RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 GTSF1Q8WW33 167 aa6.2□□□□□ -1.42
BRCA1-201ENST00000352993 CXXC4Q9H2H0 198 aa6.2□□□□□ -1.42
BRCA1-201ENST00000352993 PPIAL4EA0A075B759 164 aa6.2□□□□□ -1.42
BRCA1-201ENST00000352993 A0A1B0GXF2 115 aa6.2□□□□□ -1.42
BRCA1-201ENST00000352993 PPIAL4FP0DN26 164 aa6.2□□□□□ -1.42
BRCA1-201ENST00000352993 HOXC12P31275 282 aa6.2□□□□□ -1.42
BRCA1-201ENST00000352993 SSBP2P81877 361 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-201ENST00000352993 PSG3Q16557 428 aa6.2□□□□□ -1.42
BRCA1-201ENST00000352993 LINC01545Q5VT33 79 aa6.2□□□□□ -1.42
BRCA1-201ENST00000352993 WDR82Q6UXN9 313 aa6.2□□□□□ -1.42
BRCA1-201ENST00000352993 ADAMTSL5Q6ZMM2 481 aa6.2□□□□□ -1.42
BRCA1-201ENST00000352993 LINC00322Q6ZN03 302 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-201ENST00000352993 PRNTQ86SH4 94 aa6.2□□□□□ -1.42
BRCA1-201ENST00000352993 FAM173AQ9BQD7 235 aa6.2□□□□□ -1.42
BRCA1-201ENST00000352993 C1RLQ9NZP8 487 aa6.2□□□□□ -1.42
BRCA1-201ENST00000352993 JPT1Q9UK76 154 aa6.2□□□□□ -1.42
BRCA1-201ENST00000352993 CADP27708 2225 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 hADV38S2A0JD32 116 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 C15orf65H3BRN8 121 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 SAA2P0DJI9 122 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-201ENST00000352993 RAB9AP51151 201 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 CKS1BP61024 79 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 CACNA1EQ15878 2313 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 UTF1Q5T230 341 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 ABHD17BQ5VST6 288 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 NEGR1Q7Z3B1 354 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 ZADH2Q8N4Q0 377 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 CD177Q8N6Q3 437 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 DEFB108BQ8NET1 73 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 OR2Z1Q8NG97 314 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 SVIPQ8NHG7 77 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 SRSF12Q8WXF0 261 aaKnown RBP6.19□□□□□ -1.42
BRCA1-201ENST00000352993 FAM167A-AS1Q96KT0 104 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 ASCL2Q99929 193 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 DUSP23Q9BVJ7 150 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 DEFB127Q9H1M4 99 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 FOXA2Q9Y261 457 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-201ENST00000352993 TRAV8-1A0A0A6YYK1 113 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 IGHV3-21A0A0B4J1V1 117 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 NDUFS8O00217 210 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 F2RL2O00254 374 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 FAM87AP0C7U9 286 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 FCER1GP30273 86 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 CD69Q07108 199 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 ZNF766Q5HY98 468 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 RNFT1Q5M7Z0 435 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 CIARTQ8N365 385 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-201ENST00000352993 MTURNQ8N3F0 131 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 ATP6V0BQ99437 205 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 ZNF747Q9BV97 191 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 TMEM14BQ9NUH8 114 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 SSUH2Q9Y2M2 353 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 PLXNB1O43157 2135 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 SMAD7O15105 426 aaKnown RBP6.19□□□□□ -1.42
BRCA1-201ENST00000352993 Q0VFX4 171 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 IL11RAQ14626 422 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 TIMM23BQ5SRD1 257 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 PCP2Q8IVA1 136 aa6.19□□□□□ -1.42
BRCA1-201ENST00000352993 TMSB15BA0A087X1C1 80 aa6.18□□□□□ -1.42
BRCA1-201ENST00000352993 PSMB11A5LHX3 300 aa6.18□□□□□ -1.42
BRCA1-201ENST00000352993 GAGE12HA6NDE8 117 aa6.18□□□□□ -1.42
BRCA1-201ENST00000352993 CFIP05156 583 aa6.18□□□□□ -1.42
BRCA1-201ENST00000352993 PRCDQ00LT1 54 aa6.18□□□□□ -1.42
BRCA1-201ENST00000352993 C1orf229Q6ZS94 237 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-201ENST00000352993 CALYQ9NYX4 217 aa6.18□□□□□ -1.42
BRCA1-201ENST00000352993 FRYLO94915 3013 aa6.18□□□□□ -1.42
BRCA1-201ENST00000352993 NBEAQ8NFP9 2946 aa6.18□□□□□ -1.42
BRCA1-201ENST00000352993 K7EMI3 77 aa6.18□□□□□ -1.42
BRCA1-201ENST00000352993 K7ERJ3 54 aa6.18□□□□□ -1.42
BRCA1-201ENST00000352993 APELAP0DMC3 54 aa6.18□□□□□ -1.42
BRCA1-201ENST00000352993 FCGR2BP31994 310 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-201ENST00000352993 IFI27P40305 119 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-201ENST00000352993 NEU4Q8WWR8 484 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-201ENST00000352993 C18orf15Q96N68 181 aa6.18□□□□□ -1.42
BRCA1-201ENST00000352993 NDFIP1Q9BT67 221 aa6.18□□□□□ -1.42
BRCA1-201ENST00000352993 NHP2Q9NX24 153 aaKnown RBP6.18□□□□□ -1.42
BRCA1-201ENST00000352993 IQCF6A8MYZ5 107 aa6.18□□□□□ -1.42
BRCA1-201ENST00000352993 K7EQM0 130 aa6.18□□□□□ -1.42
BRCA1-201ENST00000352993 IGKV1-16P04430 117 aa6.18□□□□□ -1.42
BRCA1-201ENST00000352993 RIGQ13278 110 aa6.18□□□□□ -1.42
BRCA1-201ENST00000352993 CT45A1Q5HYN5 189 aa6.18□□□□□ -1.42
BRCA1-201ENST00000352993 C11orf53Q8IXP5 236 aa6.18□□□□□ -1.42
BRCA1-201ENST00000352993 BCL6BQ8N143 479 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-201ENST00000352993 CNEP1R1Q8N9A8 125 aa6.18□□□□□ -1.42
BRCA1-201ENST00000352993 CT45A3Q8NHU0 189 aa6.18□□□□□ -1.42
BRCA1-201ENST00000352993 ZNF414Q96IQ9 312 aa6.18□□□□□ -1.42
BRCA1-201ENST00000352993 SOX21Q9Y651 276 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-201ENST00000352993 NAV3Q8IVL0 2385 aa6.17□□□□□ -1.42
BRCA1-201ENST00000352993 A0A1B0GUT8 65 aa6.17□□□□□ -1.42
BRCA1-201ENST00000352993 UPK2O00526 184 aa6.17□□□□□ -1.42
BRCA1-201ENST00000352993 MGST3O14880 152 aa6.17□□□□□ -1.42
BRCA1-201ENST00000352993 FTH1P19P0C7X4 201 aa6.17□□□□□ -1.42
BRCA1-201ENST00000352993 FAM106CPP0CH98 169 aa6.17□□□□□ -1.42
BRCA1-201ENST00000352993 SMIM17P0DL12 118 aa6.17□□□□□ -1.42
BRCA1-201ENST00000352993 CEACAM3P40198 252 aa6.17□□□□□ -1.42
BRCA1-201ENST00000352993 FAM106AQ4KMX7 169 aa6.17□□□□□ -1.42
BRCA1-201ENST00000352993 FAM201AQ5SY85 155 aa6.17□□□□□ -1.42
BRCA1-201ENST00000352993 OR4X2Q8NGF9 303 aa6.17□□□□□ -1.42
BRCA1-201ENST00000352993 ZNRD1Q9P1U0 126 aa6.17□□□□□ -1.42
BRCA1-201ENST00000352993 C9orf172C9J069 976 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms