RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 ERHP84090 104 aaKnown RBP8.27□□□□□ -1.09
COL5A1-202ENST00000371820 LY6EQ16553 131 aa8.27□□□□□ -1.09
COL5A1-202ENST00000371820 FAM71F2Q6NXP2 309 aa8.27□□□□□ -1.09
COL5A1-202ENST00000371820 WDR73Q6P4I2 378 aa8.27□□□□□ -1.09
COL5A1-202ENST00000371820 TMEM144Q7Z5S9 345 aa8.27□□□□□ -1.09
COL5A1-202ENST00000371820 LINC01551Q86U37 167 aa8.27□□□□□ -1.09
COL5A1-202ENST00000371820 SLC24A4Q8NFF2 622 aa8.27□□□□□ -1.09
COL5A1-202ENST00000371820 OR5B3Q8NH48 314 aa8.27□□□□□ -1.09
COL5A1-202ENST00000371820 VSTM2AQ8TAG5 236 aa8.27□□□□□ -1.09
COL5A1-202ENST00000371820 OSR1Q8TAX0 266 aaPredicted RBP8.27□□□□□ -1.09
COL5A1-202ENST00000371820 DDB2Q92466 427 aa8.27□□□□□ -1.09
COL5A1-202ENST00000371820 C11orf52Q96A22 123 aa8.27□□□□□ -1.09
COL5A1-202ENST00000371820 SFRP2Q96HF1 295 aa8.27□□□□□ -1.09
COL5A1-202ENST00000371820 TMEM14BQ9NUH8 114 aa8.27□□□□□ -1.09
COL5A1-202ENST00000371820 TECRQ9NZ01 308 aaKnown RBP8.27□□□□□ -1.09
COL5A1-202ENST00000371820 LSM4Q9Y4Z0 139 aaKnown RBP8.27□□□□□ -1.09
COL5A1-202ENST00000371820 A0A1W2PN81 502 aa8.26□□□□□ -1.09
COL5A1-202ENST00000371820 A0A1W2PPQ1 181 aa8.26□□□□□ -1.09
COL5A1-202ENST00000371820 IFITM10A6NMD0 228 aa8.26□□□□□ -1.09
COL5A1-202ENST00000371820 NDUFB4O95168 129 aa8.26□□□□□ -1.09
COL5A1-202ENST00000371820 MT-ND6P03923 174 aa8.26□□□□□ -1.09
COL5A1-202ENST00000371820 CHRNA7P36544 502 aa8.26□□□□□ -1.09
COL5A1-202ENST00000371820 RANP62826 216 aaKnown RBP8.26□□□□□ -1.09
COL5A1-202ENST00000371820 C2orf83Q53S99 150 aa8.26□□□□□ -1.09
COL5A1-202ENST00000371820 FAM209BQ5JX69 171 aa8.26□□□□□ -1.09
COL5A1-202ENST00000371820 LHFPL4Q7Z7J7 247 aa8.26□□□□□ -1.09
COL5A1-202ENST00000371820 MRPL52Q86TS9 123 aaKnown RBP8.26□□□□□ -1.09
COL5A1-202ENST00000371820 ABHD12Q8N2K0 398 aa8.26□□□□□ -1.09
COL5A1-202ENST00000371820 C8orf31Q8N9H6 132 aa8.26□□□□□ -1.09
COL5A1-202ENST00000371820 OR1L8Q8NGR8 309 aa8.26□□□□□ -1.09
COL5A1-202ENST00000371820 UBALD1Q8TB05 177 aa8.26□□□□□ -1.09
COL5A1-202ENST00000371820 C5orf30Q96GV9 206 aa8.26□□□□□ -1.09
COL5A1-202ENST00000371820 AJUBAQ96IF1 538 aa8.26□□□□□ -1.09
COL5A1-202ENST00000371820 RHOVQ96L33 236 aa8.26□□□□□ -1.09
COL5A1-202ENST00000371820 GGTLC1Q9BX51 225 aa8.26□□□□□ -1.09
COL5A1-202ENST00000371820 MRPL32Q9BYC8 188 aaKnown RBP8.26□□□□□ -1.09
COL5A1-202ENST00000371820 PLEKHA3Q9HB20 300 aa8.26□□□□□ -1.09
COL5A1-202ENST00000371820 BET1LQ9NYM9 111 aa8.26□□□□□ -1.09
COL5A1-202ENST00000371820 IL36BQ9NZH7 164 aa8.26□□□□□ -1.09
COL5A1-202ENST00000371820 DPM3Q9P2X0 92 aa8.26□□□□□ -1.09
COL5A1-202ENST00000371820 IGHV3-43A0A0B4J1X8 118 aa8.25□□□□□ -1.09
COL5A1-202ENST00000371820 PRSS46E5RG02 174 aa8.25□□□□□ -1.09
COL5A1-202ENST00000371820 J3QR06 171 aa8.25□□□□□ -1.09
COL5A1-202ENST00000371820 UPK2O00526 184 aa8.25□□□□□ -1.09
COL5A1-202ENST00000371820 APOA2P02652 100 aa8.25□□□□□ -1.09
COL5A1-202ENST00000371820 IL6RP08887 468 aaPredicted RBP8.25□□□□□ -1.09
COL5A1-202ENST00000371820 OR10J4P0C629 311 aa8.25□□□□□ -1.09
COL5A1-202ENST00000371820 IGHV3-43DP0DP04 118 aa8.25□□□□□ -1.09
COL5A1-202ENST00000371820 GCHFRP30047 84 aa8.25□□□□□ -1.09
COL5A1-202ENST00000371820 BRS3P32247 399 aa8.25□□□□□ -1.09
COL5A1-202ENST00000371820 PRRX1P54821 245 aa8.25□□□□□ -1.09
COL5A1-202ENST00000371820 KRTAP10-3P60369 221 aa8.25□□□□□ -1.09
COL5A1-202ENST00000371820 GNB1P62873 340 aa8.25□□□□□ -1.09
COL5A1-202ENST00000371820 PRCDQ00LT1 54 aa8.25□□□□□ -1.09
COL5A1-202ENST00000371820 TMEM37Q8WXS4 190 aa8.25□□□□□ -1.09
COL5A1-202ENST00000371820 IFI27L2Q9H2X8 130 aa8.25□□□□□ -1.09
COL5A1-202ENST00000371820 AMMECR1Q9Y4X0 333 aaPredicted RBP8.25□□□□□ -1.09
COL5A1-202ENST00000371820 OR51B2Q9Y5P1 312 aa8.25□□□□□ -1.09
COL5A1-202ENST00000371820 DSCAML1Q8TD84 2053 aa8.25□□□□□ -1.09
COL5A1-202ENST00000371820 A0A087X0M5 115 aa8.24□□□□□ -1.09
COL5A1-202ENST00000371820 A0A1B0GX30 115 aa8.24□□□□□ -1.09
COL5A1-202ENST00000371820 A0A1W2PRE2 83 aa8.24□□□□□ -1.09
COL5A1-202ENST00000371820 HELTA6NFD8 242 aa8.24□□□□□ -1.09
COL5A1-202ENST00000371820 OOSP1A8MZH6 123 aa8.24□□□□□ -1.09
COL5A1-202ENST00000371820 DDTP30046 118 aa8.24□□□□□ -1.09
COL5A1-202ENST00000371820 OR10J1P30954 320 aa8.24□□□□□ -1.09
COL5A1-202ENST00000371820 TAS2R60P59551 318 aa8.24□□□□□ -1.09
COL5A1-202ENST00000371820 SELENOTP62341 195 aa8.24□□□□□ -1.09
COL5A1-202ENST00000371820 ARSJQ5FYB0 599 aaPredicted RBP8.24□□□□□ -1.09
COL5A1-202ENST00000371820 ETFRF1Q6IPR1 90 aa8.24□□□□□ -1.09
COL5A1-202ENST00000371820 CCDC144NLQ6NUI1 221 aa8.24□□□□□ -1.09
COL5A1-202ENST00000371820 STXBP6Q8NFX7 210 aa8.24□□□□□ -1.09
COL5A1-202ENST00000371820 OR4P4Q8NGL7 312 aa8.24□□□□□ -1.09
COL5A1-202ENST00000371820 OR1L4Q8NGR5 311 aa8.24□□□□□ -1.09
COL5A1-202ENST00000371820 GATAD1Q8WUU5 269 aa8.24□□□□□ -1.09
COL5A1-202ENST00000371820 MGST2Q99735 147 aa8.24□□□□□ -1.09
COL5A1-202ENST00000371820 PRSS22Q9GZN4 317 aa8.24□□□□□ -1.09
COL5A1-202ENST00000371820 OSTCQ9NRP0 149 aa8.24□□□□□ -1.09
COL5A1-202ENST00000371820 FUT9Q9Y231 359 aa8.24□□□□□ -1.09
COL5A1-202ENST00000371820 HILPDAQ9Y5L2 63 aa8.24□□□□□ -1.09
COL5A1-202ENST00000371820 A6NDX4 124 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 RRHO14718 337 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 PROP1O75360 226 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 AMBPP02760 352 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 ARL14EPLP0DKL9 152 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 MC5RP33032 325 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 TPPP2P59282 170 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 PRR20EP86478 221 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 PRR20CP86479 221 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 PRR20DP86480 221 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 PRR20BP86481 221 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 PRR20AP86496 221 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 ZNF90Q03938 601 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 C17orf58Q2M2W7 97 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 RPEL1Q2QD12 228 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 HLA-DRB5Q30154 266 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 TIGITQ495A1 244 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 CT45A1Q5HYN5 189 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 FAM162BQ5T6X4 162 aa8.23□□□□□ -1.09
COL5A1-202ENST00000371820 FAM78BQ5VT40 261 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms