RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 PSG1P11464 419 aa14.36□□□□□ -0.11
SYNE4-202ENST00000340477 P2RY1P47900 373 aa14.36□□□□□ -0.11
SYNE4-202ENST00000340477 TFPI2P48307 235 aa14.36□□□□□ -0.11
SYNE4-202ENST00000340477 ACOT7LQ6ZUV0 252 aa14.36□□□□□ -0.11
SYNE4-202ENST00000340477 RNF125Q96EQ8 232 aa14.36□□□□□ -0.11
SYNE4-202ENST00000340477 PBDC1Q9BVG4 233 aa14.36□□□□□ -0.11
SYNE4-202ENST00000340477 WFDC10AQ9H1F0 79 aa14.36□□□□□ -0.11
SYNE4-202ENST00000340477 RCL1Q9Y2P8 373 aaKnown RBP14.36□□□□□ -0.11
SYNE4-202ENST00000340477 LSM5Q9Y4Y9 91 aaKnown RBP14.36□□□□□ -0.11
SYNE4-202ENST00000340477 HELTA6NFD8 242 aa14.35□□□□□ -0.11
SYNE4-202ENST00000340477 DFFBO76075 338 aa14.35□□□□□ -0.11
SYNE4-202ENST00000340477 APOHP02749 345 aaPredicted RBP14.35□□□□□ -0.11
SYNE4-202ENST00000340477 S100A10P60903 97 aa14.35□□□□□ -0.11
SYNE4-202ENST00000340477 TRGV9Q99603 122 aa14.35□□□□□ -0.11
SYNE4-202ENST00000340477 MGAT4CQ9UBM8 478 aa14.35□□□□□ -0.11
SYNE4-202ENST00000340477 COL7A1Q02388 2944 aa14.35□□□□□ -0.11
SYNE4-202ENST00000340477 CFDP00746 253 aaPredicted RBP14.34□□□□□ -0.11
SYNE4-202ENST00000340477 METTL15P1P0C7V9 234 aa14.34□□□□□ -0.11
SYNE4-202ENST00000340477 GBGT1Q8N5D6 347 aa14.34□□□□□ -0.11
SYNE4-202ENST00000340477 THAP8Q8NA92 274 aa14.34□□□□□ -0.11
SYNE4-202ENST00000340477 OR10P1Q8NGE3 313 aa14.34□□□□□ -0.11
SYNE4-202ENST00000340477 SPATA25Q9BR10 227 aa14.34□□□□□ -0.11
SYNE4-202ENST00000340477 UBQLN2Q9UHD9 624 aa14.34□□□□□ -0.11
SYNE4-202ENST00000340477 PRSS46E5RG02 174 aa14.33□□□□□ -0.12
SYNE4-202ENST00000340477 S100A7P31151 101 aa14.33□□□□□ -0.12
SYNE4-202ENST00000340477 BCAP31P51572 246 aa14.33□□□□□ -0.12
SYNE4-202ENST00000340477 AP2S1P53680 142 aaPredicted RBP14.33□□□□□ -0.12
SYNE4-202ENST00000340477 LYZP61626 148 aa14.33□□□□□ -0.12
SYNE4-202ENST00000340477 ZNF90Q03938 601 aa14.33□□□□□ -0.12
SYNE4-202ENST00000340477 USF2Q15853 346 aaPredicted RBP14.33□□□□□ -0.12
SYNE4-202ENST00000340477 HAGHQ16775 308 aa14.33□□□□□ -0.12
SYNE4-202ENST00000340477 FAM90A2PQ658T7 463 aa14.33□□□□□ -0.12
SYNE4-202ENST00000340477 TMEM14EPQ6UXP3 125 aa14.33□□□□□ -0.12
SYNE4-202ENST00000340477 STXBP6Q8NFX7 210 aa14.33□□□□□ -0.12
SYNE4-202ENST00000340477 PPP1R14BQ96C90 147 aa14.33□□□□□ -0.12
SYNE4-202ENST00000340477 FAM110AQ9BQ89 295 aa14.33□□□□□ -0.12
SYNE4-202ENST00000340477 MARVELD1Q9BSK0 173 aa14.33□□□□□ -0.12
SYNE4-202ENST00000340477 DNAH9Q9NYC9 4486 aa14.33□□□□□ -0.12
SYNE4-202ENST00000340477 IGKV1D-37A0A075B6S9 117 aa14.32□□□□□ -0.12
SYNE4-202ENST00000340477 TRAV2A0A0B4J234 112 aa14.32□□□□□ -0.12
SYNE4-202ENST00000340477 K7EPK0 472 aa14.32□□□□□ -0.12
SYNE4-202ENST00000340477 GOSR2O14653 212 aa14.32□□□□□ -0.12
SYNE4-202ENST00000340477 DLK1P80370 383 aa14.32□□□□□ -0.12
SYNE4-202ENST00000340477 OR2F1Q13607 317 aa14.32□□□□□ -0.12
SYNE4-202ENST00000340477 WFDC3Q8IUB2 231 aa14.32□□□□□ -0.12
SYNE4-202ENST00000340477 BPIFCQ8NFQ6 507 aa14.32□□□□□ -0.12
SYNE4-202ENST00000340477 RCHY1Q96PM5 261 aa14.32□□□□□ -0.12
SYNE4-202ENST00000340477 TM2D3Q9BRN9 247 aa14.32□□□□□ -0.12
SYNE4-202ENST00000340477 GGTLC1Q9BX51 225 aa14.32□□□□□ -0.12
SYNE4-202ENST00000340477 MS4A6AQ9H2W1 248 aa14.32□□□□□ -0.12
SYNE4-202ENST00000340477 LOC102724200A0A096LPH7 203 aaPredicted RBP14.31□□□□□ -0.12
SYNE4-202ENST00000340477 C7orf66A4D0T2 115 aa14.31□□□□□ -0.12
SYNE4-202ENST00000340477 SSNA1O43805 119 aa14.31□□□□□ -0.12
SYNE4-202ENST00000340477 CAV2P51636 162 aa14.31□□□□□ -0.12
SYNE4-202ENST00000340477 PAX9P55771 341 aa14.31□□□□□ -0.12
SYNE4-202ENST00000340477 RRAS2P62070 204 aaPredicted RBP14.31□□□□□ -0.12
SYNE4-202ENST00000340477 ODF3L2Q3SX64 289 aa14.31□□□□□ -0.12
SYNE4-202ENST00000340477 TMEM144Q7Z5S9 345 aa14.31□□□□□ -0.12
SYNE4-202ENST00000340477 FNDC10F2Z333 226 aa14.3□□□□□ -0.12
SYNE4-202ENST00000340477 C16orf54Q6UWD8 224 aa14.3□□□□□ -0.12
SYNE4-202ENST00000340477 LILRB2Q8N423 598 aa14.3□□□□□ -0.12
SYNE4-202ENST00000340477 WWC2-AS2Q96NR7 200 aa14.3□□□□□ -0.12
SYNE4-202ENST00000340477 U3KQE9 123 aa14.3□□□□□ -0.12
SYNE4-202ENST00000340477 RBMY1BA6NDE4 496 aaKnown RBP14.29□□□□□ -0.12
SYNE4-202ENST00000340477 RBMY1EA6NEQ0 496 aaKnown RBP14.29□□□□□ -0.12
SYNE4-202ENST00000340477 PTTG1O95997 202 aa14.29□□□□□ -0.12
SYNE4-202ENST00000340477 RBMY1DP0C7P1 496 aaKnown RBP14.29□□□□□ -0.12
SYNE4-202ENST00000340477 APOC4P55056 127 aa14.29□□□□□ -0.12
SYNE4-202ENST00000340477 CYCSP99999 105 aaKnown RBP14.29□□□□□ -0.12
SYNE4-202ENST00000340477 SIGLEC15Q6ZMC9 328 aa14.29□□□□□ -0.12
SYNE4-202ENST00000340477 STX12Q86Y82 276 aa14.29□□□□□ -0.12
SYNE4-202ENST00000340477 GGACTQ9BVM4 153 aa14.29□□□□□ -0.12
SYNE4-202ENST00000340477 NPVFQ9HCQ7 196 aa14.29□□□□□ -0.12
SYNE4-202ENST00000340477 FBXL17Q9UF56 701 aa14.29□□□□□ -0.12
SYNE4-202ENST00000340477 IGKV1OR2-108A0A075B7D4 117 aa14.28□□□□□ -0.12
SYNE4-202ENST00000340477 PMS2P5A8MQ11 134 aa14.28□□□□□ -0.12
SYNE4-202ENST00000340477 RLN2P04090 185 aa14.28□□□□□ -0.12
SYNE4-202ENST00000340477 RAB32Q13637 225 aa14.28□□□□□ -0.12
SYNE4-202ENST00000340477 LINC00322Q6ZN03 302 aaPredicted RBP14.28□□□□□ -0.12
SYNE4-202ENST00000340477 GLMPQ8WWB7 406 aa14.28□□□□□ -0.12
SYNE4-202ENST00000340477 MAP6D1Q9H9H5 199 aa14.28□□□□□ -0.12
SYNE4-202ENST00000340477 BUB3O43684 328 aa14.27□□□□□ -0.13
SYNE4-202ENST00000340477 CCNKO75909 580 aa14.27□□□□□ -0.13
SYNE4-202ENST00000340477 SELENOTP62341 195 aa14.27□□□□□ -0.13
SYNE4-202ENST00000340477 TEPPQ6URK8 271 aa14.27□□□□□ -0.13
SYNE4-202ENST00000340477 CYP2G1PQ6ZSU1 146 aa14.27□□□□□ -0.13
SYNE4-202ENST00000340477 S100A7AQ86SG5 101 aa14.27□□□□□ -0.13
SYNE4-202ENST00000340477 TMEM147Q9BVK8 224 aa14.27□□□□□ -0.13
SYNE4-202ENST00000340477 NMES1Q9C002 83 aa14.27□□□□□ -0.13
SYNE4-202ENST00000340477 SLC45A2Q9UMX9 530 aa14.27□□□□□ -0.13
SYNE4-202ENST00000340477 DEDDO75618 318 aa14.26□□□□□ -0.13
SYNE4-202ENST00000340477 HBG1P69891 147 aa14.26□□□□□ -0.13
SYNE4-202ENST00000340477 HBG2P69892 147 aa14.26□□□□□ -0.13
SYNE4-202ENST00000340477 SLC38A11Q08AI6 406 aa14.26□□□□□ -0.13
SYNE4-202ENST00000340477 C1orf194Q5T5A4 169 aa14.26□□□□□ -0.13
SYNE4-202ENST00000340477 APRG1Q8IVJ8 170 aa14.26□□□□□ -0.13
SYNE4-202ENST00000340477 LYRM2Q9NU23 88 aaPredicted RBP14.26□□□□□ -0.13
SYNE4-202ENST00000340477 K7EQG2 157 aa14.25□□□□□ -0.13
SYNE4-202ENST00000340477 SIX6O95475 246 aa14.25□□□□□ -0.13
SYNE4-202ENST00000340477 ORM2P19652 201 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms