RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 CD3EP07766 207 aa13.96□□□□□ -0.18
COL9A1-201ENST00000320755 NTF3P20783 257 aa13.96□□□□□ -0.18
COL9A1-201ENST00000320755 APOBEC3AP31941 199 aaPredicted RBP13.96□□□□□ -0.18
COL9A1-201ENST00000320755 PLGLAQ15195 96 aa13.96□□□□□ -0.18
COL9A1-201ENST00000320755 TBR1Q16650 682 aa13.96□□□□□ -0.18
COL9A1-201ENST00000320755 TMEM68Q96MH6 324 aa13.96□□□□□ -0.18
COL9A1-201ENST00000320755 BMPR1BO00238 502 aa13.95□□□□□ -0.18
COL9A1-201ENST00000320755 BRS3P32247 399 aa13.95□□□□□ -0.18
COL9A1-201ENST00000320755 SSBP4Q9BWG4 385 aaPredicted RBP13.95□□□□□ -0.18
COL9A1-201ENST00000320755 TBL2Q9Y4P3 447 aaKnown RBP13.95□□□□□ -0.18
COL9A1-201ENST00000320755 TRBV9A0A0B4J1U6 114 aa13.95□□□□□ -0.18
COL9A1-201ENST00000320755 SMIM27A0A1W2PRY6 76 aa13.95□□□□□ -0.18
COL9A1-201ENST00000320755 APCSP02743 223 aa13.95□□□□□ -0.18
COL9A1-201ENST00000320755 GPR6P46095 362 aaPredicted RBP13.95□□□□□ -0.18
COL9A1-201ENST00000320755 TAS2R60P59551 318 aa13.95□□□□□ -0.18
COL9A1-201ENST00000320755 SLAQ13239 276 aa13.95□□□□□ -0.18
COL9A1-201ENST00000320755 FBXL7Q9UJT9 491 aa13.95□□□□□ -0.18
COL9A1-201ENST00000320755 ASH1LQ9NR48 2969 aaKnown RBP13.95□□□□□ -0.18
COL9A1-201ENST00000320755 Q0VG73 95 aa13.94□□□□□ -0.18
COL9A1-201ENST00000320755 TPTE2P1Q5T6R2 138 aa13.94□□□□□ -0.18
COL9A1-201ENST00000320755 C22orf15Q8WYQ4 148 aa13.94□□□□□ -0.18
COL9A1-201ENST00000320755 SNHG12Q9BXW3 62 aa13.94□□□□□ -0.18
COL9A1-201ENST00000320755 INS-IGF2F8WCM5 200 aa13.94□□□□□ -0.18
COL9A1-201ENST00000320755 MT-ND6P03923 174 aa13.94□□□□□ -0.18
COL9A1-201ENST00000320755 NBEAP1P0C6P0 100 aa13.94□□□□□ -0.18
COL9A1-201ENST00000320755 THAP8Q8NA92 274 aa13.94□□□□□ -0.18
COL9A1-201ENST00000320755 BEND2Q8NDZ0 799 aa13.94□□□□□ -0.18
COL9A1-201ENST00000320755 PERPQ96FX8 193 aa13.94□□□□□ -0.18
COL9A1-201ENST00000320755 KAAG1Q9UBP8 84 aa13.94□□□□□ -0.18
COL9A1-201ENST00000320755 SIGLEC9Q9Y336 463 aa13.94□□□□□ -0.18
COL9A1-201ENST00000320755 IGHV1-3A0A0C4DH29 117 aa13.94□□□□□ -0.18
COL9A1-201ENST00000320755 GPX1P07203 203 aa13.94□□□□□ -0.18
COL9A1-201ENST00000320755 CD24P25063 80 aa13.94□□□□□ -0.18
COL9A1-201ENST00000320755 ZNF835Q9Y2P0 537 aa13.94□□□□□ -0.18
COL9A1-201ENST00000320755 IZUMO1RA6ND01 250 aa13.93□□□□□ -0.18
COL9A1-201ENST00000320755 FSTL3O95633 263 aa13.93□□□□□ -0.18
COL9A1-201ENST00000320755 PRRX1P54821 245 aa13.93□□□□□ -0.18
COL9A1-201ENST00000320755 LYZP61626 148 aa13.93□□□□□ -0.18
COL9A1-201ENST00000320755 FAM71F2Q6NXP2 309 aa13.93□□□□□ -0.18
COL9A1-201ENST00000320755 ZNF841Q6ZN19 808 aa13.93□□□□□ -0.18
COL9A1-201ENST00000320755 ZNF596Q8TC21 504 aa13.93□□□□□ -0.18
COL9A1-201ENST00000320755 RPEQ96AT9 228 aa13.93□□□□□ -0.18
COL9A1-201ENST00000320755 C2orf88Q9BSF0 95 aa13.93□□□□□ -0.18
COL9A1-201ENST00000320755 EPDR1Q9UM22 224 aa13.93□□□□□ -0.18
COL9A1-201ENST00000320755 SVEP1Q4LDE5 3571 aa13.93□□□□□ -0.18
COL9A1-201ENST00000320755 A0A1W2PRD5 423 aa13.93□□□□□ -0.18
COL9A1-201ENST00000320755 A0A1W2PRF3 423 aa13.93□□□□□ -0.18
COL9A1-201ENST00000320755 A0A1W2PRM7 423 aa13.93□□□□□ -0.18
COL9A1-201ENST00000320755 HYPMO75409 117 aa13.93□□□□□ -0.18
COL9A1-201ENST00000320755 NUP35Q8NFH5 326 aa13.93□□□□□ -0.18
COL9A1-201ENST00000320755 ONECUT1Q9UBC0 465 aa13.93□□□□□ -0.18
COL9A1-201ENST00000320755 PPIAL4CA0A0B4J2A2 164 aa13.92□□□□□ -0.18
COL9A1-201ENST00000320755 HLA-DQA1P01909 254 aa13.92□□□□□ -0.18
COL9A1-201ENST00000320755 PPIAL4GP0DN37 164 aa13.92□□□□□ -0.18
COL9A1-201ENST00000320755 ZNF137PP52743 207 aa13.92□□□□□ -0.18
COL9A1-201ENST00000320755 ETFRF1Q6IPR1 90 aa13.92□□□□□ -0.18
COL9A1-201ENST00000320755 PPP1R27Q86WC6 154 aa13.92□□□□□ -0.18
COL9A1-201ENST00000320755 MUC15Q8N387 334 aa13.92□□□□□ -0.18
COL9A1-201ENST00000320755 SCNM1Q9BWG6 230 aa13.92□□□□□ -0.18
COL9A1-201ENST00000320755 NRN1Q9NPD7 142 aa13.92□□□□□ -0.18
COL9A1-201ENST00000320755 A0A1W2PS18 150 aa13.92□□□□□ -0.18
COL9A1-201ENST00000320755 RBP4P02753 201 aa13.92□□□□□ -0.18
COL9A1-201ENST00000320755 C8orf31Q8N9H6 132 aa13.92□□□□□ -0.18
COL9A1-201ENST00000320755 TEX45Q8NA69 505 aa13.92□□□□□ -0.18
COL9A1-201ENST00000320755 ZNF586Q9NXT0 402 aa13.92□□□□□ -0.18
COL9A1-201ENST00000320755 SPTAN1Q13813 2472 aaKnown RBP13.92□□□□□ -0.18
COL9A1-201ENST00000320755 HIGD1CA8MV81 97 aa13.92□□□□□ -0.18
COL9A1-201ENST00000320755 B9A039 149 aa13.92□□□□□ -0.18
COL9A1-201ENST00000320755 BUB1B-PAK6H3BSN5 160 aa13.92□□□□□ -0.18
COL9A1-201ENST00000320755 CNIH1O95406 144 aa13.92□□□□□ -0.18
COL9A1-201ENST00000320755 RBPJQ06330 500 aa13.92□□□□□ -0.18
COL9A1-201ENST00000320755 VAMP8Q9BV40 100 aa13.92□□□□□ -0.18
COL9A1-201ENST00000320755 CLEC7AQ9BXN2 247 aa13.92□□□□□ -0.18
COL9A1-201ENST00000320755 TCF24Q7RTU0 167 aa13.91□□□□□ -0.18
COL9A1-201ENST00000320755 NEU1Q99519 415 aa13.91□□□□□ -0.18
COL9A1-201ENST00000320755 S4R3C0 116 aa13.91□□□□□ -0.18
COL9A1-201ENST00000320755 DIRC3C9JPN6 131 aa13.91□□□□□ -0.18
COL9A1-201ENST00000320755 ESDP10768 282 aa13.91□□□□□ -0.18
COL9A1-201ENST00000320755 COMPP49747 757 aaPredicted RBP13.91□□□□□ -0.18
COL9A1-201ENST00000320755 GDF5OSQ5U4N7 250 aa13.91□□□□□ -0.18
COL9A1-201ENST00000320755 HILPDAQ9Y5L2 63 aa13.91□□□□□ -0.18
COL9A1-201ENST00000320755 TRAV8-1A0A0A6YYK1 113 aa13.9□□□□□ -0.18
COL9A1-201ENST00000320755 KIR2DL5BA0A0G2JN68 375 aa13.9□□□□□ -0.18
COL9A1-201ENST00000320755 KIR2DL5BA0A0G2JPC4 375 aa13.9□□□□□ -0.18
COL9A1-201ENST00000320755 IGLV1-47P01700 117 aa13.9□□□□□ -0.18
COL9A1-201ENST00000320755 BATFQ16520 125 aa13.9□□□□□ -0.18
COL9A1-201ENST00000320755 KIR2DL5AQ8N109 375 aa13.9□□□□□ -0.18
COL9A1-201ENST00000320755 OR2D3Q8NGH3 330 aa13.9□□□□□ -0.18
COL9A1-201ENST00000320755 SPTBN4Q9H254 2564 aa13.9□□□□□ -0.18
COL9A1-201ENST00000320755 ASCL2Q99929 193 aa13.9□□□□□ -0.18
COL9A1-201ENST00000320755 PSG1P11464 419 aa13.89□□□□□ -0.19
COL9A1-201ENST00000320755 LINC00322Q6ZN03 302 aaPredicted RBP13.89□□□□□ -0.19
COL9A1-201ENST00000320755 KIR3DL3Q8N743 410 aa13.89□□□□□ -0.19
COL9A1-201ENST00000320755 SRSF12Q8WXF0 261 aaKnown RBP13.89□□□□□ -0.19
COL9A1-201ENST00000320755 KCNS1Q96KK3 526 aa13.89□□□□□ -0.19
COL9A1-201ENST00000320755 M0R143 59 aa13.89□□□□□ -0.19
COL9A1-201ENST00000320755 CRYGCP07315 174 aa13.89□□□□□ -0.19
COL9A1-201ENST00000320755 ARF6P62330 175 aa13.89□□□□□ -0.19
COL9A1-201ENST00000320755 GRAMD2BQ96HH9 432 aa13.89□□□□□ -0.19
COL9A1-201ENST00000320755 CASP6P55212 293 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms