RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 ADMP35318 185 aa13.48□□□□□ -0.25
SCN3B-202ENST00000392770 SAA4P35542 130 aa13.48□□□□□ -0.25
SCN3B-202ENST00000392770 TMEM136Q6ZRR5 245 aa13.48□□□□□ -0.25
SCN3B-202ENST00000392770 M0R3E3 92 aa13.48□□□□□ -0.25
SCN3B-202ENST00000392770 LDLRAD2Q5SZI1 272 aa13.48□□□□□ -0.25
SCN3B-202ENST00000392770 SP5Q6BEB4 398 aaPredicted RBP13.48□□□□□ -0.25
SCN3B-202ENST00000392770 ZNF833PQ6ZTB9 187 aa13.48□□□□□ -0.25
SCN3B-202ENST00000392770 LINC00518Q8N0U6 118 aa13.48□□□□□ -0.25
SCN3B-202ENST00000392770 APOHP02749 345 aaPredicted RBP13.48□□□□□ -0.25
SCN3B-202ENST00000392770 TMEM131Q92545 1883 aa13.47□□□□□ -0.25
SCN3B-202ENST00000392770 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.47□□□□□ -0.25
SCN3B-202ENST00000392770 LYRM7Q5U5X0 104 aa13.47□□□□□ -0.25
SCN3B-202ENST00000392770 SSC4DQ8WTU2 575 aa13.47□□□□□ -0.25
SCN3B-202ENST00000392770 KIR2DL4Q99706 377 aa13.47□□□□□ -0.25
SCN3B-202ENST00000392770 PMS2P5A8MQ11 134 aa13.47□□□□□ -0.25
SCN3B-202ENST00000392770 FABP5P3A8MUU1 101 aa13.47□□□□□ -0.25
SCN3B-202ENST00000392770 AREGP15514 252 aa13.47□□□□□ -0.25
SCN3B-202ENST00000392770 SRD5A1P18405 259 aa13.47□□□□□ -0.25
SCN3B-202ENST00000392770 LEPP41159 167 aa13.47□□□□□ -0.25
SCN3B-202ENST00000392770 SELENOKQ9Y6D0 94 aa13.47□□□□□ -0.25
SCN3B-202ENST00000392770 SLC25A16P16260 332 aa13.47□□□□□ -0.25
SCN3B-202ENST00000392770 KRTAP27-1Q3LI81 207 aa13.47□□□□□ -0.25
SCN3B-202ENST00000392770 LINC01356Q8N9X3 169 aa13.47□□□□□ -0.25
SCN3B-202ENST00000392770 ZNF25P17030 456 aaPredicted RBP13.47□□□□□ -0.25
SCN3B-202ENST00000392770 RUSC1-AS1Q66K80 236 aa13.47□□□□□ -0.25
SCN3B-202ENST00000392770 RNF166Q96A37 237 aaPredicted RBP13.47□□□□□ -0.25
SCN3B-202ENST00000392770 DNAJC13O75165 2243 aa13.47□□□□□ -0.25
SCN3B-202ENST00000392770 C7orf71A4D174 169 aa13.46□□□□□ -0.25
SCN3B-202ENST00000392770 CRXO43186 299 aaPredicted RBP13.46□□□□□ -0.25
SCN3B-202ENST00000392770 CNTFRP26992 372 aa13.46□□□□□ -0.25
SCN3B-202ENST00000392770 MLANAQ16655 118 aa13.46□□□□□ -0.25
SCN3B-202ENST00000392770 SSBP4Q9BWG4 385 aaPredicted RBP13.46□□□□□ -0.25
SCN3B-202ENST00000392770 NCOR1P1Q9H4R4 102 aa13.46□□□□□ -0.25
SCN3B-202ENST00000392770 MPDZO75970 2070 aa13.46□□□□□ -0.25
SCN3B-202ENST00000392770 C15orf65H3BRN8 121 aa13.46□□□□□ -0.25
SCN3B-202ENST00000392770 ZNF324O75467 553 aaPredicted RBP13.46□□□□□ -0.25
SCN3B-202ENST00000392770 TEX38Q6PEX7 206 aa13.46□□□□□ -0.25
SCN3B-202ENST00000392770 AGMATQ9BSE5 352 aa13.46□□□□□ -0.25
SCN3B-202ENST00000392770 FER1L5A0AVI2 2057 aa13.46□□□□□ -0.25
SCN3B-202ENST00000392770 MUC22E2RYF6 1773 aaPredicted RBP13.46□□□□□ -0.25
SCN3B-202ENST00000392770 PSMB11A5LHX3 300 aa13.46□□□□□ -0.25
SCN3B-202ENST00000392770 FAM209BQ5JX69 171 aa13.46□□□□□ -0.25
SCN3B-202ENST00000392770 ASCL2Q99929 193 aa13.46□□□□□ -0.25
SCN3B-202ENST00000392770 SPRY4Q9C004 299 aa13.46□□□□□ -0.25
SCN3B-202ENST00000392770 FAM181BA6NEQ2 426 aa13.46□□□□□ -0.26
SCN3B-202ENST00000392770 EXOC3-AS1Q8N2X6 119 aa13.46□□□□□ -0.26
SCN3B-202ENST00000392770 LINC01587Q99440 93 aa13.46□□□□□ -0.26
SCN3B-202ENST00000392770 CIDEAO60543 219 aa13.45□□□□□ -0.26
SCN3B-202ENST00000392770 LOXP28300 417 aaPredicted RBP13.45□□□□□ -0.26
SCN3B-202ENST00000392770 C19orf54Q5BKX5 351 aa13.45□□□□□ -0.26
SCN3B-202ENST00000392770 DERL1Q9BUN8 251 aa13.45□□□□□ -0.26
SCN3B-202ENST00000392770 IGKV2-40A0A087WW87 121 aaPredicted RBP13.45□□□□□ -0.26
SCN3B-202ENST00000392770 C5orf52A6NGY3 159 aa13.45□□□□□ -0.26
SCN3B-202ENST00000392770 NDUFS8O00217 210 aa13.45□□□□□ -0.26
SCN3B-202ENST00000392770 IGKV2D-40P01614 121 aaPredicted RBP13.45□□□□□ -0.26
SCN3B-202ENST00000392770 TMEM170AQ8WVE7 144 aa13.45□□□□□ -0.26
SCN3B-202ENST00000392770 SLX1AQ9BQ83 275 aa13.45□□□□□ -0.26
SCN3B-202ENST00000392770 TRBV7-1A0A0A6YYK4 115 aa13.45□□□□□ -0.26
SCN3B-202ENST00000392770 C11orf44Q8N8P7 122 aa13.45□□□□□ -0.26
SCN3B-202ENST00000392770 NCOR1O75376 2440 aa13.45□□□□□ -0.26
SCN3B-202ENST00000392770 JMJD8Q96S16 334 aa13.44□□□□□ -0.26
SCN3B-202ENST00000392770 TMEM14BQ9NUH8 114 aa13.44□□□□□ -0.26
SCN3B-202ENST00000392770 CA1P00915 261 aaPredicted RBP13.44□□□□□ -0.26
SCN3B-202ENST00000392770 HINT1P49773 126 aaPredicted RBP13.44□□□□□ -0.26
SCN3B-202ENST00000392770 REC114Q7Z4M0 266 aa13.44□□□□□ -0.26
SCN3B-202ENST00000392770 EP300Q09472 2414 aaPredicted RBP13.44□□□□□ -0.26
SCN3B-202ENST00000392770 A0A1W2PPI3 338 aa13.44□□□□□ -0.26
SCN3B-202ENST00000392770 IGKV1-39P01597 117 aa13.44□□□□□ -0.26
SCN3B-202ENST00000392770 IGKV1D-39P04432 117 aa13.44□□□□□ -0.26
SCN3B-202ENST00000392770 UQCR10Q9UDW1 63 aa13.44□□□□□ -0.26
SCN3B-202ENST00000392770 DNLZQ5SXM8 178 aa13.43□□□□□ -0.26
SCN3B-202ENST00000392770 C18orf15Q96N68 181 aa13.43□□□□□ -0.26
SCN3B-202ENST00000392770 UQCRFS1P47985 274 aa13.43□□□□□ -0.26
SCN3B-202ENST00000392770 TOMM40O96008 361 aa13.43□□□□□ -0.26
SCN3B-202ENST00000392770 LOC105371267A0A1B0GV96 52 aa13.43□□□□□ -0.26
SCN3B-202ENST00000392770 LBHQ53QV2 105 aaPredicted RBP13.43□□□□□ -0.26
SCN3B-202ENST00000392770 FBLN7Q53RD9 439 aa13.43□□□□□ -0.26
SCN3B-202ENST00000392770 NUDT10Q8NFP7 164 aa13.43□□□□□ -0.26
SCN3B-202ENST00000392770 NUDT11Q96G61 164 aa13.43□□□□□ -0.26
SCN3B-202ENST00000392770 TMEM70Q9BUB7 260 aa13.43□□□□□ -0.26
SCN3B-202ENST00000392770 SHISA9B4DS77 424 aa13.42□□□□□ -0.26
SCN3B-202ENST00000392770 CD7P09564 240 aa13.42□□□□□ -0.26
SCN3B-202ENST00000392770 NSUN5P1Q3KNT7 163 aa13.42□□□□□ -0.26
SCN3B-202ENST00000392770 FNDC10F2Z333 226 aa13.42□□□□□ -0.26
SCN3B-202ENST00000392770 UBE2E1P51965 193 aa13.42□□□□□ -0.26
SCN3B-202ENST00000392770 ORMDL3Q8N138 153 aa13.42□□□□□ -0.26
SCN3B-202ENST00000392770 WFDC12Q8WWY7 111 aa13.42□□□□□ -0.26
SCN3B-202ENST00000392770 SPSB3Q6PJ21 355 aa13.42□□□□□ -0.26
SCN3B-202ENST00000392770 FGF23Q9GZV9 251 aaPredicted RBP13.42□□□□□ -0.26
SCN3B-202ENST00000392770 ZNF134P52741 427 aa13.42□□□□□ -0.26
SCN3B-202ENST00000392770 STHQ8IWL8 128 aa13.42□□□□□ -0.26
SCN3B-202ENST00000392770 HOXA5P20719 270 aa13.42□□□□□ -0.26
SCN3B-202ENST00000392770 FAM19A2Q8N3H0 131 aa13.42□□□□□ -0.26
SCN3B-202ENST00000392770 SRSF8Q9BRL6 282 aaKnown RBP13.42□□□□□ -0.26
SCN3B-202ENST00000392770 TMEM242Q9NWH2 141 aa13.42□□□□□ -0.26
SCN3B-202ENST00000392770 TNFRSF18Q9Y5U5 241 aa13.42□□□□□ -0.26
SCN3B-202ENST00000392770 IGHV2-70DA0A0C4DH43 119 aa13.41□□□□□ -0.26
SCN3B-202ENST00000392770 H7C1H1 209 aa13.41□□□□□ -0.26
SCN3B-202ENST00000392770 DDTP30046 118 aa13.41□□□□□ -0.26
SCN3B-202ENST00000392770 PAX9P55771 341 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms