RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 PRR31Q5SQ13 230 aa14.24□□□□□ -0.13
PTPRU-202ENST00000373779 OR11H1Q8NG94 326 aa14.24□□□□□ -0.13
PTPRU-202ENST00000373779 OR11H2Q8NH07 326 aa14.24□□□□□ -0.13
PTPRU-202ENST00000373779 TRGV9Q99603 122 aa14.24□□□□□ -0.13
PTPRU-202ENST00000373779 ITGB1BP1O14713 200 aa14.24□□□□□ -0.13
PTPRU-202ENST00000373779 HBDP02042 147 aa14.24□□□□□ -0.13
PTPRU-202ENST00000373779 IGHV3OR16-8A0A075B7F1 116 aa14.24□□□□□ -0.13
PTPRU-202ENST00000373779 MLANAQ16655 118 aa14.24□□□□□ -0.13
PTPRU-202ENST00000373779 SYT8Q8NBV8 401 aa14.24□□□□□ -0.13
PTPRU-202ENST00000373779 ABHD17AQ96GS6 310 aa14.24□□□□□ -0.13
PTPRU-202ENST00000373779 C20orf144Q9BQM9 153 aa14.24□□□□□ -0.13
PTPRU-202ENST00000373779 ICE1Q9Y2F5 2266 aa14.24□□□□□ -0.13
PTPRU-202ENST00000373779 CDKN1AP38936 164 aa14.23□□□□□ -0.13
PTPRU-202ENST00000373779 DPF1Q92782 380 aa14.23□□□□□ -0.13
PTPRU-202ENST00000373779 VDAC2P45880 294 aaPredicted RBP14.23□□□□□ -0.13
PTPRU-202ENST00000373779 IGHV3-49A0A0A0MS15 119 aa14.23□□□□□ -0.13
PTPRU-202ENST00000373779 IGKV1-16P04430 117 aa14.23□□□□□ -0.13
PTPRU-202ENST00000373779 ZNF329Q86UD4 541 aa14.23□□□□□ -0.13
PTPRU-202ENST00000373779 SNHG12Q9BXW3 62 aa14.23□□□□□ -0.13
PTPRU-202ENST00000373779 TMEM14BQ9NUH8 114 aa14.23□□□□□ -0.13
PTPRU-202ENST00000373779 SPCS1Q9Y6A9 102 aa14.23□□□□□ -0.13
PTPRU-202ENST00000373779 PSG1P11464 419 aa14.22□□□□□ -0.13
PTPRU-202ENST00000373779 LEPP41159 167 aa14.22□□□□□ -0.13
PTPRU-202ENST00000373779 EBLN2Q6P2I7 272 aa14.22□□□□□ -0.13
PTPRU-202ENST00000373779 MS4A6AQ9H2W1 248 aa14.22□□□□□ -0.13
PTPRU-202ENST00000373779 H3BUT2 72 aa14.22□□□□□ -0.13
PTPRU-202ENST00000373779 DKK1O94907 266 aa14.22□□□□□ -0.13
PTPRU-202ENST00000373779 SCRT1Q9BWW7 348 aa14.22□□□□□ -0.13
PTPRU-202ENST00000373779 TSPOP30536 169 aa14.22□□□□□ -0.13
PTPRU-202ENST00000373779 EXOC3-AS1Q8N2X6 119 aa14.22□□□□□ -0.13
PTPRU-202ENST00000373779 TTC9CQ8N5M4 171 aa14.22□□□□□ -0.13
PTPRU-202ENST00000373779 RNASE6Q93091 150 aaKnown RBP14.22□□□□□ -0.13
PTPRU-202ENST00000373779 TMPRSS3P57727 454 aa14.22□□□□□ -0.13
PTPRU-202ENST00000373779 YPEL3P61236 119 aaPredicted RBP14.22□□□□□ -0.13
PTPRU-202ENST00000373779 ZNF114Q8NC26 417 aa14.22□□□□□ -0.13
PTPRU-202ENST00000373779 SLC25A39Q9BZJ4 359 aaPredicted RBP14.22□□□□□ -0.13
PTPRU-202ENST00000373779 FABP5P3A8MUU1 101 aa14.21□□□□□ -0.13
PTPRU-202ENST00000373779 IGHV1-8P0DP01 117 aa14.21□□□□□ -0.13
PTPRU-202ENST00000373779 NEUROG1Q92886 237 aa14.21□□□□□ -0.13
PTPRU-202ENST00000373779 ESPL1Q14674 2120 aa14.21□□□□□ -0.13
PTPRU-202ENST00000373779 CACNG7P62955 275 aa14.21□□□□□ -0.13
PTPRU-202ENST00000373779 LINC00479Q96M42 142 aa14.21□□□□□ -0.13
PTPRU-202ENST00000373779 IGHV2-26A0A0B4J1V2 119 aa14.21□□□□□ -0.14
PTPRU-202ENST00000373779 FAM169BQ8N8A8 192 aa14.21□□□□□ -0.14
PTPRU-202ENST00000373779 TMEM178BH3BS89 294 aa14.2□□□□□ -0.14
PTPRU-202ENST00000373779 TIMM23O14925 209 aa14.2□□□□□ -0.14
PTPRU-202ENST00000373779 CDPF1Q6NVV7 123 aa14.2□□□□□ -0.14
PTPRU-202ENST00000373779 OR4X2Q8NGF9 303 aa14.2□□□□□ -0.14
PTPRU-202ENST00000373779 FER1L5A0AVI2 2057 aa14.2□□□□□ -0.14
PTPRU-202ENST00000373779 Q6ZR03 302 aa14.2□□□□□ -0.14
PTPRU-202ENST00000373779 TMEM190Q8WZ59 177 aa14.2□□□□□ -0.14
PTPRU-202ENST00000373779 MBD3L4A6NDZ8 208 aaPredicted RBP14.2□□□□□ -0.14
PTPRU-202ENST00000373779 MBD3L3A6NE82 208 aaPredicted RBP14.2□□□□□ -0.14
PTPRU-202ENST00000373779 MBD3L5A6NJ08 208 aaPredicted RBP14.2□□□□□ -0.14
PTPRU-202ENST00000373779 M0R381 172 aa14.2□□□□□ -0.14
PTPRU-202ENST00000373779 MBD3L2Q8NHZ7 208 aaPredicted RBP14.2□□□□□ -0.14
PTPRU-202ENST00000373779 PMS2P5A8MQ11 134 aa14.2□□□□□ -0.14
PTPRU-202ENST00000373779 WNT2P09544 360 aa14.2□□□□□ -0.14
PTPRU-202ENST00000373779 KRTAP27-1Q3LI81 207 aa14.2□□□□□ -0.14
PTPRU-202ENST00000373779 LYNX1G3V0Z9 82 aa14.2□□□□□ -0.14
PTPRU-202ENST00000373779 LYNX1P0DP58 116 aa14.2□□□□□ -0.14
PTPRU-202ENST00000373779 CD24P25063 80 aa14.2□□□□□ -0.14
PTPRU-202ENST00000373779 C5orf30Q96GV9 206 aa14.2□□□□□ -0.14
PTPRU-202ENST00000373779 LGALS3P17931 250 aaKnown RBP14.19□□□□□ -0.14
PTPRU-202ENST00000373779 SPTA1P02549 2419 aa14.19□□□□□ -0.14
PTPRU-202ENST00000373779 NEU4Q8WWR8 484 aaPredicted RBP14.19□□□□□ -0.14
PTPRU-202ENST00000373779 CLEC19AQ6UXS0 136 aa14.19□□□□□ -0.14
PTPRU-202ENST00000373779 Q6ZWC4 215 aa14.19□□□□□ -0.14
PTPRU-202ENST00000373779 KIR2DL4Q99706 377 aa14.19□□□□□ -0.14
PTPRU-202ENST00000373779 FGF23Q9GZV9 251 aaPredicted RBP14.19□□□□□ -0.14
PTPRU-202ENST00000373779 hDV102S1A0JD36 115 aa14.18□□□□□ -0.14
PTPRU-202ENST00000373779 H7C2G1 150 aa14.18□□□□□ -0.14
PTPRU-202ENST00000373779 ORAOV1Q8WV07 137 aa14.18□□□□□ -0.14
PTPRU-202ENST00000373779 FNDC4Q9H6D8 234 aaPredicted RBP14.18□□□□□ -0.14
PTPRU-202ENST00000373779 LTBP2Q14767 1821 aa14.18□□□□□ -0.14
PTPRU-202ENST00000373779 C19orf67A6NJJ6 358 aa14.18□□□□□ -0.14
PTPRU-202ENST00000373779 PRB4P10163 310 aaPredicted RBP14.18□□□□□ -0.14
PTPRU-202ENST00000373779 ASIPP42127 132 aa14.18□□□□□ -0.14
PTPRU-202ENST00000373779 NUP37Q8NFH4 326 aa14.18□□□□□ -0.14
PTPRU-202ENST00000373779 SCGB3A1Q96QR1 104 aa14.18□□□□□ -0.14
PTPRU-202ENST00000373779 ASCL2Q99929 193 aa14.18□□□□□ -0.14
PTPRU-202ENST00000373779 JKAMPQ9P055 326 aa14.18□□□□□ -0.14
PTPRU-202ENST00000373779 V9GYV3 84 aa14.18□□□□□ -0.14
PTPRU-202ENST00000373779 IGHV1-3A0A0C4DH29 117 aa14.18□□□□□ -0.14
PTPRU-202ENST00000373779 TRGV3P03979 118 aa14.18□□□□□ -0.14
PTPRU-202ENST00000373779 CENPVQ7Z7K6 275 aaPredicted RBP14.18□□□□□ -0.14
PTPRU-202ENST00000373779 C15orf65H3BRN8 121 aa14.17□□□□□ -0.14
PTPRU-202ENST00000373779 SYS1-DBNDD2H3BUS1 97 aa14.17□□□□□ -0.14
PTPRU-202ENST00000373779 TOMM40O96008 361 aa14.17□□□□□ -0.14
PTPRU-202ENST00000373779 PPBPP02775 128 aa14.17□□□□□ -0.14
PTPRU-202ENST00000373779 SEC11AP67812 179 aa14.17□□□□□ -0.14
PTPRU-202ENST00000373779 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.17□□□□□ -0.14
PTPRU-202ENST00000373779 A0A1B0GWJ7 208 aa14.17□□□□□ -0.14
PTPRU-202ENST00000373779 LY6EQ16553 131 aa14.17□□□□□ -0.14
PTPRU-202ENST00000373779 FAM106AQ4KMX7 169 aa14.17□□□□□ -0.14
PTPRU-202ENST00000373779 CLEC2AQ6UVW9 174 aa14.17□□□□□ -0.14
PTPRU-202ENST00000373779 LDLRAD2Q5SZI1 272 aa14.17□□□□□ -0.14
PTPRU-202ENST00000373779 IFI27L1Q96BM0 104 aa14.17□□□□□ -0.14
PTPRU-202ENST00000373779 SLC50A1Q9BRV3 221 aa14.17□□□□□ -0.14
PTPRU-202ENST00000373779 NXT2Q9NPJ8 142 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms