RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 A0A0B4J2A0 478 aa11.51□□□□□ -0.57
PDGFA-201ENST00000354513 CLN5O75503 358 aa11.51□□□□□ -0.57
PDGFA-201ENST00000354513 IGKV1-17P01599 117 aa11.51□□□□□ -0.57
PDGFA-201ENST00000354513 CD5P06127 495 aa11.51□□□□□ -0.57
PDGFA-201ENST00000354513 CRYBB3P26998 211 aa11.51□□□□□ -0.57
PDGFA-201ENST00000354513 LYZL2Q7Z4W2 148 aa11.51□□□□□ -0.57
PDGFA-201ENST00000354513 C12orf45Q8N5I9 185 aaPredicted RBP11.51□□□□□ -0.57
PDGFA-201ENST00000354513 DCANP1Q8TF63 244 aa11.51□□□□□ -0.57
PDGFA-201ENST00000354513 MITD1Q8WV92 249 aa11.51□□□□□ -0.57
PDGFA-201ENST00000354513 SHPKQ9UHJ6 478 aa11.51□□□□□ -0.57
PDGFA-201ENST00000354513 PKD1P98161 4303 aa11.51□□□□□ -0.57
PDGFA-201ENST00000354513 DYNC1H1Q14204 4646 aaKnown RBP11.5□□□□□ -0.57
PDGFA-201ENST00000354513 IGHV4-28A0A0C4DH34 117 aa11.5□□□□□ -0.57
PDGFA-201ENST00000354513 DUXBA0A1W2PPF3 345 aa11.5□□□□□ -0.57
PDGFA-201ENST00000354513 KNCNA6PVL3 124 aa11.5□□□□□ -0.57
PDGFA-201ENST00000354513 DNASE2O00115 360 aaPredicted RBP11.5□□□□□ -0.57
PDGFA-201ENST00000354513 IFNA17P01571 189 aa11.5□□□□□ -0.57
PDGFA-201ENST00000354513 HOXB5P09067 269 aa11.5□□□□□ -0.57
PDGFA-201ENST00000354513 SNCAP37840 140 aa11.5□□□□□ -0.57
PDGFA-201ENST00000354513 P2RY1P47900 373 aa11.5□□□□□ -0.57
PDGFA-201ENST00000354513 TIGITQ495A1 244 aa11.5□□□□□ -0.57
PDGFA-201ENST00000354513 AARDQ4LEZ3 155 aa11.5□□□□□ -0.57
PDGFA-201ENST00000354513 FAM219AQ8IW50 185 aa11.5□□□□□ -0.57
PDGFA-201ENST00000354513 OR4X1Q8NH49 305 aa11.5□□□□□ -0.57
PDGFA-201ENST00000354513 C2CD4CQ8TF44 421 aa11.5□□□□□ -0.57
PDGFA-201ENST00000354513 GPR146Q96CH1 333 aa11.5□□□□□ -0.57
PDGFA-201ENST00000354513 RABAC1Q9UI14 185 aa11.5□□□□□ -0.57
PDGFA-201ENST00000354513 U3KQE9 123 aa11.5□□□□□ -0.57
PDGFA-201ENST00000354513 X6R8D5 127 aa11.5□□□□□ -0.57
PDGFA-201ENST00000354513 PKHD1P08F94 4074 aa11.5□□□□□ -0.57
PDGFA-201ENST00000354513 KIAA1109Q2LD37 5005 aa11.49□□□□□ -0.57
PDGFA-201ENST00000354513 ZNF705EA8MWA4 302 aaPredicted RBP11.49□□□□□ -0.57
PDGFA-201ENST00000354513 SNRPGP15A8MWD9 76 aa11.49□□□□□ -0.57
PDGFA-201ENST00000354513 CORTO00230 105 aa11.49□□□□□ -0.57
PDGFA-201ENST00000354513 ZNF688P0C7X2 276 aa11.49□□□□□ -0.57
PDGFA-201ENST00000354513 HOXA1P49639 335 aaPredicted RBP11.49□□□□□ -0.57
PDGFA-201ENST00000354513 CSNK1G2-AS1Q8NCQ2 148 aa11.49□□□□□ -0.57
PDGFA-201ENST00000354513 STXBP6Q8NFX7 210 aa11.49□□□□□ -0.57
PDGFA-201ENST00000354513 TMEM170AQ8WVE7 144 aa11.49□□□□□ -0.57
PDGFA-201ENST00000354513 GRAMD2BQ96HH9 432 aa11.49□□□□□ -0.57
PDGFA-201ENST00000354513 ELOA3CA0A087WX78 387 aaPredicted RBP11.48□□□□□ -0.57
PDGFA-201ENST00000354513 ADAP1O75689 374 aa11.48□□□□□ -0.57
PDGFA-201ENST00000354513 IFNA21P01568 189 aa11.48□□□□□ -0.57
PDGFA-201ENST00000354513 IFNA4P05014 189 aa11.48□□□□□ -0.57
PDGFA-201ENST00000354513 NPPCP23582 126 aa11.48□□□□□ -0.57
PDGFA-201ENST00000354513 OPRK1P41145 380 aa11.48□□□□□ -0.57
PDGFA-201ENST00000354513 RPL11P62913 178 aaKnown RBP11.48□□□□□ -0.57
PDGFA-201ENST00000354513 NMSQ5H8A3 153 aa11.48□□□□□ -0.57
PDGFA-201ENST00000354513 GGNBP1Q5YKI7 109 aa11.48□□□□□ -0.57
PDGFA-201ENST00000354513 STHQ8IWL8 128 aa11.48□□□□□ -0.57
PDGFA-201ENST00000354513 HRH4Q9H3N8 390 aa11.48□□□□□ -0.57
PDGFA-201ENST00000354513 TMEM231Q9H6L2 316 aa11.48□□□□□ -0.57
PDGFA-201ENST00000354513 CACNG5Q9UF02 275 aa11.48□□□□□ -0.57
PDGFA-201ENST00000354513 TMED3Q9Y3Q3 217 aa11.48□□□□□ -0.57
PDGFA-201ENST00000354513 ALG5Q9Y673 324 aa11.48□□□□□ -0.57
PDGFA-201ENST00000354513 GLMPQ8WWB7 406 aa11.47□□□□□ -0.57
PDGFA-201ENST00000354513 METTL26Q96S19 204 aa11.47□□□□□ -0.57
PDGFA-201ENST00000354513 CELA1Q9UNI1 258 aa11.47□□□□□ -0.57
PDGFA-201ENST00000354513 C7orf66A4D0T2 115 aa11.46□□□□□ -0.57
PDGFA-201ENST00000354513 IGLL5B9A064 214 aa11.46□□□□□ -0.57
PDGFA-201ENST00000354513 SSNA1O43805 119 aa11.46□□□□□ -0.57
PDGFA-201ENST00000354513 IGLC1P0CG04 106 aa11.46□□□□□ -0.57
PDGFA-201ENST00000354513 SULT1A3P0DMM9 295 aa11.46□□□□□ -0.57
PDGFA-201ENST00000354513 SULT1A4P0DMN0 295 aa11.46□□□□□ -0.57
PDGFA-201ENST00000354513 SPP1P10451 314 aa11.46□□□□□ -0.57
PDGFA-201ENST00000354513 TCTAP57738 103 aa11.46□□□□□ -0.57
PDGFA-201ENST00000354513 C16orf54Q6UWD8 224 aa11.46□□□□□ -0.57
PDGFA-201ENST00000354513 Q6ZTC4 211 aa11.46□□□□□ -0.57
PDGFA-201ENST00000354513 PDCD10Q9BUL8 212 aa11.46□□□□□ -0.57
PDGFA-201ENST00000354513 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.46□□□□□ -0.57
PDGFA-201ENST00000354513 CLEC5AQ9NY25 188 aa11.46□□□□□ -0.57
PDGFA-201ENST00000354513 A0A1W2PS18 150 aa11.45□□□□□ -0.58
PDGFA-201ENST00000354513 CCSO14618 274 aa11.45□□□□□ -0.58
PDGFA-201ENST00000354513 NXPH3O95157 252 aa11.45□□□□□ -0.58
PDGFA-201ENST00000354513 MIFP14174 115 aa11.45□□□□□ -0.58
PDGFA-201ENST00000354513 HLA-DMBP28068 263 aa11.45□□□□□ -0.58
PDGFA-201ENST00000354513 SUB1P53999 127 aaKnown RBP eCLIP11.45□□□□□ -0.58
PDGFA-201ENST00000354513 SPCS3P61009 180 aa11.45□□□□□ -0.58
PDGFA-201ENST00000354513 SMCO1Q147U7 214 aa11.45□□□□□ -0.58
PDGFA-201ENST00000354513 USF2Q15853 346 aaPredicted RBP11.45□□□□□ -0.58
PDGFA-201ENST00000354513 PRSS54Q6PEW0 395 aa11.45□□□□□ -0.58
PDGFA-201ENST00000354513 MORN3Q6PF18 240 aaPredicted RBP11.45□□□□□ -0.58
PDGFA-201ENST00000354513 OR1S1Q8NH92 325 aa11.45□□□□□ -0.58
PDGFA-201ENST00000354513 FAM25EA8MYX2 175 aa11.44□□□□□ -0.58
PDGFA-201ENST00000354513 C11orf94C9JXX5 98 aa11.44□□□□□ -0.58
PDGFA-201ENST00000354513 SLC25A6P12236 298 aa11.44□□□□□ -0.58
PDGFA-201ENST00000354513 C2orf83Q53S99 150 aa11.44□□□□□ -0.58
PDGFA-201ENST00000354513 ACTL10Q5JWF8 245 aa11.44□□□□□ -0.58
PDGFA-201ENST00000354513 OR52E5Q8NH55 327 aa11.44□□□□□ -0.58
PDGFA-201ENST00000354513 SCRT1Q9BWW7 348 aa11.44□□□□□ -0.58
PDGFA-201ENST00000354513 DNAH11Q96DT5 4516 aa11.43□□□□□ -0.58
PDGFA-201ENST00000354513 C5orf51A6NDU8 294 aa11.43□□□□□ -0.58
PDGFA-201ENST00000354513 GOSR2O14653 212 aa11.43□□□□□ -0.58
PDGFA-201ENST00000354513 RND2P52198 227 aa11.43□□□□□ -0.58
PDGFA-201ENST00000354513 IAH1Q2TAA2 248 aaPredicted RBP11.43□□□□□ -0.58
PDGFA-201ENST00000354513 TMEM41BQ5BJD5 291 aa11.43□□□□□ -0.58
PDGFA-201ENST00000354513 OR1S2Q8NGQ3 325 aa11.43□□□□□ -0.58
PDGFA-201ENST00000354513 RAB40CQ96S21 281 aa11.43□□□□□ -0.58
PDGFA-201ENST00000354513 ENY2Q9NPA8 101 aa11.43□□□□□ -0.58
PDGFA-201ENST00000354513 IGHV4-4A0A075B6R2 117 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms