RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 NPIPB3Q92617 1050 aa15.32■□□□□ 0.04
VSX1-201ENST00000376707 ACY3Q96HD9 319 aa15.32■□□□□ 0.04
VSX1-201ENST00000376707 DEDDO75618 318 aa15.31■□□□□ 0.04
VSX1-201ENST00000376707 GIG44P09565 113 aaPredicted RBP15.31■□□□□ 0.04
VSX1-201ENST00000376707 SLC25A6P12236 298 aa15.31■□□□□ 0.04
VSX1-201ENST00000376707 PSMG4Q5JS54 123 aa15.31■□□□□ 0.04
VSX1-201ENST00000376707 Q8NAQ8 132 aa15.31■□□□□ 0.04
VSX1-201ENST00000376707 OR1S1Q8NH92 325 aa15.31■□□□□ 0.04
VSX1-201ENST00000376707 C2CD4CQ8TF44 421 aa15.31■□□□□ 0.04
VSX1-201ENST00000376707 GLMPQ8WWB7 406 aa15.31■□□□□ 0.04
VSX1-201ENST00000376707 IGHV4-28A0A0C4DH34 117 aa15.3■□□□□ 0.04
VSX1-201ENST00000376707 TOMM40O96008 361 aa15.3■□□□□ 0.04
VSX1-201ENST00000376707 RD3LP0DJH9 198 aa15.3■□□□□ 0.04
VSX1-201ENST00000376707 C4BPBP20851 252 aa15.3■□□□□ 0.04
VSX1-201ENST00000376707 USF2Q15853 346 aaPredicted RBP15.3■□□□□ 0.04
VSX1-201ENST00000376707 MIFP14174 115 aa15.29■□□□□ 0.04
VSX1-201ENST00000376707 GPX4P36969 197 aaPredicted RBP15.29■□□□□ 0.04
VSX1-201ENST00000376707 SPANXN2Q5MJ10 180 aa15.29■□□□□ 0.04
VSX1-201ENST00000376707 SRRQ9GZT4 340 aa15.29■□□□□ 0.04
VSX1-201ENST00000376707 HRH4Q9H3N8 390 aa15.29■□□□□ 0.04
VSX1-201ENST00000376707 FAM90A26D6RGX4 464 aa15.28■□□□□ 0.04
VSX1-201ENST00000376707 VAMP1P23763 118 aa15.28■□□□□ 0.04
VSX1-201ENST00000376707 TCTAP57738 103 aa15.28■□□□□ 0.04
VSX1-201ENST00000376707 SNRPD3P62318 126 aaKnown RBP15.28■□□□□ 0.04
VSX1-201ENST00000376707 RAB40CQ96S21 281 aa15.28■□□□□ 0.04
VSX1-201ENST00000376707 CLEC5AQ9NY25 188 aa15.28■□□□□ 0.04
VSX1-201ENST00000376707 TMED3Q9Y3Q3 217 aa15.28■□□□□ 0.04
VSX1-201ENST00000376707 ZNF705EA8MWA4 302 aaPredicted RBP15.27■□□□□ 0.04
VSX1-201ENST00000376707 C11orf94C9JXX5 98 aa15.27■□□□□ 0.04
VSX1-201ENST00000376707 SFT2D2O95562 160 aa15.27■□□□□ 0.04
VSX1-201ENST00000376707 RBMY1A1P0DJD3 496 aaKnown RBP15.27■□□□□ 0.04
VSX1-201ENST00000376707 RBMY1CP0DJD4 496 aa15.27■□□□□ 0.04
VSX1-201ENST00000376707 PSG1P11464 419 aa15.27■□□□□ 0.04
VSX1-201ENST00000376707 PPP1R1AQ13522 171 aa15.27■□□□□ 0.04
VSX1-201ENST00000376707 RBMY1FQ15415 496 aaKnown RBP15.27■□□□□ 0.04
VSX1-201ENST00000376707 CENPSQ8N2Z9 138 aa15.27■□□□□ 0.04
VSX1-201ENST00000376707 NRN1Q9NPD7 142 aa15.27■□□□□ 0.04
VSX1-201ENST00000376707 IGLL5B9A064 214 aa15.26■□□□□ 0.03
VSX1-201ENST00000376707 BUB3O43684 328 aa15.26■□□□□ 0.03
VSX1-201ENST00000376707 GAMTQ14353 236 aa15.26■□□□□ 0.03
VSX1-201ENST00000376707 SIGLEC15Q6ZMC9 328 aa15.26■□□□□ 0.03
VSX1-201ENST00000376707 OR51G1Q8NGK1 321 aa15.26■□□□□ 0.03
VSX1-201ENST00000376707 TBC1D24Q9ULP9 559 aa15.26■□□□□ 0.03
VSX1-201ENST00000376707 X6R8D5 127 aa15.26■□□□□ 0.03
VSX1-201ENST00000376707 HLA-DMBP28068 263 aa15.25■□□□□ 0.03
VSX1-201ENST00000376707 UBE2MP61081 183 aaKnown RBP15.25■□□□□ 0.03
VSX1-201ENST00000376707 NUTF2P61970 127 aaKnown RBP15.25■□□□□ 0.03
VSX1-201ENST00000376707 PBDC1Q9BVG4 233 aa15.25■□□□□ 0.03
VSX1-201ENST00000376707 SEPSECSQ9HD40 501 aaKnown RBP15.25■□□□□ 0.03
VSX1-201ENST00000376707 PFDN2Q9UHV9 154 aa15.25■□□□□ 0.03
VSX1-201ENST00000376707 IGKV1D-37A0A075B6S9 117 aa15.24■□□□□ 0.03
VSX1-201ENST00000376707 ZFP92A6NM28 416 aa15.24■□□□□ 0.03
VSX1-201ENST00000376707 NUP62P37198 522 aaPredicted RBP15.24■□□□□ 0.03
VSX1-201ENST00000376707 CSNK1G2-AS1Q8NCQ2 148 aa15.24■□□□□ 0.03
VSX1-201ENST00000376707 RNF125Q96EQ8 232 aa15.24■□□□□ 0.03
VSX1-201ENST00000376707 SLC35E1Q96K37 410 aa15.24■□□□□ 0.03
VSX1-201ENST00000376707 C1QTNF4Q9BXJ3 329 aa15.24■□□□□ 0.03
VSX1-201ENST00000376707 KMT2AQ03164 3969 aa15.24■□□□□ 0.03
VSX1-201ENST00000376707 NAP1L6A6NFF2 107 aa15.23■□□□□ 0.03
VSX1-201ENST00000376707 MED6O75586 246 aa15.23■□□□□ 0.03
VSX1-201ENST00000376707 RAB11AP62491 216 aa15.23■□□□□ 0.03
VSX1-201ENST00000376707 BAK1Q16611 211 aa15.23■□□□□ 0.03
VSX1-201ENST00000376707 CIB3Q96Q77 187 aaPredicted RBP15.23■□□□□ 0.03
VSX1-201ENST00000376707 AGRNO00468 2067 aa15.22■□□□□ 0.03
VSX1-201ENST00000376707 ELOA3CA0A087WX78 387 aaPredicted RBP15.22■□□□□ 0.03
VSX1-201ENST00000376707 NDUFB6O95139 128 aa15.22■□□□□ 0.03
VSX1-201ENST00000376707 IAPPP10997 89 aa15.22■□□□□ 0.03
VSX1-201ENST00000376707 ZNF90Q03938 601 aa15.22■□□□□ 0.03
VSX1-201ENST00000376707 TRIQKQ629K1 86 aa15.22■□□□□ 0.03
VSX1-201ENST00000376707 OR8G2PQ6IF36 304 aa15.22■□□□□ 0.03
VSX1-201ENST00000376707 Q6ZTC4 211 aa15.22■□□□□ 0.03
VSX1-201ENST00000376707 APLNQ9ULZ1 77 aa15.22■□□□□ 0.03
VSX1-201ENST00000376707 TRAV10A0A0B4J240 114 aa15.21■□□□□ 0.03
VSX1-201ENST00000376707 H3BMM0 161 aa15.21■□□□□ 0.03
VSX1-201ENST00000376707 SYNGR2O43760 224 aa15.21■□□□□ 0.03
VSX1-201ENST00000376707 FABP1P07148 127 aa15.21■□□□□ 0.03
VSX1-201ENST00000376707 HOXB5P09067 269 aa15.21■□□□□ 0.03
VSX1-201ENST00000376707 PRR20EP86478 221 aa15.21■□□□□ 0.03
VSX1-201ENST00000376707 PRR20CP86479 221 aa15.21■□□□□ 0.03
VSX1-201ENST00000376707 PRR20DP86480 221 aa15.21■□□□□ 0.03
VSX1-201ENST00000376707 PRR20BP86481 221 aa15.21■□□□□ 0.03
VSX1-201ENST00000376707 PRR20AP86496 221 aa15.21■□□□□ 0.03
VSX1-201ENST00000376707 GGNBP1Q5YKI7 109 aa15.21■□□□□ 0.03
VSX1-201ENST00000376707 SDHCQ99643 169 aaPredicted RBP15.21■□□□□ 0.03
VSX1-201ENST00000376707 XCL2Q9UBD3 114 aa15.21■□□□□ 0.03
VSX1-201ENST00000376707 C9orf170A2RU37 121 aa15.2■□□□□ 0.02
VSX1-201ENST00000376707 PRSS46E5RG02 174 aa15.2■□□□□ 0.02
VSX1-201ENST00000376707 INPP1P49441 399 aa15.2■□□□□ 0.02
VSX1-201ENST00000376707 RPP30P78346 268 aaKnown RBP15.2■□□□□ 0.02
VSX1-201ENST00000376707 TRGV9Q99603 122 aa15.2■□□□□ 0.02
VSX1-201ENST00000376707 IGKV1OR2-108A0A075B7D4 117 aa15.19■□□□□ 0.02
VSX1-201ENST00000376707 HLA-DRB4P13762 266 aa15.19■□□□□ 0.02
VSX1-201ENST00000376707 NKX2-1P43699 371 aaPredicted RBP15.19■□□□□ 0.02
VSX1-201ENST00000376707 LYZP61626 148 aa15.19■□□□□ 0.02
VSX1-201ENST00000376707 THAP8Q8NA92 274 aa15.19■□□□□ 0.02
VSX1-201ENST00000376707 MAGT1Q9H0U3 335 aa15.19■□□□□ 0.02
VSX1-201ENST00000376707 PAIP2BQ9ULR5 123 aaKnown RBP15.19■□□□□ 0.02
VSX1-201ENST00000376707 HLA-DRB4X5D2U9 266 aa15.19■□□□□ 0.02
VSX1-201ENST00000376707 SNRPGP15A8MWD9 76 aa15.18■□□□□ 0.02
VSX1-201ENST00000376707 C1orf194Q5T5A4 169 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms