RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 SMIM13P0DJ93 91 aa14.05□□□□□ -0.16
TRAPPC11-201ENST00000334690 ADCYAP1P18509 176 aa14.05□□□□□ -0.16
TRAPPC11-201ENST00000334690 ZNF672Q499Z4 452 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC11-201ENST00000334690 GEMIN7Q9H840 131 aaKnown RBP14.05□□□□□ -0.16
TRAPPC11-201ENST00000334690 IGKV1D-17A0A075B6S4 117 aa14.05□□□□□ -0.16
TRAPPC11-201ENST00000334690 RHOGP84095 191 aa14.05□□□□□ -0.16
TRAPPC11-201ENST00000334690 ZNF585BQ52M93 769 aa14.05□□□□□ -0.16
TRAPPC11-201ENST00000334690 ZNF524Q96C55 264 aa14.05□□□□□ -0.16
TRAPPC11-201ENST00000334690 ZNF256Q9Y2P7 627 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC11-201ENST00000334690 TRAV3A0A0B4J244 114 aa14.05□□□□□ -0.16
TRAPPC11-201ENST00000334690 IGKV1-6A0A0C4DH72 117 aa14.05□□□□□ -0.16
TRAPPC11-201ENST00000334690 H7C2G1 150 aa14.05□□□□□ -0.16
TRAPPC11-201ENST00000334690 ITGB1BP1O14713 200 aa14.05□□□□□ -0.16
TRAPPC11-201ENST00000334690 UBE2L6O14933 153 aa14.05□□□□□ -0.16
TRAPPC11-201ENST00000334690 CD24P25063 80 aa14.05□□□□□ -0.16
TRAPPC11-201ENST00000334690 PRB3Q04118 309 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC11-201ENST00000334690 Q6ZS92 163 aa14.05□□□□□ -0.16
TRAPPC11-201ENST00000334690 COPS9Q8WXC6 57 aa14.05□□□□□ -0.16
TRAPPC11-201ENST00000334690 SCGB3A1Q96QR1 104 aa14.05□□□□□ -0.16
TRAPPC11-201ENST00000334690 TRAV9-2A0A087WT02 112 aa14.04□□□□□ -0.16
TRAPPC11-201ENST00000334690 TRAV5A0A0B4J249 113 aa14.04□□□□□ -0.16
TRAPPC11-201ENST00000334690 NTF4P34130 210 aa14.04□□□□□ -0.16
TRAPPC11-201ENST00000334690 MST1LQ2TV78 715 aa14.04□□□□□ -0.16
TRAPPC11-201ENST00000334690 FNDC10F2Z333 226 aa14.04□□□□□ -0.16
TRAPPC11-201ENST00000334690 PAX1P15863 534 aa14.04□□□□□ -0.16
TRAPPC11-201ENST00000334690 SPATA31B1PQ5VZV4 182 aa14.04□□□□□ -0.16
TRAPPC11-201ENST00000334690 NUP37Q8NFH4 326 aa14.04□□□□□ -0.16
TRAPPC11-201ENST00000334690 SMIM12Q96EX1 92 aa14.04□□□□□ -0.16
TRAPPC11-201ENST00000334690 WISP1O95388 367 aa14.04□□□□□ -0.16
TRAPPC11-201ENST00000334690 TRGV9Q99603 122 aa14.04□□□□□ -0.16
TRAPPC11-201ENST00000334690 PLXNA2O75051 1894 aa14.04□□□□□ -0.16
TRAPPC11-201ENST00000334690 OOSP1A8MZH6 123 aa14.03□□□□□ -0.16
TRAPPC11-201ENST00000334690 GFI1BQ5VTD9 330 aa14.03□□□□□ -0.16
TRAPPC11-201ENST00000334690 FOXC2Q99958 501 aa14.03□□□□□ -0.16
TRAPPC11-201ENST00000334690 TMEM170BQ5T4T1 132 aa14.03□□□□□ -0.16
TRAPPC11-201ENST00000334690 SPSB3Q6PJ21 355 aa14.03□□□□□ -0.16
TRAPPC11-201ENST00000334690 NUDT10Q8NFP7 164 aa14.03□□□□□ -0.16
TRAPPC11-201ENST00000334690 NUDT11Q96G61 164 aa14.03□□□□□ -0.16
TRAPPC11-201ENST00000334690 DERL1Q9BUN8 251 aa14.03□□□□□ -0.16
TRAPPC11-201ENST00000334690 HELZP42694 1942 aaKnown RBP14.03□□□□□ -0.16
TRAPPC11-201ENST00000334690 CA1P00915 261 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC11-201ENST00000334690 DOCK9Q9BZ29 2069 aa14.03□□□□□ -0.16
TRAPPC11-201ENST00000334690 A0A1B0GWJ7 208 aa14.03□□□□□ -0.16
TRAPPC11-201ENST00000334690 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC11-201ENST00000334690 LMO1P25800 156 aa14.03□□□□□ -0.16
TRAPPC11-201ENST00000334690 FAM90A2PQ658T7 463 aa14.03□□□□□ -0.16
TRAPPC11-201ENST00000334690 RASL11AQ6T310 242 aa14.03□□□□□ -0.16
TRAPPC11-201ENST00000334690 ST6GALNAC6Q969X2 333 aa14.03□□□□□ -0.16
TRAPPC11-201ENST00000334690 NXT2Q9NPJ8 142 aaKnown RBP14.03□□□□□ -0.16
TRAPPC11-201ENST00000334690 DOCK10Q96BY6 2186 aa14.03□□□□□ -0.16
TRAPPC11-201ENST00000334690 PSG1P11464 419 aa14.02□□□□□ -0.16
TRAPPC11-201ENST00000334690 CHCHD1Q96BP2 118 aaKnown RBP14.02□□□□□ -0.16
TRAPPC11-201ENST00000334690 HS3ST6Q96QI5 342 aa14.02□□□□□ -0.16
TRAPPC11-201ENST00000334690 PROK2Q9HC23 129 aa14.02□□□□□ -0.16
TRAPPC11-201ENST00000334690 HBDP02042 147 aa14.02□□□□□ -0.16
TRAPPC11-201ENST00000334690 H0YJW9 148 aa14.02□□□□□ -0.17
TRAPPC11-201ENST00000334690 NUTF2P61970 127 aaKnown RBP14.02□□□□□ -0.17
TRAPPC11-201ENST00000334690 IGHV1-3A0A0C4DH29 117 aa14.02□□□□□ -0.17
TRAPPC11-201ENST00000334690 ADIPOQQ15848 244 aa14.02□□□□□ -0.17
TRAPPC11-201ENST00000334690 OR5AN1Q8NGI8 311 aa14.02□□□□□ -0.17
TRAPPC11-201ENST00000334690 GAFA1Q96PS6 74 aa14.02□□□□□ -0.17
TRAPPC11-201ENST00000334690 MYOD1P15172 320 aa14.01□□□□□ -0.17
TRAPPC11-201ENST00000334690 IGHV3-11P01762 117 aa14.01□□□□□ -0.17
TRAPPC11-201ENST00000334690 LY6G6EA0A0G2JKS1 128 aa14□□□□□ -0.17
TRAPPC11-201ENST00000334690 ZNF474Q6S9Z5 364 aaPredicted RBP14□□□□□ -0.17
TRAPPC11-201ENST00000334690 LINC00469Q8N7U9 141 aa14□□□□□ -0.17
TRAPPC11-201ENST00000334690 TNFRSF18Q9Y5U5 241 aa14□□□□□ -0.17
TRAPPC11-201ENST00000334690 U3KQA8 63 aa14□□□□□ -0.17
TRAPPC11-201ENST00000334690 PMS2P5A8MQ11 134 aa14□□□□□ -0.17
TRAPPC11-201ENST00000334690 F2Z2F3 143 aa14□□□□□ -0.17
TRAPPC11-201ENST00000334690 FAM71F2Q6NXP2 309 aa14□□□□□ -0.17
TRAPPC11-201ENST00000334690 SNAI2O43623 268 aa14□□□□□ -0.17
TRAPPC11-201ENST00000334690 TMEM50AO95807 157 aa14□□□□□ -0.17
TRAPPC11-201ENST00000334690 TCRAP04437 139 aa14□□□□□ -0.17
TRAPPC11-201ENST00000334690 BDP1A6H8Y1 2624 aa14□□□□□ -0.17
TRAPPC11-201ENST00000334690 NIT1Q86X76 327 aa13.99□□□□□ -0.17
TRAPPC11-201ENST00000334690 TRAV21A0A0B4J279 112 aa13.99□□□□□ -0.17
TRAPPC11-201ENST00000334690 C19orf67A6NJJ6 358 aa13.99□□□□□ -0.17
TRAPPC11-201ENST00000334690 C9JQL5 133 aa13.99□□□□□ -0.17
TRAPPC11-201ENST00000334690 RSPO1Q2MKA7 263 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC11-201ENST00000334690 SLC25A39Q9BZJ4 359 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC11-201ENST00000334690 MINOS1Q5TGZ0 78 aa13.99□□□□□ -0.17
TRAPPC11-201ENST00000334690 MINOS1-NBL1R4GNA1 71 aa13.99□□□□□ -0.17
TRAPPC11-201ENST00000334690 DOCK11Q5JSL3 2073 aa13.99□□□□□ -0.17
TRAPPC11-201ENST00000334690 TNFSF13O75888 250 aa13.98□□□□□ -0.17
TRAPPC11-201ENST00000334690 TGFAP01135 160 aa13.98□□□□□ -0.17
TRAPPC11-201ENST00000334690 LINC00205P59089 165 aa13.98□□□□□ -0.17
TRAPPC11-201ENST00000334690 PCNX2A6NKB5 2137 aa13.98□□□□□ -0.17
TRAPPC11-201ENST00000334690 NPFFO15130 113 aa13.98□□□□□ -0.17
TRAPPC11-201ENST00000334690 TPTE2P1Q5T6R2 138 aa13.98□□□□□ -0.17
TRAPPC11-201ENST00000334690 PYY3Q5JQD4 70 aa13.98□□□□□ -0.17
TRAPPC11-201ENST00000334690 A0A0G2JNJ9 132 aa13.98□□□□□ -0.17
TRAPPC11-201ENST00000334690 RNASE2P10153 161 aaKnown RBP13.98□□□□□ -0.17
TRAPPC11-201ENST00000334690 LEPP41159 167 aa13.98□□□□□ -0.17
TRAPPC11-201ENST00000334690 ACTL10Q5JWF8 245 aa13.98□□□□□ -0.17
TRAPPC11-201ENST00000334690 DMRTA1Q5VZB9 504 aa13.98□□□□□ -0.17
TRAPPC11-201ENST00000334690 Q9UFV3 132 aa13.98□□□□□ -0.17
TRAPPC11-201ENST00000334690 ST6GALNAC3Q8NDV1 305 aa13.97□□□□□ -0.17
TRAPPC11-201ENST00000334690 SIGLEC9Q9Y336 463 aa13.97□□□□□ -0.17
TRAPPC11-201ENST00000334690 MEIG1Q5JSS6 88 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms