RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 OR10G4Q8NGN3 311 aa16.93■□□□□ 0.3
HOXA4-201ENST00000360046 OR10G9Q8NGN4 311 aa16.93■□□□□ 0.3
HOXA4-201ENST00000360046 OR10G7Q8NGN6 311 aa16.93■□□□□ 0.3
HOXA4-201ENST00000360046 RPRMQ9NS64 109 aa16.93■□□□□ 0.3
HOXA4-201ENST00000360046 RNF114Q9Y508 228 aa16.93■□□□□ 0.3
HOXA4-201ENST00000360046 CLPSL1A2RUU4 121 aa16.93■□□□□ 0.3
HOXA4-201ENST00000360046 M6PRP20645 277 aa16.93■□□□□ 0.3
HOXA4-201ENST00000360046 ADMP35318 185 aa16.93■□□□□ 0.3
HOXA4-201ENST00000360046 YPEL3P61236 119 aaPredicted RBP16.93■□□□□ 0.3
HOXA4-201ENST00000360046 KIAA0141Q14154 515 aaPredicted RBP16.93■□□□□ 0.3
HOXA4-201ENST00000360046 ZNF343Q6P1L6 599 aa16.93■□□□□ 0.3
HOXA4-201ENST00000360046 ATP6V0BQ99437 205 aa16.93■□□□□ 0.3
HOXA4-201ENST00000360046 DOK5Q9P104 306 aa16.93■□□□□ 0.3
HOXA4-201ENST00000360046 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.92■□□□□ 0.3
HOXA4-201ENST00000360046 TOMM40O96008 361 aa16.92■□□□□ 0.3
HOXA4-201ENST00000360046 ARL3P36405 182 aa16.92■□□□□ 0.3
HOXA4-201ENST00000360046 KHDC1LQ5JSQ8 128 aa16.92■□□□□ 0.3
HOXA4-201ENST00000360046 MYOZ3Q8TDC0 251 aa16.92■□□□□ 0.3
HOXA4-201ENST00000360046 IGHV3-35A0A0C4DH35 117 aa16.91■□□□□ 0.3
HOXA4-201ENST00000360046 TRBV12-3P01733 135 aa16.91■□□□□ 0.3
HOXA4-201ENST00000360046 FAM122CQ6P4D5 195 aa16.91■□□□□ 0.3
HOXA4-201ENST00000360046 SPSB3Q6PJ21 355 aa16.91■□□□□ 0.3
HOXA4-201ENST00000360046 LRRC20Q8TCA0 184 aa16.91■□□□□ 0.3
HOXA4-201ENST00000360046 LYZP61626 148 aa16.9■□□□□ 0.3
HOXA4-201ENST00000360046 DPPA3Q6W0C5 159 aa16.9■□□□□ 0.3
HOXA4-201ENST00000360046 OR51G1Q8NGK1 321 aa16.9■□□□□ 0.3
HOXA4-201ENST00000360046 WIPF2Q8TF74 440 aaPredicted RBP16.9■□□□□ 0.3
HOXA4-201ENST00000360046 Q8WTZ3 238 aa16.9■□□□□ 0.3
HOXA4-201ENST00000360046 UBE2E2Q96LR5 201 aa16.9■□□□□ 0.3
HOXA4-201ENST00000360046 PBDC1Q9BVG4 233 aa16.9■□□□□ 0.3
HOXA4-201ENST00000360046 MED9Q9NWA0 146 aa16.9■□□□□ 0.3
HOXA4-201ENST00000360046 COX7A2P2O60397 106 aa16.9■□□□□ 0.3
HOXA4-201ENST00000360046 NMBP08949 121 aa16.9■□□□□ 0.3
HOXA4-201ENST00000360046 ORM2P19652 201 aa16.9■□□□□ 0.3
HOXA4-201ENST00000360046 TCTEX1D4Q5JR98 221 aa16.9■□□□□ 0.3
HOXA4-201ENST00000360046 RPP25LQ8N5L8 163 aaKnown RBP16.9■□□□□ 0.3
HOXA4-201ENST00000360046 OR1B1Q8NGR6 318 aa16.9■□□□□ 0.3
HOXA4-201ENST00000360046 IL4P05112 153 aa16.89■□□□□ 0.29
HOXA4-201ENST00000360046 OR5G3P0C626 314 aa16.89■□□□□ 0.29
HOXA4-201ENST00000360046 ZNF600Q6ZNG1 722 aa16.89■□□□□ 0.29
HOXA4-201ENST00000360046 C11orf44Q8N8P7 122 aa16.89■□□□□ 0.29
HOXA4-201ENST00000360046 SAT2Q96F10 170 aaPredicted RBP16.89■□□□□ 0.29
HOXA4-201ENST00000360046 RCC1LQ96I51 464 aaKnown RBP16.89■□□□□ 0.29
HOXA4-201ENST00000360046 SLC25A22Q9H936 323 aa16.89■□□□□ 0.29
HOXA4-201ENST00000360046 PEF1Q9UBV8 284 aaKnown RBP16.89■□□□□ 0.29
HOXA4-201ENST00000360046 PUS1Q9Y606 427 aaKnown RBP eCLIP16.89■□□□□ 0.29
HOXA4-201ENST00000360046 LGALS1P09382 135 aaKnown RBP16.88■□□□□ 0.29
HOXA4-201ENST00000360046 BLOC1S1P78537 153 aa16.88■□□□□ 0.29
HOXA4-201ENST00000360046 RELQ04864 619 aaPredicted RBP16.88■□□□□ 0.29
HOXA4-201ENST00000360046 FAM209BQ5JX69 171 aa16.88■□□□□ 0.29
HOXA4-201ENST00000360046 PRIMA1Q86XR5 153 aa16.88■□□□□ 0.29
HOXA4-201ENST00000360046 OR1L4Q8NGR5 311 aa16.88■□□□□ 0.29
HOXA4-201ENST00000360046 PFDN5Q99471 154 aa16.88■□□□□ 0.29
HOXA4-201ENST00000360046 A0A1W2PPV4 95 aa16.87■□□□□ 0.29
HOXA4-201ENST00000360046 EIF3GO75821 320 aaKnown RBP eCLIP16.87■□□□□ 0.29
HOXA4-201ENST00000360046 CDC34P49427 236 aaPredicted RBP16.87■□□□□ 0.29
HOXA4-201ENST00000360046 PROK1P58294 105 aa16.87■□□□□ 0.29
HOXA4-201ENST00000360046 PXDC1Q5TGL8 231 aa16.87■□□□□ 0.29
HOXA4-201ENST00000360046 RNF125Q96EQ8 232 aa16.87■□□□□ 0.29
HOXA4-201ENST00000360046 ACTR3CQ9C0K3 210 aaPredicted RBP16.87■□□□□ 0.29
HOXA4-201ENST00000360046 HYPMO75409 117 aa16.87■□□□□ 0.29
HOXA4-201ENST00000360046 CD28P10747 220 aa16.87■□□□□ 0.29
HOXA4-201ENST00000360046 ZNF726P1Q15940 193 aa16.87■□□□□ 0.29
HOXA4-201ENST00000360046 C10orf113Q5VZT2 155 aa16.87■□□□□ 0.29
HOXA4-201ENST00000360046 HIST2H2BDQ6DRA6 164 aa16.87■□□□□ 0.29
HOXA4-201ENST00000360046 TMEM37Q8WXS4 190 aa16.87■□□□□ 0.29
HOXA4-201ENST00000360046 DNAJC4Q9NNZ3 241 aa16.87■□□□□ 0.29
HOXA4-201ENST00000360046 A0A1B0GV50 99 aa16.86■□□□□ 0.29
HOXA4-201ENST00000360046 BMPR1BO00238 502 aa16.86■□□□□ 0.29
HOXA4-201ENST00000360046 H2AFB1P0C5Y9 115 aa16.86■□□□□ 0.29
HOXA4-201ENST00000360046 RHOBP62745 196 aa16.86■□□□□ 0.29
HOXA4-201ENST00000360046 FAM78BQ5VT40 261 aa16.86■□□□□ 0.29
HOXA4-201ENST00000360046 SSX7Q7RTT5 188 aa16.86■□□□□ 0.29
HOXA4-201ENST00000360046 COMMD7Q86VX2 200 aa16.86■□□□□ 0.29
HOXA4-201ENST00000360046 GATAD1Q8WUU5 269 aa16.86■□□□□ 0.29
HOXA4-201ENST00000360046 UHRF2Q96PU4 802 aa16.86■□□□□ 0.29
HOXA4-201ENST00000360046 SEPSECSQ9HD40 501 aaKnown RBP16.86■□□□□ 0.29
HOXA4-201ENST00000360046 IGHV3OR16-8A0A075B7F1 116 aa16.85■□□□□ 0.29
HOXA4-201ENST00000360046 ELOA3CA0A087WX78 387 aaPredicted RBP16.85■□□□□ 0.29
HOXA4-201ENST00000360046 A0A1B0GUS0 222 aa16.85■□□□□ 0.29
HOXA4-201ENST00000360046 HMGB3O15347 200 aaKnown RBP16.85■□□□□ 0.29
HOXA4-201ENST00000360046 OR2C1O95371 312 aa16.85■□□□□ 0.29
HOXA4-201ENST00000360046 CDX1P47902 265 aaPredicted RBP16.85■□□□□ 0.29
HOXA4-201ENST00000360046 PLP1P60201 277 aa16.85■□□□□ 0.29
HOXA4-201ENST00000360046 FOXL1Q12952 345 aa16.85■□□□□ 0.29
HOXA4-201ENST00000360046 PATE2Q6UY27 113 aa16.85■□□□□ 0.29
HOXA4-201ENST00000360046 CCDC28AQ8IWP9 274 aa16.85■□□□□ 0.29
HOXA4-201ENST00000360046 SFT2D1Q8WV19 159 aa16.85■□□□□ 0.29
HOXA4-201ENST00000360046 C19orf24Q9BVV8 132 aa16.85■□□□□ 0.29
HOXA4-201ENST00000360046 CTXND1A0A1B0GTU2 59 aa16.84■□□□□ 0.29
HOXA4-201ENST00000360046 WI2-2373I1.2A0A1W2PRP0 233 aa16.84■□□□□ 0.29
HOXA4-201ENST00000360046 SEC14L6B5MCN3 397 aa16.84■□□□□ 0.29
HOXA4-201ENST00000360046 GGCTO75223 188 aaKnown RBP16.84■□□□□ 0.29
HOXA4-201ENST00000360046 SPATA31B1PQ5VZV4 182 aa16.84■□□□□ 0.29
HOXA4-201ENST00000360046 LCN15Q6UWW0 184 aa16.84■□□□□ 0.29
HOXA4-201ENST00000360046 TOMM20LQ6UXN7 152 aa16.84■□□□□ 0.29
HOXA4-201ENST00000360046 C18orf65Q6ZTR6 163 aa16.84■□□□□ 0.29
HOXA4-201ENST00000360046 RAB24Q969Q5 203 aa16.84■□□□□ 0.29
HOXA4-201ENST00000360046 HRH4Q9H3N8 390 aa16.84■□□□□ 0.29
HOXA4-201ENST00000360046 HIGD1AQ9Y241 93 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms