RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 SIGMAR1Q99720 223 aa17.41■□□□□ 0.38
TGFBR1-202ENST00000374994 GFRA4Q9GZZ7 299 aa17.41■□□□□ 0.38
TGFBR1-202ENST00000374994 SYS1-DBNDD2H3BUS1 97 aa17.4■□□□□ 0.38
TGFBR1-202ENST00000374994 FAM71F2Q6NXP2 309 aa17.4■□□□□ 0.38
TGFBR1-202ENST00000374994 HEATR5BQ9P2D3 2071 aa17.4■□□□□ 0.38
TGFBR1-202ENST00000374994 TRAV3A0A0B4J244 114 aa17.4■□□□□ 0.38
TGFBR1-202ENST00000374994 IGKV1-6A0A0C4DH72 117 aa17.4■□□□□ 0.38
TGFBR1-202ENST00000374994 IL15RAQ13261 267 aa17.4■□□□□ 0.38
TGFBR1-202ENST00000374994 LY6EQ16553 131 aa17.4■□□□□ 0.38
TGFBR1-202ENST00000374994 SUMO2P61956 95 aaKnown RBP17.4■□□□□ 0.38
TGFBR1-202ENST00000374994 SAMD5Q5TGI4 173 aa17.4■□□□□ 0.38
TGFBR1-202ENST00000374994 MRAP2Q96G30 205 aa17.4■□□□□ 0.38
TGFBR1-202ENST00000374994 SLC25A39Q9BZJ4 359 aaPredicted RBP17.4■□□□□ 0.38
TGFBR1-202ENST00000374994 DMRTA2Q96SC8 542 aa17.39■□□□□ 0.38
TGFBR1-202ENST00000374994 HOXA3O43365 443 aaPredicted RBP17.39■□□□□ 0.37
TGFBR1-202ENST00000374994 CRIM1Q9NZV1 1036 aa17.39■□□□□ 0.37
TGFBR1-202ENST00000374994 IGHV3-49A0A0A0MS15 119 aa17.39■□□□□ 0.37
TGFBR1-202ENST00000374994 KLRB1Q12918 225 aa17.38■□□□□ 0.37
TGFBR1-202ENST00000374994 IGHV3-66A0A0C4DH42 116 aa17.38■□□□□ 0.37
TGFBR1-202ENST00000374994 C10orf126Q8N4M7 172 aa17.38■□□□□ 0.37
TGFBR1-202ENST00000374994 EREGO14944 169 aa17.38■□□□□ 0.37
TGFBR1-202ENST00000374994 PAX9P55771 341 aa17.38■□□□□ 0.37
TGFBR1-202ENST00000374994 RALGAPA1Q6GYQ0 2036 aa17.38■□□□□ 0.37
TGFBR1-202ENST00000374994 PSG1P11464 419 aa17.38■□□□□ 0.37
TGFBR1-202ENST00000374994 TOMM40O96008 361 aa17.38■□□□□ 0.37
TGFBR1-202ENST00000374994 C20orf204Q6ZNR8 217 aa17.38■□□□□ 0.37
TGFBR1-202ENST00000374994 POLR3KQ9Y2Y1 108 aaPredicted RBP17.38■□□□□ 0.37
TGFBR1-202ENST00000374994 E9PLN8 166 aa17.38■□□□□ 0.37
TGFBR1-202ENST00000374994 FAM231BA6NCW3 169 aa17.37■□□□□ 0.37
TGFBR1-202ENST00000374994 CD5LO43866 347 aa17.37■□□□□ 0.37
TGFBR1-202ENST00000374994 YPEL3P61236 119 aaPredicted RBP17.37■□□□□ 0.37
TGFBR1-202ENST00000374994 CHTOPQ9Y3Y2 248 aaKnown RBP17.37■□□□□ 0.37
TGFBR1-202ENST00000374994 C5orf24Q7Z6I8 188 aa17.37■□□□□ 0.37
TGFBR1-202ENST00000374994 LYPD6BQ8NI32 183 aa17.37■□□□□ 0.37
TGFBR1-202ENST00000374994 TSC2P49815 1807 aa17.37■□□□□ 0.37
TGFBR1-202ENST00000374994 TSPAN13O95857 204 aa17.37■□□□□ 0.37
TGFBR1-202ENST00000374994 RNASE6Q93091 150 aaKnown RBP17.37■□□□□ 0.37
TGFBR1-202ENST00000374994 VKORC1Q9BQB6 163 aa17.36■□□□□ 0.37
TGFBR1-202ENST00000374994 H0YJW9 148 aa17.36■□□□□ 0.37
TGFBR1-202ENST00000374994 OVOL1O14753 267 aa17.36■□□□□ 0.37
TGFBR1-202ENST00000374994 MPV17L2Q567V2 206 aa17.36■□□□□ 0.37
TGFBR1-202ENST00000374994 C10orf55Q5SWW7 151 aa17.36■□□□□ 0.37
TGFBR1-202ENST00000374994 SDK2Q58EX2 2172 aa17.36■□□□□ 0.37
TGFBR1-202ENST00000374994 SLC25A15Q9Y619 301 aa17.36■□□□□ 0.37
TGFBR1-202ENST00000374994 TIMM23O14925 209 aa17.36■□□□□ 0.37
TGFBR1-202ENST00000374994 LMO1P25800 156 aa17.36■□□□□ 0.37
TGFBR1-202ENST00000374994 Q0VFX4 171 aa17.36■□□□□ 0.37
TGFBR1-202ENST00000374994 KLF2Q9Y5W3 355 aaPredicted RBP17.36■□□□□ 0.37
TGFBR1-202ENST00000374994 OOSP1A8MZH6 123 aa17.35■□□□□ 0.37
TGFBR1-202ENST00000374994 RNASE2P10153 161 aaKnown RBP17.35■□□□□ 0.37
TGFBR1-202ENST00000374994 IFI27P40305 119 aaPredicted RBP17.35■□□□□ 0.37
TGFBR1-202ENST00000374994 VOPP1Q96AW1 172 aa17.35■□□□□ 0.37
TGFBR1-202ENST00000374994 METRNQ9UJH8 293 aa17.35■□□□□ 0.37
TGFBR1-202ENST00000374994 LCN12Q6JVE5 192 aa17.35■□□□□ 0.37
TGFBR1-202ENST00000374994 D6R8Y8 96 aa17.35■□□□□ 0.37
TGFBR1-202ENST00000374994 ATP5J2P56134 94 aa17.35■□□□□ 0.37
TGFBR1-202ENST00000374994 GAGE13Q4V321 117 aa17.35■□□□□ 0.37
TGFBR1-202ENST00000374994 LILRA1O75019 489 aa17.35■□□□□ 0.37
TGFBR1-202ENST00000374994 RNASE4P34096 147 aaKnown RBP17.35■□□□□ 0.37
TGFBR1-202ENST00000374994 LAGE3Q14657 143 aa17.35■□□□□ 0.37
TGFBR1-202ENST00000374994 CT83Q5H943 113 aa17.35■□□□□ 0.37
TGFBR1-202ENST00000374994 IGHV1-8P0DP01 117 aa17.35■□□□□ 0.37
TGFBR1-202ENST00000374994 GUSBP1Q15486 140 aa17.34■□□□□ 0.37
TGFBR1-202ENST00000374994 ZNF492Q9P255 531 aa17.34■□□□□ 0.37
TGFBR1-202ENST00000374994 CACNA1DQ01668 2161 aa17.34■□□□□ 0.37
TGFBR1-202ENST00000374994 PMS2P5A8MQ11 134 aa17.34■□□□□ 0.37
TGFBR1-202ENST00000374994 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.34■□□□□ 0.37
TGFBR1-202ENST00000374994 RHOGP84095 191 aa17.34■□□□□ 0.37
TGFBR1-202ENST00000374994 MDS2Q8NDY4 140 aa17.34■□□□□ 0.37
TGFBR1-202ENST00000374994 TMEM101Q96IK0 257 aa17.34■□□□□ 0.37
TGFBR1-202ENST00000374994 BMPERQ8N8U9 685 aa17.34■□□□□ 0.37
TGFBR1-202ENST00000374994 NCOR1P1Q9H4R4 102 aa17.34■□□□□ 0.37
TGFBR1-202ENST00000374994 YAE1D1Q9NRH1 226 aa17.34■□□□□ 0.37
TGFBR1-202ENST00000374994 ZNF329Q86UD4 541 aa17.33■□□□□ 0.37
TGFBR1-202ENST00000374994 IGHV2-26A0A0B4J1V2 119 aa17.33■□□□□ 0.37
TGFBR1-202ENST00000374994 ZNF815PA8K554 130 aa17.33■□□□□ 0.37
TGFBR1-202ENST00000374994 SELLP14151 372 aa17.33■□□□□ 0.36
TGFBR1-202ENST00000374994 LYZL1Q6UWQ5 148 aa17.33■□□□□ 0.36
TGFBR1-202ENST00000374994 TMEM200BQ69YZ2 307 aa17.33■□□□□ 0.36
TGFBR1-202ENST00000374994 CASP8AP2Q9UKL3 1982 aa17.33■□□□□ 0.36
TGFBR1-202ENST00000374994 IGKV1D-17A0A075B6S4 117 aa17.32■□□□□ 0.36
TGFBR1-202ENST00000374994 IGHV3OR16-8A0A075B7F1 116 aa17.32■□□□□ 0.36
TGFBR1-202ENST00000374994 MMP23AO75900 390 aa17.32■□□□□ 0.36
TGFBR1-202ENST00000374994 MYOD1P15172 320 aa17.32■□□□□ 0.36
TGFBR1-202ENST00000374994 SCRT1Q9BWW7 348 aa17.32■□□□□ 0.36
TGFBR1-202ENST00000374994 A8MWV9 139 aa17.32■□□□□ 0.36
TGFBR1-202ENST00000374994 MLNRO43193 412 aa17.32■□□□□ 0.36
TGFBR1-202ENST00000374994 BCL6BQ8N143 479 aaPredicted RBP17.32■□□□□ 0.36
TGFBR1-202ENST00000374994 APC2O95996 2303 aa17.32■□□□□ 0.36
TGFBR1-202ENST00000374994 IGHV3OR16-12A0A075B7B8 117 aa17.32■□□□□ 0.36
TGFBR1-202ENST00000374994 CSRP1P21291 193 aaKnown RBP17.32■□□□□ 0.36
TGFBR1-202ENST00000374994 SRSF8Q9BRL6 282 aaKnown RBP17.32■□□□□ 0.36
TGFBR1-202ENST00000374994 SNHG12Q9BXW3 62 aa17.32■□□□□ 0.36
TGFBR1-202ENST00000374994 PSG3Q16557 428 aa17.31■□□□□ 0.36
TGFBR1-202ENST00000374994 LIME1Q9H400 295 aa17.31■□□□□ 0.36
TGFBR1-202ENST00000374994 VWA8A3KMH1 1905 aa17.31■□□□□ 0.36
TGFBR1-202ENST00000374994 KLF17Q5JT82 389 aaPredicted RBP17.31■□□□□ 0.36
TGFBR1-202ENST00000374994 ABHD17AQ96GS6 310 aa17.31■□□□□ 0.36
TGFBR1-202ENST00000374994 DUSP14O95147 198 aaKnown RBP17.31■□□□□ 0.36
TGFBR1-202ENST00000374994 ZNF726P1Q15940 193 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms