RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 LYL1P12980 280 aa11.57□□□□□ -0.56
SHROOM1-203ENST00000378679 GOLT1AQ6ZVE7 132 aa11.57□□□□□ -0.56
SHROOM1-203ENST00000378679 FA2HQ7L5A8 372 aa11.57□□□□□ -0.56
SHROOM1-203ENST00000378679 A8MWL6 223 aa11.57□□□□□ -0.56
SHROOM1-203ENST00000378679 TMEM208Q9BTX3 173 aa11.57□□□□□ -0.56
SHROOM1-203ENST00000378679 GGTLC1Q9BX51 225 aa11.57□□□□□ -0.56
SHROOM1-203ENST00000378679 LINC00527Q9UJ94 153 aa11.57□□□□□ -0.56
SHROOM1-203ENST00000378679 SHISA9B4DS77 424 aa11.57□□□□□ -0.56
SHROOM1-203ENST00000378679 PRTN3P24158 256 aa11.57□□□□□ -0.56
SHROOM1-203ENST00000378679 ZNF134P52741 427 aa11.57□□□□□ -0.56
SHROOM1-203ENST00000378679 SPATA45Q537H7 98 aa11.57□□□□□ -0.56
SHROOM1-203ENST00000378679 TEX36Q5VZQ5 186 aa11.57□□□□□ -0.56
SHROOM1-203ENST00000378679 AMY1AP04745 511 aa11.57□□□□□ -0.56
SHROOM1-203ENST00000378679 TDGF1P3P51864 188 aa11.57□□□□□ -0.56
SHROOM1-203ENST00000378679 PAFAH1B2P68402 229 aa11.57□□□□□ -0.56
SHROOM1-203ENST00000378679 COX19Q49B96 90 aa11.57□□□□□ -0.56
SHROOM1-203ENST00000378679 BRD3OSQ6XYD6 125 aa11.57□□□□□ -0.56
SHROOM1-203ENST00000378679 CENPVQ7Z7K6 275 aaPredicted RBP11.57□□□□□ -0.56
SHROOM1-203ENST00000378679 A0A1W2PS18 150 aa11.56□□□□□ -0.56
SHROOM1-203ENST00000378679 C15orf62A8K5M9 175 aa11.56□□□□□ -0.56
SHROOM1-203ENST00000378679 HTN1P15515 57 aa11.56□□□□□ -0.56
SHROOM1-203ENST00000378679 FAM106AQ4KMX7 169 aa11.56□□□□□ -0.56
SHROOM1-203ENST00000378679 CENPWQ5EE01 88 aa11.56□□□□□ -0.56
SHROOM1-203ENST00000378679 PRSS3P2Q8NHM4 247 aa11.56□□□□□ -0.56
SHROOM1-203ENST00000378679 HIVEP3Q5T1R4 2406 aa11.56□□□□□ -0.56
SHROOM1-203ENST00000378679 NDUFS7O75251 213 aa11.56□□□□□ -0.56
SHROOM1-203ENST00000378679 LRRK2Q5S007 2527 aa11.56□□□□□ -0.56
SHROOM1-203ENST00000378679 SCO2A0A1W2PP80 73 aa11.56□□□□□ -0.56
SHROOM1-203ENST00000378679 IGHV3-11P01762 117 aa11.56□□□□□ -0.56
SHROOM1-203ENST00000378679 FOLR2P14207 255 aa11.56□□□□□ -0.56
SHROOM1-203ENST00000378679 KLF17Q5JT82 389 aaPredicted RBP11.56□□□□□ -0.56
SHROOM1-203ENST00000378679 TMEM78Q5T7P6 136 aa11.56□□□□□ -0.56
SHROOM1-203ENST00000378679 TEX29Q8N6K0 151 aa11.56□□□□□ -0.56
SHROOM1-203ENST00000378679 M0R1W7 72 aa11.55□□□□□ -0.56
SHROOM1-203ENST00000378679 C2orf83Q53S99 150 aa11.55□□□□□ -0.56
SHROOM1-203ENST00000378679 LEMD1Q68G75 181 aa11.55□□□□□ -0.56
SHROOM1-203ENST00000378679 CLEC19AQ6UXS0 136 aa11.55□□□□□ -0.56
SHROOM1-203ENST00000378679 TMEM219Q86XT9 240 aa11.55□□□□□ -0.56
SHROOM1-203ENST00000378679 FAM19A2Q8N3H0 131 aa11.55□□□□□ -0.56
SHROOM1-203ENST00000378679 DYNLRB2Q8TF09 96 aa11.55□□□□□ -0.56
SHROOM1-203ENST00000378679 MRPL18Q9H0U6 180 aaKnown RBP11.55□□□□□ -0.56
SHROOM1-203ENST00000378679 NCOR1P1Q9H4R4 102 aa11.55□□□□□ -0.56
SHROOM1-203ENST00000378679 SIGLEC9Q9Y336 463 aa11.55□□□□□ -0.56
SHROOM1-203ENST00000378679 IGHV3-66A0A0C4DH42 116 aa11.55□□□□□ -0.56
SHROOM1-203ENST00000378679 DLX6P56179 175 aa11.55□□□□□ -0.56
SHROOM1-203ENST00000378679 ZNF664Q8N3J9 261 aa11.55□□□□□ -0.56
SHROOM1-203ENST00000378679 MBD3L1Q8WWY6 194 aa11.55□□□□□ -0.56
SHROOM1-203ENST00000378679 UFC1Q9Y3C8 167 aa11.55□□□□□ -0.56
SHROOM1-203ENST00000378679 OR2T8A6NH00 312 aa11.55□□□□□ -0.56
SHROOM1-203ENST00000378679 MLANAQ16655 118 aa11.55□□□□□ -0.56
SHROOM1-203ENST00000378679 MSMPQ1L6U9 139 aa11.55□□□□□ -0.56
SHROOM1-203ENST00000378679 F5H697 171 aa11.54□□□□□ -0.56
SHROOM1-203ENST00000378679 HAX1O00165 279 aa11.54□□□□□ -0.56
SHROOM1-203ENST00000378679 RELQ04864 619 aaPredicted RBP11.54□□□□□ -0.56
SHROOM1-203ENST00000378679 TMEM177Q53S58 311 aa11.54□□□□□ -0.56
SHROOM1-203ENST00000378679 SDF2L1Q9HCN8 221 aa11.54□□□□□ -0.56
SHROOM1-203ENST00000378679 TCRBV4S1A1TA0A5B7 111 aa11.54□□□□□ -0.56
SHROOM1-203ENST00000378679 M0QZK8 103 aa11.54□□□□□ -0.56
SHROOM1-203ENST00000378679 GGCTO75223 188 aaKnown RBP11.54□□□□□ -0.56
SHROOM1-203ENST00000378679 RIGQ13278 110 aa11.54□□□□□ -0.56
SHROOM1-203ENST00000378679 CD81P60033 236 aa11.54□□□□□ -0.56
SHROOM1-203ENST00000378679 RPL24P83731 157 aaKnown RBP11.54□□□□□ -0.56
SHROOM1-203ENST00000378679 MINOS1Q5TGZ0 78 aa11.54□□□□□ -0.56
SHROOM1-203ENST00000378679 TMEM256Q8N2U0 113 aa11.54□□□□□ -0.56
SHROOM1-203ENST00000378679 ZNF738Q8NE65 137 aa11.54□□□□□ -0.56
SHROOM1-203ENST00000378679 MINOS1-NBL1R4GNA1 71 aa11.54□□□□□ -0.56
SHROOM1-203ENST00000378679 PYYP10082 97 aa11.53□□□□□ -0.56
SHROOM1-203ENST00000378679 CX3CL1P78423 397 aa11.53□□□□□ -0.56
SHROOM1-203ENST00000378679 RHOGP84095 191 aa11.53□□□□□ -0.56
SHROOM1-203ENST00000378679 C5orf64Q2M2E5 130 aa11.53□□□□□ -0.56
SHROOM1-203ENST00000378679 WNK1Q9H4A3 2382 aa11.53□□□□□ -0.56
SHROOM1-203ENST00000378679 B4DSR2 109 aa11.53□□□□□ -0.56
SHROOM1-203ENST00000378679 RAB9AP51151 201 aa11.53□□□□□ -0.56
SHROOM1-203ENST00000378679 PAX9P55771 341 aa11.53□□□□□ -0.56
SHROOM1-203ENST00000378679 JOSD1Q15040 202 aaPredicted RBP11.53□□□□□ -0.56
SHROOM1-203ENST00000378679 EPG5Q9HCE0 2579 aa11.53□□□□□ -0.56
SHROOM1-203ENST00000378679 SRIP30626 198 aa11.53□□□□□ -0.56
SHROOM1-203ENST00000378679 RPL23P62829 140 aaKnown RBP11.53□□□□□ -0.56
SHROOM1-203ENST00000378679 OOSP1A8MZH6 123 aa11.52□□□□□ -0.56
SHROOM1-203ENST00000378679 ISLRO14498 428 aa11.52□□□□□ -0.56
SHROOM1-203ENST00000378679 VENTXO95231 258 aa11.52□□□□□ -0.56
SHROOM1-203ENST00000378679 PRB4P10163 310 aaPredicted RBP11.52□□□□□ -0.56
SHROOM1-203ENST00000378679 AREGP15514 252 aa11.52□□□□□ -0.56
SHROOM1-203ENST00000378679 MAJINQ3KP22 176 aa11.52□□□□□ -0.56
SHROOM1-203ENST00000378679 TM4SF20Q53R12 229 aa11.52□□□□□ -0.56
SHROOM1-203ENST00000378679 SFRP2Q96HF1 295 aa11.52□□□□□ -0.56
SHROOM1-203ENST00000378679 NAV3Q8IVL0 2385 aa11.52□□□□□ -0.57
SHROOM1-203ENST00000378679 SNAI2O43623 268 aa11.52□□□□□ -0.57
SHROOM1-203ENST00000378679 LHFPL4Q7Z7J7 247 aa11.52□□□□□ -0.57
SHROOM1-203ENST00000378679 RNF5Q99942 180 aa11.52□□□□□ -0.57
SHROOM1-203ENST00000378679 ID1P41134 155 aa11.52□□□□□ -0.57
SHROOM1-203ENST00000378679 SP5Q6BEB4 398 aaPredicted RBP11.52□□□□□ -0.57
SHROOM1-203ENST00000378679 DMRTC2Q8IXT2 367 aaPredicted RBP11.52□□□□□ -0.57
SHROOM1-203ENST00000378679 LBHQ53QV2 105 aaPredicted RBP11.51□□□□□ -0.57
SHROOM1-203ENST00000378679 RNF125Q96EQ8 232 aa11.51□□□□□ -0.57
SHROOM1-203ENST00000378679 MGST2Q99735 147 aa11.51□□□□□ -0.57
SHROOM1-203ENST00000378679 SEPSECSQ9HD40 501 aaKnown RBP11.51□□□□□ -0.57
SHROOM1-203ENST00000378679 A0A0G2JLM5 398 aa11.51□□□□□ -0.57
SHROOM1-203ENST00000378679 SAA4P35542 130 aa11.51□□□□□ -0.57
SHROOM1-203ENST00000378679 DSCR9P59020 149 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms