RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 AGMATQ9BSE5 352 aa13.22□□□□□ -0.29
COL2A1-202ENST00000380518 MBNL3Q9NUK0 354 aaKnown RBP13.22□□□□□ -0.29
COL2A1-202ENST00000380518 NHP2Q9NX24 153 aaKnown RBP13.22□□□□□ -0.29
COL2A1-202ENST00000380518 TDGF1P13385 188 aa13.21□□□□□ -0.29
COL2A1-202ENST00000380518 CFAP161Q6P656 301 aa13.21□□□□□ -0.29
COL2A1-202ENST00000380518 CD177Q8N6Q3 437 aa13.21□□□□□ -0.29
COL2A1-202ENST00000380518 MLNRO43193 412 aa13.21□□□□□ -0.29
COL2A1-202ENST00000380518 TMEM200BQ69YZ2 307 aa13.21□□□□□ -0.29
COL2A1-202ENST00000380518 IFI27L1Q96BM0 104 aa13.21□□□□□ -0.29
COL2A1-202ENST00000380518 YAE1D1Q9NRH1 226 aa13.21□□□□□ -0.29
COL2A1-202ENST00000380518 PSG1P11464 419 aa13.21□□□□□ -0.29
COL2A1-202ENST00000380518 LINC01551Q86U37 167 aa13.21□□□□□ -0.29
COL2A1-202ENST00000380518 WDR90Q96KV7 1748 aa13.21□□□□□ -0.3
COL2A1-202ENST00000380518 CREBBPQ92793 2442 aa13.21□□□□□ -0.3
COL2A1-202ENST00000380518 WNK3Q9BYP7 1800 aa13.21□□□□□ -0.3
COL2A1-202ENST00000380518 A0A1B0GWJ7 208 aa13.21□□□□□ -0.3
COL2A1-202ENST00000380518 PMS2P5A8MQ11 134 aa13.21□□□□□ -0.3
COL2A1-202ENST00000380518 OOSP1A8MZH6 123 aa13.21□□□□□ -0.3
COL2A1-202ENST00000380518 CXCL1P09341 107 aa13.21□□□□□ -0.3
COL2A1-202ENST00000380518 GPR179Q6PRD1 2367 aa13.21□□□□□ -0.3
COL2A1-202ENST00000380518 C5orf63A6NC05 138 aa13.2□□□□□ -0.3
COL2A1-202ENST00000380518 RBMY1BA6NDE4 496 aaKnown RBP13.2□□□□□ -0.3
COL2A1-202ENST00000380518 RBMY1EA6NEQ0 496 aaKnown RBP13.2□□□□□ -0.3
COL2A1-202ENST00000380518 LINC01549A6NIU2 74 aa13.2□□□□□ -0.3
COL2A1-202ENST00000380518 NPIPB5A8MRT5 1133 aa13.2□□□□□ -0.3
COL2A1-202ENST00000380518 TMEM178BH3BS89 294 aa13.2□□□□□ -0.3
COL2A1-202ENST00000380518 RBMY1DP0C7P1 496 aaKnown RBP13.2□□□□□ -0.3
COL2A1-202ENST00000380518 RBMY1A1P0DJD3 496 aaKnown RBP13.2□□□□□ -0.3
COL2A1-202ENST00000380518 RBMY1CP0DJD4 496 aa13.2□□□□□ -0.3
COL2A1-202ENST00000380518 HIST3H2BBQ8N257 126 aa13.2□□□□□ -0.3
COL2A1-202ENST00000380518 TRGV11A0A075B6L2 103 aa13.2□□□□□ -0.3
COL2A1-202ENST00000380518 TRAV41A0A0B4J266 112 aa13.2□□□□□ -0.3
COL2A1-202ENST00000380518 TRAV40A0A0B4J280 105 aa13.2□□□□□ -0.3
COL2A1-202ENST00000380518 JMJD8Q96S16 334 aa13.2□□□□□ -0.3
COL2A1-202ENST00000380518 SEPSECSQ9HD40 501 aaKnown RBP13.2□□□□□ -0.3
COL2A1-202ENST00000380518 QRFPP83859 136 aa13.2□□□□□ -0.3
COL2A1-202ENST00000380518 ZNF585BQ52M93 769 aa13.2□□□□□ -0.3
COL2A1-202ENST00000380518 GFI1BQ5VTD9 330 aa13.2□□□□□ -0.3
COL2A1-202ENST00000380518 SPATA31B1PQ5VZV4 182 aa13.2□□□□□ -0.3
COL2A1-202ENST00000380518 CLDN16Q9Y5I7 305 aa13.2□□□□□ -0.3
COL2A1-202ENST00000380518 Q0VFX4 171 aa13.2□□□□□ -0.3
COL2A1-202ENST00000380518 FAM169BQ8N8A8 192 aa13.2□□□□□ -0.3
COL2A1-202ENST00000380518 A0A1B0GV72 72 aa13.19□□□□□ -0.3
COL2A1-202ENST00000380518 HTN3P15516 51 aa13.19□□□□□ -0.3
COL2A1-202ENST00000380518 SIGLEC15Q6ZMC9 328 aa13.19□□□□□ -0.3
COL2A1-202ENST00000380518 TRGV9Q99603 122 aa13.19□□□□□ -0.3
COL2A1-202ENST00000380518 MGST2Q99735 147 aa13.19□□□□□ -0.3
COL2A1-202ENST00000380518 CACNA1HO95180 2353 aa13.19□□□□□ -0.3
COL2A1-202ENST00000380518 IGHV1-3A0A0C4DH29 117 aa13.19□□□□□ -0.3
COL2A1-202ENST00000380518 A0A0G2JMZ2 1700 aa13.19□□□□□ -0.3
COL2A1-202ENST00000380518 LRRC37A2A6NM11 1700 aa13.19□□□□□ -0.3
COL2A1-202ENST00000380518 C15orf32Q32M92 178 aa13.19□□□□□ -0.3
COL2A1-202ENST00000380518 RNF182Q8N6D2 247 aa13.19□□□□□ -0.3
COL2A1-202ENST00000380518 SLC25A39Q9BZJ4 359 aaPredicted RBP13.19□□□□□ -0.3
COL2A1-202ENST00000380518 COL6A6A6NMZ7 2263 aa13.19□□□□□ -0.3
COL2A1-202ENST00000380518 HGFACQ04756 655 aa13.18□□□□□ -0.3
COL2A1-202ENST00000380518 LINC01559Q495D7 138 aa13.18□□□□□ -0.3
COL2A1-202ENST00000380518 Q6ZS49 121 aa13.18□□□□□ -0.3
COL2A1-202ENST00000380518 CADP27708 2225 aa13.18□□□□□ -0.3
COL2A1-202ENST00000380518 AMBPP02760 352 aa13.18□□□□□ -0.3
COL2A1-202ENST00000380518 EFNA4P52798 201 aa13.18□□□□□ -0.3
COL2A1-202ENST00000380518 MINOS1Q5TGZ0 78 aa13.18□□□□□ -0.3
COL2A1-202ENST00000380518 MDS2Q8NDY4 140 aa13.18□□□□□ -0.3
COL2A1-202ENST00000380518 METRNQ9UJH8 293 aa13.18□□□□□ -0.3
COL2A1-202ENST00000380518 MINOS1-NBL1R4GNA1 71 aa13.18□□□□□ -0.3
COL2A1-202ENST00000380518 CACNA1BQ00975 2339 aa13.18□□□□□ -0.3
COL2A1-202ENST00000380518 TPTE2P1Q5T6R2 138 aa13.18□□□□□ -0.3
COL2A1-202ENST00000380518 IGKCP01834 107 aa13.18□□□□□ -0.3
COL2A1-202ENST00000380518 EVI2AP22794 236 aa13.18□□□□□ -0.3
COL2A1-202ENST00000380518 TCRAP04437 139 aa13.17□□□□□ -0.3
COL2A1-202ENST00000380518 Q6P435 159 aa13.17□□□□□ -0.3
COL2A1-202ENST00000380518 RASL11AQ6T310 242 aa13.17□□□□□ -0.3
COL2A1-202ENST00000380518 SCRT1Q9BWW7 348 aa13.17□□□□□ -0.3
COL2A1-202ENST00000380518 LINC00527Q9UJ94 153 aa13.17□□□□□ -0.3
COL2A1-202ENST00000380518 CHTOPQ9Y3Y2 248 aaKnown RBP13.17□□□□□ -0.3
COL2A1-202ENST00000380518 TRAV3A0A0B4J244 114 aa13.17□□□□□ -0.3
COL2A1-202ENST00000380518 PLNP26678 52 aa13.17□□□□□ -0.3
COL2A1-202ENST00000380518 RNF144BQ7Z419 303 aa13.17□□□□□ -0.3
COL2A1-202ENST00000380518 ORAOV1Q8WV07 137 aa13.17□□□□□ -0.3
COL2A1-202ENST00000380518 SMPXQ9UHP9 88 aa13.17□□□□□ -0.3
COL2A1-202ENST00000380518 SRSF4Q08170 494 aaKnown RBP13.17□□□□□ -0.3
COL2A1-202ENST00000380518 EXOC3-AS1Q8N2X6 119 aa13.17□□□□□ -0.3
COL2A1-202ENST00000380518 SLC25A2Q9BXI2 301 aa13.17□□□□□ -0.3
COL2A1-202ENST00000380518 GHRHP01286 108 aa13.16□□□□□ -0.3
COL2A1-202ENST00000380518 LY96Q9Y6Y9 160 aa13.16□□□□□ -0.3
COL2A1-202ENST00000380518 CD33P20138 364 aa13.16□□□□□ -0.3
COL2A1-202ENST00000380518 DERL1Q9BUN8 251 aa13.16□□□□□ -0.3
COL2A1-202ENST00000380518 CD28P10747 220 aa13.16□□□□□ -0.3
COL2A1-202ENST00000380518 B3GALT5-AS1P59052 145 aa13.16□□□□□ -0.3
COL2A1-202ENST00000380518 SPSB3Q6PJ21 355 aa13.16□□□□□ -0.3
COL2A1-202ENST00000380518 FOXL2NBQ6ZUU3 175 aa13.16□□□□□ -0.3
COL2A1-202ENST00000380518 VMO1Q7Z5L0 202 aa13.16□□□□□ -0.3
COL2A1-202ENST00000380518 MS4A6AQ9H2W1 248 aa13.16□□□□□ -0.3
COL2A1-202ENST00000380518 PKDREJQ9NTG1 2253 aa13.16□□□□□ -0.3
COL2A1-202ENST00000380518 IGKV2-40A0A087WW87 121 aaPredicted RBP13.16□□□□□ -0.3
COL2A1-202ENST00000380518 IGKV3D-20A0A0C4DH25 116 aa13.16□□□□□ -0.3
COL2A1-202ENST00000380518 LINC00473A8K010 186 aa13.16□□□□□ -0.3
COL2A1-202ENST00000380518 ZNF815PA8K554 130 aa13.16□□□□□ -0.3
COL2A1-202ENST00000380518 H0YJW9 148 aa13.16□□□□□ -0.3
COL2A1-202ENST00000380518 IGKV2D-40P01614 121 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms