RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 SRSF1Q07955 248 aaKnown RBP eCLIP14.02□□□□□ -0.16
NPAS3-202ENST00000356141 ZNF114Q8NC26 417 aa14.02□□□□□ -0.16
NPAS3-202ENST00000356141 OR4X1Q8NH49 305 aa14.02□□□□□ -0.16
NPAS3-202ENST00000356141 WNT10AQ9GZT5 417 aa14.02□□□□□ -0.16
NPAS3-202ENST00000356141 APCP25054 2843 aa14.02□□□□□ -0.17
NPAS3-202ENST00000356141 ZNF705GA8MUZ8 300 aaPredicted RBP14.02□□□□□ -0.17
NPAS3-202ENST00000356141 SEC14L6B5MCN3 397 aa14.02□□□□□ -0.17
NPAS3-202ENST00000356141 MPDU1O75352 247 aa14.02□□□□□ -0.17
NPAS3-202ENST00000356141 PRR20EP86478 221 aa14.02□□□□□ -0.17
NPAS3-202ENST00000356141 PRR20CP86479 221 aa14.02□□□□□ -0.17
NPAS3-202ENST00000356141 PRR20DP86480 221 aa14.02□□□□□ -0.17
NPAS3-202ENST00000356141 PRR20BP86481 221 aa14.02□□□□□ -0.17
NPAS3-202ENST00000356141 PRR20AP86496 221 aa14.02□□□□□ -0.17
NPAS3-202ENST00000356141 FAM71F2Q6NXP2 309 aa14.02□□□□□ -0.17
NPAS3-202ENST00000356141 ZNF664Q8N3J9 261 aa14.02□□□□□ -0.17
NPAS3-202ENST00000356141 PIP4P2Q8N4L2 257 aa14.02□□□□□ -0.17
NPAS3-202ENST00000356141 MXRA5Q9NR99 2828 aa14.02□□□□□ -0.17
NPAS3-202ENST00000356141 NBR2O15453 112 aa14.01□□□□□ -0.17
NPAS3-202ENST00000356141 CXCL1P09341 107 aa14.01□□□□□ -0.17
NPAS3-202ENST00000356141 BSXQ3C1V8 233 aa14.01□□□□□ -0.17
NPAS3-202ENST00000356141 OR11H6Q8NGC7 330 aa14.01□□□□□ -0.17
NPAS3-202ENST00000356141 IGHV2-70DA0A0C4DH43 119 aa14.01□□□□□ -0.17
NPAS3-202ENST00000356141 GCHFRP30047 84 aa14.01□□□□□ -0.17
NPAS3-202ENST00000356141 TEX45Q8NA69 505 aa14.01□□□□□ -0.17
NPAS3-202ENST00000356141 BLNKQ8WV28 456 aa14.01□□□□□ -0.17
NPAS3-202ENST00000356141 TCF21O43680 179 aa14□□□□□ -0.17
NPAS3-202ENST00000356141 CRYGBP07316 175 aa14□□□□□ -0.17
NPAS3-202ENST00000356141 STAG3L2P0CL84 134 aa14□□□□□ -0.17
NPAS3-202ENST00000356141 RHOBP62745 196 aa14□□□□□ -0.17
NPAS3-202ENST00000356141 CYP2G1PQ6ZSU1 146 aa14□□□□□ -0.17
NPAS3-202ENST00000356141 ELOVL1Q9BW60 279 aa14□□□□□ -0.17
NPAS3-202ENST00000356141 IGKV1D-37A0A075B6S9 117 aa14□□□□□ -0.17
NPAS3-202ENST00000356141 TRAV40A0A0B4J280 105 aa14□□□□□ -0.17
NPAS3-202ENST00000356141 XKRY2A2RUG3 117 aa14□□□□□ -0.17
NPAS3-202ENST00000356141 RPL29P47914 159 aaKnown RBP14□□□□□ -0.17
NPAS3-202ENST00000356141 KRTAP10-9P60411 292 aa14□□□□□ -0.17
NPAS3-202ENST00000356141 SIRPDQ9H106 197 aa14□□□□□ -0.17
NPAS3-202ENST00000356141 TNFRSF19Q9NS68 423 aa14□□□□□ -0.17
NPAS3-202ENST00000356141 M0R1W7 72 aa14□□□□□ -0.17
NPAS3-202ENST00000356141 OVOL3O00110 214 aa14□□□□□ -0.17
NPAS3-202ENST00000356141 CEACAM3P40198 252 aa14□□□□□ -0.17
NPAS3-202ENST00000356141 SUB1P53999 127 aaKnown RBP eCLIP14□□□□□ -0.17
NPAS3-202ENST00000356141 NHLRC2Q8NBF2 726 aa14□□□□□ -0.17
NPAS3-202ENST00000356141 Q8WTZ3 238 aa14□□□□□ -0.17
NPAS3-202ENST00000356141 PACRGQ96M98 296 aaPredicted RBP14□□□□□ -0.17
NPAS3-202ENST00000356141 LINC01548A6NM66 108 aa13.99□□□□□ -0.17
NPAS3-202ENST00000356141 ODF3BA8MYP8 253 aa13.99□□□□□ -0.17
NPAS3-202ENST00000356141 COX7A2P2O60397 106 aa13.99□□□□□ -0.17
NPAS3-202ENST00000356141 ZNF503Q96F45 646 aa13.99□□□□□ -0.17
NPAS3-202ENST00000356141 SETXQ7Z333 2677 aaKnown RBP13.99□□□□□ -0.17
NPAS3-202ENST00000356141 CXorf1O96002 111 aa13.99□□□□□ -0.17
NPAS3-202ENST00000356141 PDLIM4P50479 330 aa13.99□□□□□ -0.17
NPAS3-202ENST00000356141 OR5AU1Q8NGC0 362 aa13.99□□□□□ -0.17
NPAS3-202ENST00000356141 OR4A5Q8NH83 315 aa13.99□□□□□ -0.17
NPAS3-202ENST00000356141 SDF2L1Q9HCN8 221 aa13.99□□□□□ -0.17
NPAS3-202ENST00000356141 CX3CL1P78423 397 aa13.98□□□□□ -0.17
NPAS3-202ENST00000356141 LY6EQ16553 131 aa13.98□□□□□ -0.17
NPAS3-202ENST00000356141 ECSCRQ19T08 205 aa13.98□□□□□ -0.17
NPAS3-202ENST00000356141 PATE2Q6UY27 113 aa13.98□□□□□ -0.17
NPAS3-202ENST00000356141 HIST3H2BBQ8N257 126 aa13.98□□□□□ -0.17
NPAS3-202ENST00000356141 LINC00479Q96M42 142 aa13.98□□□□□ -0.17
NPAS3-202ENST00000356141 ZNF355PQ9NSJ1 428 aa13.98□□□□□ -0.17
NPAS3-202ENST00000356141 M0R143 59 aa13.98□□□□□ -0.17
NPAS3-202ENST00000356141 LYZP61626 148 aa13.98□□□□□ -0.17
NPAS3-202ENST00000356141 PAX2Q02962 417 aa13.98□□□□□ -0.17
NPAS3-202ENST00000356141 RHEBQ15382 184 aa13.98□□□□□ -0.17
NPAS3-202ENST00000356141 NOL4LQ96MY1 436 aaPredicted RBP13.98□□□□□ -0.17
NPAS3-202ENST00000356141 RPL23P62829 140 aaKnown RBP13.97□□□□□ -0.17
NPAS3-202ENST00000356141 TMEM241Q24JQ0 296 aa13.97□□□□□ -0.17
NPAS3-202ENST00000356141 RNF151Q2KHN1 245 aa13.97□□□□□ -0.17
NPAS3-202ENST00000356141 BCL6BQ8N143 479 aaPredicted RBP13.97□□□□□ -0.17
NPAS3-202ENST00000356141 MALSU1Q96EH3 234 aa13.97□□□□□ -0.17
NPAS3-202ENST00000356141 MANBALQ9NQG1 85 aa13.97□□□□□ -0.17
NPAS3-202ENST00000356141 FUT9Q9Y231 359 aa13.97□□□□□ -0.17
NPAS3-202ENST00000356141 CREBBPQ92793 2442 aa13.97□□□□□ -0.17
NPAS3-202ENST00000356141 CRYBB3P26998 211 aa13.97□□□□□ -0.17
NPAS3-202ENST00000356141 SUMO1P63165 101 aaKnown RBP13.97□□□□□ -0.17
NPAS3-202ENST00000356141 TIGITQ495A1 244 aa13.97□□□□□ -0.17
NPAS3-202ENST00000356141 C16orf82Q7Z2V1 217 aa13.97□□□□□ -0.17
NPAS3-202ENST00000356141 HSPB9Q9BQS6 159 aa13.97□□□□□ -0.17
NPAS3-202ENST00000356141 TRBV20OR9-2A0A075B6H5 130 aa13.96□□□□□ -0.17
NPAS3-202ENST00000356141 IGHV4-38-2P0DP08 117 aa13.96□□□□□ -0.17
NPAS3-202ENST00000356141 PAX1P15863 534 aa13.96□□□□□ -0.17
NPAS3-202ENST00000356141 LINC00305Q7Z4B0 112 aa13.96□□□□□ -0.17
NPAS3-202ENST00000356141 ASCL2Q99929 193 aa13.96□□□□□ -0.17
NPAS3-202ENST00000356141 TUBA4BQ9H853 241 aa13.96□□□□□ -0.17
NPAS3-202ENST00000356141 ZNF320A2RRD8 509 aa13.96□□□□□ -0.17
NPAS3-202ENST00000356141 GAGE1Q13065 139 aa13.96□□□□□ -0.17
NPAS3-202ENST00000356141 C5orf64Q2M2E5 130 aa13.96□□□□□ -0.17
NPAS3-202ENST00000356141 CENPVL3A0A0U1RRI6 287 aa13.96□□□□□ -0.18
NPAS3-202ENST00000356141 HIST1H2BKO60814 126 aa13.96□□□□□ -0.18
NPAS3-202ENST00000356141 HIST1H2BJP06899 126 aa13.96□□□□□ -0.18
NPAS3-202ENST00000356141 HIST1H2BOP23527 126 aa13.96□□□□□ -0.18
NPAS3-202ENST00000356141 HIST1H2BBP33778 126 aa13.96□□□□□ -0.18
NPAS3-202ENST00000356141 HIST1H2BDP58876 126 aa13.96□□□□□ -0.18
NPAS3-202ENST00000356141 HIST1H2BCP62807 126 aa13.96□□□□□ -0.18
NPAS3-202ENST00000356141 UBE2L3P68036 154 aaKnown RBP13.96□□□□□ -0.18
NPAS3-202ENST00000356141 HIST2H2BEQ16778 126 aa13.96□□□□□ -0.18
NPAS3-202ENST00000356141 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.96□□□□□ -0.18
NPAS3-202ENST00000356141 HIST1H2BHQ93079 126 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms