C90 147 aa10.08□□□□□ -0.8
CXCL12-205ENST00000395794 NDUFA13Q9P0J0 144 aa10.08□□□□□ -0.8
CXCL12-205ENST00000395794 LYSTQ99698 3801 aa10.07□□□□□ -0.8
CXCL12-205ENST00000395794 LOC100996750A0A140TA64 210 aa10.07□□□□□ -0.8
CXCL12-205ENST00000395794 C9orf170A2RU37 121 aa10.07□□□□□ -0.8
CXCL12-205ENST00000395794 KNCNA6PVL3 124 aa10.07□□□□□ -0.8
CXCL12-205ENST00000395794 CFDP00746 253 aaPredicted RBP10.07□□□□□ -0.8
CXCL12-205ENST00000395794 LYZP61626 148 aa10.07□□□□□ -0.8
CXCL12-205ENST00000395794 EWSR1Q01844 656 aaKnown RBP eCLIP10.07□□□□□ -0.8
CXCL12-205ENST00000395794 ZNF90Q03938 601 aa10.07□□□□□ -0.8
CXCL12-205ENST00000395794 C4orf46Q504U0 113 aa10.07□□□□□ -0.8
CXCL12-205ENST00000395794 SPANXN5Q5MJ07 72 aa10.07□□□□□ -0.8
CXCL12-205ENST00000395794 TRPT1Q86TN4 253 aaKnown RBP10.07□□□□□ -0.8
CXCL12-205ENST00000395794 C7orf50Q9BRJ6 194 aaKnown RBP10.07□□□□□ -0.8
CXCL12-205ENST00000395794 KRTAP4-6Q9BYQ5 205 aa10.07□□□□□ -0.8
CXCL12-205ENST00000395794 MFFQ9GZY8 342 aa10.07□□□□□ -0.8
CXCL12-205ENST00000395794 SEPSECSQ9HD40 501 aaKnown RBP10.07□□□□□ -0.8
CXCL12-205ENST00000395794 FBXL17Q9UF56 701 aa10.07□□□□□ -0.8
CXCL12-205ENST00000395794 STRAPQ9Y3F4 350 aaKnown RBP10.07□□□□□ -0.8
CXCL12-205ENST00000395794 S100A7P31151 101 aa10.06□□□□□ -0.8
CXCL12-205ENST00000395794 NUTF2P61970 127 aaKnown RBP10.06□□□□□ -0.8
CXCL12-205ENST00000395794 OR2F1Q13607 317 aa10.06□□□□□ -0.8
CXCL12-205ENST00000395794 CNPY1Q3B7I2 92 aa10.06□□□□□ -0.8
CXCL12-205ENST00000395794 C1orf194Q5T5A4 169 aa10.06□□□□□ -0.8
CXCL12-205ENST00000395794 C11orf45Q8TAV5 145 aa10.06□□□□□ -0.8
CXCL12-205ENST00000395794 RAB40CQ96S21 281 aa10.06□□□□□ -0.8
CXCL12-205ENST00000395794 TRGV9Q99603 122 aa10.06□□□□□ -0.8
CXCL12-205ENST00000395794 C11orf68Q9H3H3 251 aaKnown RBP10.06□□□□□ -0.8
CXCL12-205ENST00000395794 IGKV1D-37A0A075B6S9 117 aa10.05□□□□□ -0.8
CXCL12-205ENST00000395794 ADAP1O75689 374 aa10.05□□□□□ -0.8
CXCL12-205ENST00000395794 OR4E1P0C645 316 aa10.05□□□□□ -0.8
CXCL12-205ENST00000395794 IL7P13232 177 aa10.05□□□□□ -0.8
CXCL12-205ENST00000395794 ID1P41134 155 aa10.05□□□□□ -0.8
CXCL12-205ENST00000395794 FLVCR2Q9UPI3 526 aa10.05□□□□□ -0.8
CXCL12-205ENST00000395794 H3BP45 60 aa10.04□□□□□ -0.8
CXCL12-205ENST00000395794 ANXA7P20073 488 aaKnown RBP10.04□□□□□ -0.8
CXCL12-205ENST00000395794 NKX2-1P43699 371 aaPredicted RBP10.04□□□□□ -0.8
CXCL12-205ENST00000395794 AKR1C1Q04828 323 aa10.04□□□□□ -0.8
CXCL12-205ENST00000395794 OR8I2Q8N0Y5 310 aa10.04□□□□□ -0.8
CXCL12-205ENST00000395794 THAP8Q8NA92 274 aa10.04□□□□□ -0.8
CXCL12-205ENST00000395794 PHLDA1Q8WV24 401 aaPredicted RBP10.04□□□□□ -0.8
CXCL12-205ENST00000395794 C1QTNF4Q9BXJ3 329 aa10.04□□□□□ -0.8
CXCL12-205ENST00000395794 SACSQ9NZJ4 4579 aa10.04□□□□□ -0.8
CXCL12-205ENST00000395794 LY6G6CO95867 125 aa10.03□□□□□ -0.8
CXCL12-205ENST00000395794 POLR2GP62487 172 aaKnown RBP eCLIP10.03□□□□□ -0.8
CXCL12-205ENST00000395794 ID3Q02535 119 aa10.03□□□□□ -0.8
CXCL12-205ENST00000395794 SAMD13Q5VXD3 122 aa10.03□□□□□ -0.8
CXCL12-205ENST00000395794 BPIFCQ8NFQ6 507 aa10.03□□□□□ -0.8
CXCL12-205ENST00000395794 LINC00052Q96N35 136 aa10.03□□□□□ -0.8
CXCL12-205ENST00000395794 SDHCQ99643 169 aaPredicted RBP10.03□□□□□ -0.8
CXCL12-205ENST00000395794 PSENENQ9NZ42 101 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms