RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 CLDN16Q9Y5I7 305 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 ATG2BQ96BY7 2078 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 PATJQ8NI35 1801 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 IGKV1D-13A0A0B4J2D9 117 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 ZNHIT1O43257 154 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 IGKV1-13P0DP09 117 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 GZMBP10144 247 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 CR1LQ2VPA4 569 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 CD177Q8N6Q3 437 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 ZMAT4Q9H898 229 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.87□□□□□ -1.47
CCDC171-201ENST00000380701 TMEM238C9JI98 176 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 PSG1P11464 419 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 PLP1P60201 277 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 SCO2A0A1W2PP80 73 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 CDK2AP2O75956 126 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 SS18Q15532 418 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 BIVMQ86UB2 503 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 LHFPL1Q86WI0 220 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 RHPN1-AS1Q9BWJ2 59 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 ASXL3Q9C0F0 2248 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 FAM186AA6NE01 2351 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 GRIFINA4D1Z8 144 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 ZNF98A6NK75 572 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 HIGD1CA8MV81 97 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 RNF223E7ERA6 249 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 CLPSP04118 112 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 C8orf31Q8N9H6 132 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 GPHA2Q96T91 129 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 GNB1LQ9BYB4 327 aa5.87□□□□□ -1.47
CCDC171-201ENST00000380701 ASCC3Q8N3C0 2202 aaKnown RBP5.87□□□□□ -1.47
CCDC171-201ENST00000380701 A0A1B0GW64 132 aa5.86□□□□□ -1.47
CCDC171-201ENST00000380701 LMO1P25800 156 aa5.86□□□□□ -1.47
CCDC171-201ENST00000380701 TMEM242Q9NWH2 141 aa5.86□□□□□ -1.47
CCDC171-201ENST00000380701 PGPEP1Q9NXJ5 209 aa5.86□□□□□ -1.47
CCDC171-201ENST00000380701 KAAG1Q9UBP8 84 aa5.86□□□□□ -1.47
CCDC171-201ENST00000380701 RNASE1P07998 156 aaKnown RBP5.86□□□□□ -1.47
CCDC171-201ENST00000380701 EFNB1P98172 346 aa5.86□□□□□ -1.47
CCDC171-201ENST00000380701 Q96MF0 132 aa5.86□□□□□ -1.47
CCDC171-201ENST00000380701 PRDM13Q9H4Q3 707 aa5.86□□□□□ -1.47
CCDC171-201ENST00000380701 S4R3C0 116 aa5.86□□□□□ -1.47
CCDC171-201ENST00000380701 DOCK5Q9H7D0 1870 aa5.86□□□□□ -1.47
CCDC171-201ENST00000380701 PSME4Q14997 1843 aa5.86□□□□□ -1.47
CCDC171-201ENST00000380701 PSG3Q16557 428 aa5.86□□□□□ -1.47
CCDC171-201ENST00000380701 MUC21Q5SSG8 566 aa5.86□□□□□ -1.47
CCDC171-201ENST00000380701 MRPL16Q9NX20 251 aaKnown RBP5.86□□□□□ -1.47
CCDC171-201ENST00000380701 CHTOPQ9Y3Y2 248 aaKnown RBP5.86□□□□□ -1.47
CCDC171-201ENST00000380701 NDUFA4O00483 81 aa5.86□□□□□ -1.47
CCDC171-201ENST00000380701 FOXL1Q12952 345 aa5.86□□□□□ -1.47
CCDC171-201ENST00000380701 S100A7L2Q5SY68 101 aa5.86□□□□□ -1.47
CCDC171-201ENST00000380701 TEX36Q5VZQ5 186 aa5.86□□□□□ -1.47
CCDC171-201ENST00000380701 LAIR2Q6ISS4 152 aa5.86□□□□□ -1.47
CCDC171-201ENST00000380701 TREML4Q6UXN2 200 aa5.86□□□□□ -1.47
CCDC171-201ENST00000380701 TMEM14EPQ6UXP3 125 aa5.86□□□□□ -1.47
CCDC171-201ENST00000380701 OR2K2Q8NGT1 345 aa5.86□□□□□ -1.47
CCDC171-201ENST00000380701 MRPL27Q9P0M9 148 aaKnown RBP5.86□□□□□ -1.47
CCDC171-201ENST00000380701 TRGV1A0A0A0MS02 117 aa5.85□□□□□ -1.47
CCDC171-201ENST00000380701 MLNRO43193 412 aa5.85□□□□□ -1.47
CCDC171-201ENST00000380701 Q6P435 159 aa5.85□□□□□ -1.47
CCDC171-201ENST00000380701 ARID2Q68CP9 1835 aa5.85□□□□□ -1.47
CCDC171-201ENST00000380701 IFITM3Q01628 133 aa5.85□□□□□ -1.47
CCDC171-201ENST00000380701 IGKV1-12A0A0C4DH73 117 aa5.85□□□□□ -1.47
CCDC171-201ENST00000380701 F8VVB4 439 aa5.85□□□□□ -1.47
CCDC171-201ENST00000380701 F8VWA3 439 aa5.85□□□□□ -1.47
CCDC171-201ENST00000380701 LDLRAD4O15165 306 aa5.85□□□□□ -1.47
CCDC171-201ENST00000380701 HOXA3O43365 443 aaPredicted RBP5.85□□□□□ -1.47
CCDC171-201ENST00000380701 WISP1O95388 367 aa5.85□□□□□ -1.47
CCDC171-201ENST00000380701 IGKV1D-12P01611 117 aa5.85□□□□□ -1.47
CCDC171-201ENST00000380701 TCRAP04437 139 aa5.85□□□□□ -1.47
CCDC171-201ENST00000380701 TEX43Q6ZNM6 134 aa5.85□□□□□ -1.47
CCDC171-201ENST00000380701 PRSS33Q8NF86 280 aa5.85□□□□□ -1.47
CCDC171-201ENST00000380701 FGFBP3Q8TAT2 258 aa5.85□□□□□ -1.47
CCDC171-201ENST00000380701 GGTLC1Q9BX51 225 aa5.85□□□□□ -1.47
CCDC171-201ENST00000380701 REG4Q9BYZ8 158 aa5.85□□□□□ -1.47
CCDC171-201ENST00000380701 JPT2Q9H910 190 aa5.85□□□□□ -1.47
CCDC171-201ENST00000380701 ATP5G3P48201 142 aa5.85□□□□□ -1.47
CCDC171-201ENST00000380701 MST1LQ2TV78 715 aa5.85□□□□□ -1.47
CCDC171-201ENST00000380701 FBLN7Q53RD9 439 aa5.85□□□□□ -1.47
CCDC171-201ENST00000380701 ZCCHC24Q8N2G6 241 aaKnown RBP5.85□□□□□ -1.47
CCDC171-201ENST00000380701 PNRC2Q9NPJ4 139 aaKnown RBP5.85□□□□□ -1.47
CCDC171-201ENST00000380701 SRRM4A7MD48 611 aaKnown RBP5.85□□□□□ -1.47
CCDC171-201ENST00000380701 CBLN1P23435 193 aa5.85□□□□□ -1.47
CCDC171-201ENST00000380701 CFPP27918 469 aa5.85□□□□□ -1.47
CCDC171-201ENST00000380701 HGFACQ04756 655 aa5.85□□□□□ -1.47
CCDC171-201ENST00000380701 LY6G6FQ5SQ64 297 aa5.85□□□□□ -1.47
CCDC171-201ENST00000380701 CEP290O15078 2479 aa5.85□□□□□ -1.47
CCDC171-201ENST00000380701 NUP214P35658 2090 aaPredicted RBP5.84□□□□□ -1.47
CCDC171-201ENST00000380701 IGKV1D-17A0A075B6S4 117 aa5.84□□□□□ -1.47
CCDC171-201ENST00000380701 FAM231BA6NCW3 169 aa5.84□□□□□ -1.47
CCDC171-201ENST00000380701 A8MWV9 139 aa5.84□□□□□ -1.47
CCDC171-201ENST00000380701 COL8A2P25067 703 aa5.84□□□□□ -1.47
CCDC171-201ENST00000380701 ERCC8Q13216 396 aa5.84□□□□□ -1.47
CCDC171-201ENST00000380701 LAGE3Q14657 143 aa5.84□□□□□ -1.47
CCDC171-201ENST00000380701 SPXQ9BT56 116 aa5.84□□□□□ -1.47
CCDC171-201ENST00000380701 SHANK2-AS3Q9BTD1 123 aa5.84□□□□□ -1.47
CCDC171-201ENST00000380701 IGLV3-9A0A075B6K5 115 aa5.84□□□□□ -1.47
CCDC171-201ENST00000380701 NPIPB5A8MRT5 1133 aa5.84□□□□□ -1.47
CCDC171-201ENST00000380701 DAD1P61803 113 aa5.84□□□□□ -1.47
CCDC171-201ENST00000380701 TTC32Q5I0X7 151 aa5.84□□□□□ -1.47
CCDC171-201ENST00000380701 PAQR4Q8N4S7 273 aaPredicted RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms