RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 TRGV9Q99603 122 aa9.74□□□□□ -0.85
DEPDC1-201ENST00000370966 HIST1H2BLQ99880 126 aa9.74□□□□□ -0.85
DEPDC1-201ENST00000370966 NDUFAF3Q9BU61 184 aa9.74□□□□□ -0.85
DEPDC1-201ENST00000370966 IGHV3OR16-8A0A075B7F1 116 aa9.74□□□□□ -0.85
DEPDC1-201ENST00000370966 PPBPP02775 128 aa9.74□□□□□ -0.85
DEPDC1-201ENST00000370966 LGALS3P17931 250 aaKnown RBP9.74□□□□□ -0.85
DEPDC1-201ENST00000370966 OR10J3Q5JRS4 329 aa9.74□□□□□ -0.85
DEPDC1-201ENST00000370966 FAM71F2Q6NXP2 309 aa9.74□□□□□ -0.85
DEPDC1-201ENST00000370966 GAFA1Q96PS6 74 aa9.74□□□□□ -0.85
DEPDC1-201ENST00000370966 SEPSECSQ9HD40 501 aaKnown RBP9.74□□□□□ -0.85
DEPDC1-201ENST00000370966 TRAV3A0A0B4J244 114 aa9.73□□□□□ -0.85
DEPDC1-201ENST00000370966 PAX1P15863 534 aa9.73□□□□□ -0.85
DEPDC1-201ENST00000370966 H0YJW9 148 aa9.73□□□□□ -0.85
DEPDC1-201ENST00000370966 IGHV1-3A0A0C4DH29 117 aa9.73□□□□□ -0.85
DEPDC1-201ENST00000370966 LOC107984156A0A0G2JMH3 177 aa9.73□□□□□ -0.85
DEPDC1-201ENST00000370966 A0A0G2JNJ9 132 aa9.73□□□□□ -0.85
DEPDC1-201ENST00000370966 A0A1B0GWJ7 208 aa9.73□□□□□ -0.85
DEPDC1-201ENST00000370966 NTF4P34130 210 aa9.73□□□□□ -0.85
DEPDC1-201ENST00000370966 MINOS1Q5TGZ0 78 aa9.73□□□□□ -0.85
DEPDC1-201ENST00000370966 ARL17AQ8IVW1 177 aa9.73□□□□□ -0.85
DEPDC1-201ENST00000370966 HIST3H2BBQ8N257 126 aa9.73□□□□□ -0.85
DEPDC1-201ENST00000370966 C14orf144Q96I85 54 aa9.73□□□□□ -0.85
DEPDC1-201ENST00000370966 Q9UFV3 132 aa9.73□□□□□ -0.85
DEPDC1-201ENST00000370966 MINOS1-NBL1R4GNA1 71 aa9.73□□□□□ -0.85
DEPDC1-201ENST00000370966 PRSS2P07478 247 aa9.73□□□□□ -0.85
DEPDC1-201ENST00000370966 CD24P25063 80 aa9.73□□□□□ -0.85
DEPDC1-201ENST00000370966 RSPO1Q2MKA7 263 aaPredicted RBP9.73□□□□□ -0.85
DEPDC1-201ENST00000370966 HS3ST6Q96QI5 342 aa9.73□□□□□ -0.85
DEPDC1-201ENST00000370966 MYOD1P15172 320 aa9.72□□□□□ -0.85
DEPDC1-201ENST00000370966 NUTF2P61970 127 aaKnown RBP9.72□□□□□ -0.85
DEPDC1-201ENST00000370966 C18orf15Q96N68 181 aa9.72□□□□□ -0.85
DEPDC1-201ENST00000370966 NCOR1P1Q9H4R4 102 aa9.72□□□□□ -0.85
DEPDC1-201ENST00000370966 RFNGQ9Y644 331 aa9.72□□□□□ -0.85
DEPDC1-201ENST00000370966 IGHV3OR16-12A0A075B7B8 117 aa9.72□□□□□ -0.85
DEPDC1-201ENST00000370966 PRB3Q04118 309 aaPredicted RBP9.72□□□□□ -0.85
DEPDC1-201ENST00000370966 ADIPOQQ15848 244 aa9.72□□□□□ -0.85
DEPDC1-201ENST00000370966 NEUROG1Q92886 237 aa9.72□□□□□ -0.85
DEPDC1-201ENST00000370966 PEF1Q9UBV8 284 aaKnown RBP9.72□□□□□ -0.85
DEPDC1-201ENST00000370966 DOCK10Q96BY6 2186 aa9.72□□□□□ -0.85
DEPDC1-201ENST00000370966 H3BVH4 76 aa9.72□□□□□ -0.85
DEPDC1-201ENST00000370966 TGFAP01135 160 aa9.72□□□□□ -0.85
DEPDC1-201ENST00000370966 PSG1P11464 419 aa9.72□□□□□ -0.85
DEPDC1-201ENST00000370966 CIRBPQ14011 172 aaKnown RBP9.72□□□□□ -0.85
DEPDC1-201ENST00000370966 MAJINQ3KP22 176 aa9.72□□□□□ -0.85
DEPDC1-201ENST00000370966 Q5PR19 223 aa9.72□□□□□ -0.85
DEPDC1-201ENST00000370966 TMEM160Q9NX00 188 aa9.72□□□□□ -0.85
DEPDC1-201ENST00000370966 FRMPD3Q5JV73 1810 aa9.72□□□□□ -0.85
DEPDC1-201ENST00000370966 GTF3C1Q12789 2109 aa9.72□□□□□ -0.85
DEPDC1-201ENST00000370966 TRAV5A0A0B4J249 113 aa9.72□□□□□ -0.85
DEPDC1-201ENST00000370966 UBE2L6O14933 153 aa9.72□□□□□ -0.85
DEPDC1-201ENST00000370966 IGKV3-20P01619 116 aa9.72□□□□□ -0.85
DEPDC1-201ENST00000370966 PLP1P60201 277 aa9.72□□□□□ -0.85
DEPDC1-201ENST00000370966 MST1LQ2TV78 715 aa9.72□□□□□ -0.85
DEPDC1-201ENST00000370966 RASL11AQ6T310 242 aa9.72□□□□□ -0.85
DEPDC1-201ENST00000370966 IGLV3-1P01715 115 aa9.71□□□□□ -0.85
DEPDC1-201ENST00000370966 LINC00614P0C842 121 aa9.71□□□□□ -0.85
DEPDC1-201ENST00000370966 EFNA4P52798 201 aa9.71□□□□□ -0.85
DEPDC1-201ENST00000370966 TPTE2P1Q5T6R2 138 aa9.71□□□□□ -0.85
DEPDC1-201ENST00000370966 SPATA31B1PQ5VZV4 182 aa9.71□□□□□ -0.85
DEPDC1-201ENST00000370966 COPS9Q8WXC6 57 aa9.71□□□□□ -0.85
DEPDC1-201ENST00000370966 F11RQ9Y624 299 aaKnown RBP9.71□□□□□ -0.85
DEPDC1-201ENST00000370966 C3orf36Q3SXR2 165 aa9.71□□□□□ -0.86
DEPDC1-201ENST00000370966 SPSB3Q6PJ21 355 aa9.71□□□□□ -0.86
DEPDC1-201ENST00000370966 TTC9CQ8N5M4 171 aa9.71□□□□□ -0.86
DEPDC1-201ENST00000370966 SSBP4Q9BWG4 385 aaPredicted RBP9.71□□□□□ -0.86
DEPDC1-201ENST00000370966 MUC21A0A0G2JKD1 596 aa9.71□□□□□ -0.86
DEPDC1-201ENST00000370966 MUC21A0A140T8X8 626 aa9.71□□□□□ -0.86
DEPDC1-201ENST00000370966 MUC21Q5SSG8 566 aa9.71□□□□□ -0.86
DEPDC1-201ENST00000370966 NUDT10Q8NFP7 164 aa9.71□□□□□ -0.86
DEPDC1-201ENST00000370966 NUDT11Q96G61 164 aa9.71□□□□□ -0.86
DEPDC1-201ENST00000370966 GEMIN7Q9H840 131 aaKnown RBP9.71□□□□□ -0.86
DEPDC1-201ENST00000370966 ADCYAP1P18509 176 aa9.7□□□□□ -0.86
DEPDC1-201ENST00000370966 NPFFR1Q9GZQ6 430 aa9.7□□□□□ -0.86
DEPDC1-201ENST00000370966 NXT2Q9NPJ8 142 aaKnown RBP9.7□□□□□ -0.86
DEPDC1-201ENST00000370966 TRAV8-6A0A0B4J262 113 aa9.7□□□□□ -0.86
DEPDC1-201ENST00000370966 M0R1W7 72 aa9.7□□□□□ -0.86
DEPDC1-201ENST00000370966 IGHV3-11P01762 117 aa9.7□□□□□ -0.86
DEPDC1-201ENST00000370966 FAM90A2PQ658T7 463 aa9.7□□□□□ -0.86
DEPDC1-201ENST00000370966 SCGB3A1Q96QR1 104 aa9.7□□□□□ -0.86
DEPDC1-201ENST00000370966 AMBPP02760 352 aa9.7□□□□□ -0.86
DEPDC1-201ENST00000370966 SRSF6Q13247 344 aaKnown RBP9.7□□□□□ -0.86
DEPDC1-201ENST00000370966 F2Z2F3 143 aa9.7□□□□□ -0.86
DEPDC1-201ENST00000370966 GATA4P43694 442 aa9.7□□□□□ -0.86
DEPDC1-201ENST00000370966 ERVK11-1P61568 191 aa9.7□□□□□ -0.86
DEPDC1-201ENST00000370966 OR5AN1Q8NGI8 311 aa9.7□□□□□ -0.86
DEPDC1-201ENST00000370966 CHCHD1Q96BP2 118 aaKnown RBP9.7□□□□□ -0.86
DEPDC1-201ENST00000370966 SIGLEC9Q9Y336 463 aa9.7□□□□□ -0.86
DEPDC1-201ENST00000370966 BDP1A6H8Y1 2624 aa9.69□□□□□ -0.86
DEPDC1-201ENST00000370966 PLXND1Q9Y4D7 1925 aa9.69□□□□□ -0.86
DEPDC1-201ENST00000370966 TRAV21A0A0B4J279 112 aa9.69□□□□□ -0.86
DEPDC1-201ENST00000370966 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.69□□□□□ -0.86
DEPDC1-201ENST00000370966 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.69□□□□□ -0.86
DEPDC1-201ENST00000370966 WNT2P09544 360 aa9.69□□□□□ -0.86
DEPDC1-201ENST00000370966 RNASE2P10153 161 aaKnown RBP9.69□□□□□ -0.86
DEPDC1-201ENST00000370966 C5orf64Q2M2E5 130 aa9.69□□□□□ -0.86
DEPDC1-201ENST00000370966 DERL1Q9BUN8 251 aa9.69□□□□□ -0.86
DEPDC1-201ENST00000370966 SLC25A39Q9BZJ4 359 aaPredicted RBP9.69□□□□□ -0.86
DEPDC1-201ENST00000370966 TRAV9-2A0A087WT02 112 aa9.69□□□□□ -0.86
DEPDC1-201ENST00000370966 PMS2P5A8MQ11 134 aa9.69□□□□□ -0.86
DEPDC1-201ENST00000370966 TCRAP04437 139 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms