RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 CT45A5P0DMU8 189 aa16.43■□□□□ 0.22
RUNX3-202ENST00000338888 CT45A7P0DMV0 189 aa16.43■□□□□ 0.22
RUNX3-202ENST00000338888 LINC01545Q5VT33 79 aa16.43■□□□□ 0.22
RUNX3-202ENST00000338888 COL27A1Q8IZC6 1860 aaPredicted RBP16.43■□□□□ 0.22
RUNX3-202ENST00000338888 CACNG8Q8WXS5 425 aa16.43■□□□□ 0.22
RUNX3-202ENST00000338888 TRGV5A0A0B4J1U4 118 aa16.43■□□□□ 0.22
RUNX3-202ENST00000338888 E7EUB6 86 aa16.43■□□□□ 0.22
RUNX3-202ENST00000338888 IGKV3-15P01624 115 aa16.43■□□□□ 0.22
RUNX3-202ENST00000338888 RNFT1Q5M7Z0 435 aa16.43■□□□□ 0.22
RUNX3-202ENST00000338888 UFSP1Q6NVU6 142 aa16.43■□□□□ 0.22
RUNX3-202ENST00000338888 DUX4L9Q6RFH8 374 aaPredicted RBP16.43■□□□□ 0.22
RUNX3-202ENST00000338888 RBPMS2Q6ZRY4 209 aaKnown RBP16.43■□□□□ 0.22
RUNX3-202ENST00000338888 AP1S3Q96PC3 154 aa16.43■□□□□ 0.22
RUNX3-202ENST00000338888 ARFGEF3Q5TH69 2177 aa16.42■□□□□ 0.22
RUNX3-202ENST00000338888 KBTBD11-OT1A0A1B0GTJ5 212 aa16.42■□□□□ 0.22
RUNX3-202ENST00000338888 FSTL3O95633 263 aa16.42■□□□□ 0.22
RUNX3-202ENST00000338888 HOXC12P31275 282 aa16.42■□□□□ 0.22
RUNX3-202ENST00000338888 DAZAP1Q96EP5 407 aaKnown RBP16.42■□□□□ 0.22
RUNX3-202ENST00000338888 NCOR1P1Q9H4R4 102 aa16.42■□□□□ 0.22
RUNX3-202ENST00000338888 KLRC4-KLRK1H3BQV0 150 aa16.42■□□□□ 0.22
RUNX3-202ENST00000338888 H3BTX0 84 aa16.42■□□□□ 0.22
RUNX3-202ENST00000338888 NCR2O95944 276 aa16.42■□□□□ 0.22
RUNX3-202ENST00000338888 ATP5IP56385 69 aaPredicted RBP16.42■□□□□ 0.22
RUNX3-202ENST00000338888 RBMXL3Q8N7X1 1067 aaKnown RBP16.42■□□□□ 0.22
RUNX3-202ENST00000338888 CNEP1R1Q8N9A8 125 aa16.42■□□□□ 0.22
RUNX3-202ENST00000338888 JMJD8Q96S16 334 aa16.42■□□□□ 0.22
RUNX3-202ENST00000338888 SOX21Q9Y651 276 aaPredicted RBP16.42■□□□□ 0.22
RUNX3-202ENST00000338888 SEC11AP67812 179 aa16.41■□□□□ 0.22
RUNX3-202ENST00000338888 ERHP84090 104 aaKnown RBP16.41■□□□□ 0.22
RUNX3-202ENST00000338888 GTF2H5Q6ZYL4 71 aa16.41■□□□□ 0.22
RUNX3-202ENST00000338888 ITLN1Q8WWA0 313 aa16.41■□□□□ 0.22
RUNX3-202ENST00000338888 NEU4Q8WWR8 484 aaPredicted RBP16.41■□□□□ 0.22
RUNX3-202ENST00000338888 ZNF430Q9H8G1 570 aaPredicted RBP16.41■□□□□ 0.22
RUNX3-202ENST00000338888 KLF12Q9Y4X4 402 aa16.41■□□□□ 0.22
RUNX3-202ENST00000338888 C19orf71A6NCJ1 209 aa16.41■□□□□ 0.22
RUNX3-202ENST00000338888 TMEM11P17152 192 aa16.41■□□□□ 0.22
RUNX3-202ENST00000338888 ORM2P19652 201 aa16.41■□□□□ 0.22
RUNX3-202ENST00000338888 PAX2Q02962 417 aa16.41■□□□□ 0.22
RUNX3-202ENST00000338888 MOGAT3Q86VF5 341 aa16.41■□□□□ 0.22
RUNX3-202ENST00000338888 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.4■□□□□ 0.22
RUNX3-202ENST00000338888 G3V4G9 280 aa16.4■□□□□ 0.22
RUNX3-202ENST00000338888 H3BUT2 72 aa16.4■□□□□ 0.22
RUNX3-202ENST00000338888 KLK10O43240 276 aa16.4■□□□□ 0.22
RUNX3-202ENST00000338888 MRPL36Q9P0J6 103 aaKnown RBP16.4■□□□□ 0.22
RUNX3-202ENST00000338888 HEATR1Q9H583 2144 aaKnown RBP16.4■□□□□ 0.22
RUNX3-202ENST00000338888 IGKV1D-37A0A075B6S9 117 aa16.4■□□□□ 0.22
RUNX3-202ENST00000338888 TCRBV4S1A1TA0A5B7 111 aa16.4■□□□□ 0.22
RUNX3-202ENST00000338888 TCTAP57738 103 aa16.4■□□□□ 0.22
RUNX3-202ENST00000338888 ASPMQ8IZT6 3477 aa16.4■□□□□ 0.22
RUNX3-202ENST00000338888 DYSFO75923 2080 aa16.39■□□□□ 0.21
RUNX3-202ENST00000338888 NBEAP1P0C6P0 100 aa16.39■□□□□ 0.21
RUNX3-202ENST00000338888 TMEM164Q5U3C3 297 aa16.39■□□□□ 0.21
RUNX3-202ENST00000338888 Q6ZT83 130 aa16.39■□□□□ 0.21
RUNX3-202ENST00000338888 NDUFA4L2Q9NRX3 87 aa16.39■□□□□ 0.21
RUNX3-202ENST00000338888 C9orf118A6NHY6 69 aa16.39■□□□□ 0.21
RUNX3-202ENST00000338888 APOHP02749 345 aaPredicted RBP16.39■□□□□ 0.21
RUNX3-202ENST00000338888 CT83Q5H943 113 aa16.39■□□□□ 0.21
RUNX3-202ENST00000338888 HILPDAQ9Y5L2 63 aa16.39■□□□□ 0.21
RUNX3-202ENST00000338888 CLEC2AQ6UVW9 174 aa16.38■□□□□ 0.21
RUNX3-202ENST00000338888 ZNF747Q9BV97 191 aa16.38■□□□□ 0.21
RUNX3-202ENST00000338888 RABAC1Q9UI14 185 aa16.38■□□□□ 0.21
RUNX3-202ENST00000338888 DSPP15924 2871 aaKnown RBP16.38■□□□□ 0.21
RUNX3-202ENST00000338888 GUSBP1Q15486 140 aa16.37■□□□□ 0.21
RUNX3-202ENST00000338888 MSMPQ1L6U9 139 aa16.37■□□□□ 0.21
RUNX3-202ENST00000338888 C10orf55Q5SWW7 151 aa16.37■□□□□ 0.21
RUNX3-202ENST00000338888 BHLHA15Q7RTS1 189 aaPredicted RBP16.37■□□□□ 0.21
RUNX3-202ENST00000338888 C5orf17Q8NAS9 161 aa16.37■□□□□ 0.21
RUNX3-202ENST00000338888 SPRY4Q9C004 299 aa16.37■□□□□ 0.21
RUNX3-202ENST00000338888 AP5S1Q9NUS5 200 aa16.37■□□□□ 0.21
RUNX3-202ENST00000338888 LTAP01374 205 aa16.37■□□□□ 0.21
RUNX3-202ENST00000338888 MZT1Q08AG7 82 aa16.37■□□□□ 0.21
RUNX3-202ENST00000338888 TMEM116Q8NCL8 245 aa16.37■□□□□ 0.21
RUNX3-202ENST00000338888 H3BRM9 83 aa16.36■□□□□ 0.21
RUNX3-202ENST00000338888 COL8A1P27658 744 aa16.36■□□□□ 0.21
RUNX3-202ENST00000338888 WT1-ASQ06250 92 aa16.36■□□□□ 0.21
RUNX3-202ENST00000338888 MBNL2Q5VZF2 373 aaKnown RBP16.36■□□□□ 0.21
RUNX3-202ENST00000338888 MDS2Q8NDY4 140 aa16.36■□□□□ 0.21
RUNX3-202ENST00000338888 RAB37Q96AX2 223 aa16.36■□□□□ 0.21
RUNX3-202ENST00000338888 HARBI1Q96MB7 349 aa16.36■□□□□ 0.21
RUNX3-202ENST00000338888 GFRA4Q9GZZ7 299 aa16.36■□□□□ 0.21
RUNX3-202ENST00000338888 ZNF492Q9P255 531 aa16.36■□□□□ 0.21
RUNX3-202ENST00000338888 CHTOPQ9Y3Y2 248 aaKnown RBP16.36■□□□□ 0.21
RUNX3-202ENST00000338888 DSCAMO60469 2012 aa16.36■□□□□ 0.21
RUNX3-202ENST00000338888 TRAV8-1A0A0A6YYK1 113 aa16.36■□□□□ 0.21
RUNX3-202ENST00000338888 FGF6P10767 208 aa16.36■□□□□ 0.21
RUNX3-202ENST00000338888 Q71RC1 249 aaPredicted RBP16.36■□□□□ 0.21
RUNX3-202ENST00000338888 CIARTQ8N365 385 aaPredicted RBP16.36■□□□□ 0.21
RUNX3-202ENST00000338888 DEFB108BQ8NET1 73 aa16.36■□□□□ 0.21
RUNX3-202ENST00000338888 NAV3Q8IVL0 2385 aa16.35■□□□□ 0.21
RUNX3-202ENST00000338888 K7EP34 96 aa16.35■□□□□ 0.21
RUNX3-202ENST00000338888 FAM87AP0C7U9 286 aa16.35■□□□□ 0.21
RUNX3-202ENST00000338888 FMC1Q96HJ9 113 aa16.35■□□□□ 0.21
RUNX3-202ENST00000338888 SPOCK3Q9BQ16 436 aa16.35■□□□□ 0.21
RUNX3-202ENST00000338888 OTOGLQ3ZCN5 2332 aa16.35■□□□□ 0.21
RUNX3-202ENST00000338888 A6NDN8 102 aa16.35■□□□□ 0.21
RUNX3-202ENST00000338888 CIDEAO60543 219 aa16.35■□□□□ 0.21
RUNX3-202ENST00000338888 TCRAP04437 139 aa16.35■□□□□ 0.21
RUNX3-202ENST00000338888 OR10AG1Q8NH19 301 aa16.35■□□□□ 0.21
RUNX3-202ENST00000338888 RAB9BQ9NP90 201 aa16.35■□□□□ 0.21
RUNX3-202ENST00000338888 HAX1O00165 279 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms