RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 DEFB109BQ30KR1 87 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 TRGV11A0A075B6L2 103 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 DEFB108AA8MXU0 73 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 PLAURQ03405 335 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 ODF3Q96PU9 254 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 RAXQ9Y2V3 346 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 SPANXB1Q9NS25 103 aaPredicted RBP4.02□□□□□ -1.77
PCDH9-201ENST00000377861 UBR3Q6ZT12 1888 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 DLX4Q92988 240 aaPredicted RBP4.02□□□□□ -1.77
PCDH9-201ENST00000377861 SPAG17Q6Q759 2223 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 TRBV20OR9-2A0A075B6H5 130 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 C3orf79P0CE67 100 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 WNT5AP41221 380 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 MRPL16Q9NX20 251 aaKnown RBP4.02□□□□□ -1.77
PCDH9-201ENST00000377861 IGKV1D-43A0A0B4J1Z2 117 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 APOMO95445 188 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 IGHV1-2P23083 117 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 GATD1Q8NB37 220 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 ZNF502Q8TBZ5 544 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 NINQ8N4C6 2090 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 C15orf65H3BRN8 121 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 ADCYAP1P18509 176 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 TMEM86BQ8N661 226 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 LCN12Q6JVE5 192 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 Q8N8P6 123 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 SRSF3P84103 164 aaKnown RBP4.02□□□□□ -1.77
PCDH9-201ENST00000377861 OR8A1Q8NGG7 326 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 ZNF580Q9UK33 172 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 PRSS2P07478 247 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 SRD5A1P18405 259 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 PRSS47A8MTI9 375 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 KLK10O43240 276 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 KLRB1Q12918 225 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 WNT10AQ9GZT5 417 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 PKIGQ9Y2B9 76 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 SAA2P0DJI9 122 aaPredicted RBP4.02□□□□□ -1.77
PCDH9-201ENST00000377861 TMEM126AQ9H061 195 aa4.02□□□□□ -1.77
PCDH9-201ENST00000377861 EIF4EBP1Q13541 118 aaPredicted RBP4.01□□□□□ -1.77
PCDH9-201ENST00000377861 MAFAQ8NHW3 353 aaPredicted RBP4.01□□□□□ -1.77
PCDH9-201ENST00000377861 PTPRFP10586 1907 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 PSMB2P49721 201 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 YPEL4Q96NS1 127 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 GRIFINA4D1Z8 144 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 ZFAND6Q6FIF0 208 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 IGHV1-8P0DP01 117 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 SP5Q6BEB4 398 aaPredicted RBP4.01□□□□□ -1.77
PCDH9-201ENST00000377861 Q6ZRM9 215 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 SPACA3Q8IXA5 215 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 CCL13Q99616 98 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 MLST8Q9BVC4 326 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 GEMIN7Q9H840 131 aaKnown RBP4.01□□□□□ -1.77
PCDH9-201ENST00000377861 A0A1B0GV90 55 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 APOHP02749 345 aaPredicted RBP4.01□□□□□ -1.77
PCDH9-201ENST00000377861 TMEM256Q8N2U0 113 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 UNQ5815/PRO19632Q6UWF5 114 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 IGHV1-3A0A0C4DH29 117 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 ADIPOQQ15848 244 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 GOLT1AQ6ZVE7 132 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 PPDPFLQ8WWR9 84 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 C3orf80F5H4A9 247 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 LINC01565O15544 149 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 PAX8Q06710 450 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 IFI27P40305 119 aaPredicted RBP4.01□□□□□ -1.77
PCDH9-201ENST00000377861 RFPL3SP0C7P2 107 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 CCL8P80075 99 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 FOXI2Q6ZQN5 318 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 PRNTQ86SH4 94 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 PSG1P11464 419 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 TNFRSF18Q9Y5U5 241 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 IGHG4P01861 327 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 PLA2G2CQ5R387 149 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 ERG28Q9UKR5 140 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 NDUFA4O00483 81 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 TIMM23O14925 209 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 NUP214P35658 2090 aaPredicted RBP4.01□□□□□ -1.77
PCDH9-201ENST00000377861 TMEM101Q96IK0 257 aa4.01□□□□□ -1.77
PCDH9-201ENST00000377861 PATE4P0C8F1 98 aa4□□□□□ -1.77
PCDH9-201ENST00000377861 TMEM95Q3KNT9 176 aa4□□□□□ -1.77
PCDH9-201ENST00000377861 DCTN5Q9BTE1 182 aa4□□□□□ -1.77
PCDH9-201ENST00000377861 DAZ1Q9NQZ3 744 aaKnown RBP4□□□□□ -1.77
PCDH9-201ENST00000377861 F5H697 171 aa4□□□□□ -1.77
PCDH9-201ENST00000377861 C16orf92Q96LL3 132 aa4□□□□□ -1.77
PCDH9-201ENST00000377861 WNK2Q9Y3S1 2297 aa4□□□□□ -1.77
PCDH9-201ENST00000377861 IGHV4-4A0A075B6R2 117 aa4□□□□□ -1.77
PCDH9-201ENST00000377861 MRGPRG-AS1Q2M3A8 158 aa4□□□□□ -1.77
PCDH9-201ENST00000377861 PROK2Q9HC23 129 aa4□□□□□ -1.77
PCDH9-201ENST00000377861 RNASE2P10153 161 aaKnown RBP4□□□□□ -1.77
PCDH9-201ENST00000377861 PGLYRP4Q96LB8 373 aa4□□□□□ -1.77
PCDH9-201ENST00000377861 CNFNQ9BYD5 112 aa4□□□□□ -1.77
PCDH9-201ENST00000377861 NCR2O95944 276 aa4□□□□□ -1.77
PCDH9-201ENST00000377861 RHOHQ15669 191 aa4□□□□□ -1.77
PCDH9-201ENST00000377861 URB1O60287 2271 aaKnown RBP4□□□□□ -1.77
PCDH9-201ENST00000377861 PSPNO60542 156 aa4□□□□□ -1.77
PCDH9-201ENST00000377861 TPTE2P1Q5T6R2 138 aa4□□□□□ -1.77
PCDH9-201ENST00000377861 TRAV13-2A0A0B4J235 113 aa4□□□□□ -1.77
PCDH9-201ENST00000377861 CARD19Q96LW7 228 aa4□□□□□ -1.77
PCDH9-201ENST00000377861 FBXL7Q9UJT9 491 aa4□□□□□ -1.77
PCDH9-201ENST00000377861 TRAV2A0A0B4J234 112 aa4□□□□□ -1.77
PCDH9-201ENST00000377861 IGHV4OR15-8A0A075B7B6 117 aa4□□□□□ -1.77
PCDH9-201ENST00000377861 A0A087WW49 117 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms